RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 TRIM36Q9NQ86 728 aa12.79□□□□□ -0.36
NME3-211ENST00000568561 SIRT7Q9NRC8 400 aa12.79□□□□□ -0.36
NME3-211ENST00000568561 CENPMQ9NSP4 180 aa12.79□□□□□ -0.36
NME3-211ENST00000568561 KCNG2Q9UJ96 466 aa12.79□□□□□ -0.36
NME3-211ENST00000568561 RPUSD1Q9UJJ7 312 aaKnown RBP12.79□□□□□ -0.36
NME3-211ENST00000568561 TET2Q6N021 2002 aaPredicted RBP12.78□□□□□ -0.36
NME3-211ENST00000568561 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.78□□□□□ -0.36
NME3-211ENST00000568561 SLC22A31A6NKX4 558 aa12.78□□□□□ -0.36
NME3-211ENST00000568561 NDUFA2O43678 99 aa12.78□□□□□ -0.36
NME3-211ENST00000568561 GYPBP06028 91 aa12.78□□□□□ -0.36
NME3-211ENST00000568561 SMIM11AP58511 58 aa12.78□□□□□ -0.36
NME3-211ENST00000568561 WDR38Q5JTN6 314 aa12.78□□□□□ -0.36
NME3-211ENST00000568561 ZDHHC21Q8IVQ6 265 aa12.78□□□□□ -0.36
NME3-211ENST00000568561 C11orf53Q8IXP5 236 aa12.78□□□□□ -0.36
NME3-211ENST00000568561 ZNF511Q8NB15 262 aa12.78□□□□□ -0.36
NME3-211ENST00000568561 PLPP7Q8NBV4 271 aa12.78□□□□□ -0.36
NME3-211ENST00000568561 OR9Q2Q8NGE9 314 aa12.78□□□□□ -0.36
NME3-211ENST00000568561 OR8D4Q8NGM9 314 aa12.78□□□□□ -0.36
NME3-211ENST00000568561 FAM110DQ8TAY7 271 aaPredicted RBP12.78□□□□□ -0.36
NME3-211ENST00000568561 SLAMF6Q96DU3 332 aa12.78□□□□□ -0.36
NME3-211ENST00000568561 PYURFQ96I23 114 aa12.78□□□□□ -0.36
NME3-211ENST00000568561 CCDC134Q9H6E4 229 aa12.78□□□□□ -0.36
NME3-211ENST00000568561 CDH10Q9Y6N8 788 aa12.78□□□□□ -0.36
NME3-211ENST00000568561 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.77□□□□□ -0.37
NME3-211ENST00000568561 TBX1O43435 398 aa12.77□□□□□ -0.37
NME3-211ENST00000568561 IDH3BO43837 385 aa12.77□□□□□ -0.37
NME3-211ENST00000568561 GMNNO75496 209 aa12.77□□□□□ -0.37
NME3-211ENST00000568561 CLPXO76031 633 aa12.77□□□□□ -0.37
NME3-211ENST00000568561 LHBP01229 141 aa12.77□□□□□ -0.37
NME3-211ENST00000568561 TFF1P04155 84 aa12.77□□□□□ -0.37
NME3-211ENST00000568561 SELLP14151 372 aa12.77□□□□□ -0.37
NME3-211ENST00000568561 GMFBP60983 142 aa12.77□□□□□ -0.37
NME3-211ENST00000568561 RPL15P61313 204 aaKnown RBP12.77□□□□□ -0.37
NME3-211ENST00000568561 TSPAN31Q12999 210 aa12.77□□□□□ -0.37
NME3-211ENST00000568561 KLRD1Q13241 179 aa12.77□□□□□ -0.37
NME3-211ENST00000568561 IKZF1Q13422 519 aa12.77□□□□□ -0.37
NME3-211ENST00000568561 TAF13Q15543 124 aa12.77□□□□□ -0.37
NME3-211ENST00000568561 CDONQ4KMG0 1287 aa12.77□□□□□ -0.37
NME3-211ENST00000568561 TEX36Q5VZQ5 186 aa12.77□□□□□ -0.37
NME3-211ENST00000568561 PNKDQ8N490 385 aa12.77□□□□□ -0.37
NME3-211ENST00000568561 SLC37A3Q8NCC5 494 aa12.77□□□□□ -0.37
NME3-211ENST00000568561 OR2T4Q8NH00 348 aa12.77□□□□□ -0.37
NME3-211ENST00000568561 OR8S1Q8NH09 359 aa12.77□□□□□ -0.37
NME3-211ENST00000568561 GNPDA2Q8TDQ7 276 aa12.77□□□□□ -0.37
NME3-211ENST00000568561 DDOQ99489 341 aa12.77□□□□□ -0.37
NME3-211ENST00000568561 CNTD2Q9H8S5 307 aa12.77□□□□□ -0.37
NME3-211ENST00000568561 C14orf119Q9NWQ9 140 aa12.77□□□□□ -0.37
NME3-211ENST00000568561 FAM96BQ9Y3D0 163 aa12.77□□□□□ -0.37
NME3-211ENST00000568561 ANKRD30BLA7E2S9 258 aa12.76□□□□□ -0.37
NME3-211ENST00000568561 ACOT8O14734 319 aa12.76□□□□□ -0.37
NME3-211ENST00000568561 ECDO95905 644 aaPredicted RBP12.76□□□□□ -0.37
NME3-211ENST00000568561 FABP3P05413 133 aa12.76□□□□□ -0.37
NME3-211ENST00000568561 IFNGR2P38484 337 aa12.76□□□□□ -0.37
NME3-211ENST00000568561 ENTPD1P49961 510 aa12.76□□□□□ -0.37
NME3-211ENST00000568561 GFOD2Q3B7J2 385 aa12.76□□□□□ -0.37
NME3-211ENST00000568561 HIST2H2BDQ6DRA6 164 aa12.76□□□□□ -0.37
NME3-211ENST00000568561 DHRS7BQ6IAN0 325 aaPredicted RBP12.76□□□□□ -0.37
NME3-211ENST00000568561 SLC16A9Q7RTY1 509 aa12.76□□□□□ -0.37
NME3-211ENST00000568561 SPERTQ8NA61 448 aa12.76□□□□□ -0.37
NME3-211ENST00000568561 ZSCAN4Q8NAM6 433 aaPredicted RBP12.76□□□□□ -0.37
NME3-211ENST00000568561 OR52L1Q8NGH7 329 aa12.76□□□□□ -0.37
NME3-211ENST00000568561 MCUR1Q96AQ8 359 aa12.76□□□□□ -0.37
NME3-211ENST00000568561 KCNJ15Q99712 375 aa12.76□□□□□ -0.37
NME3-211ENST00000568561 BTBD10Q9BSF8 475 aa12.76□□□□□ -0.37
NME3-211ENST00000568561 DPAGT1Q9H3H5 408 aa12.76□□□□□ -0.37
NME3-211ENST00000568561 GORASP2Q9H8Y8 452 aa12.76□□□□□ -0.37
NME3-211ENST00000568561 ZNRD1Q9P1U0 126 aa12.76□□□□□ -0.37
NME3-211ENST00000568561 KAAG1Q9UBP8 84 aa12.76□□□□□ -0.37
NME3-211ENST00000568561 KPTNQ9Y664 436 aa12.76□□□□□ -0.37
NME3-211ENST00000568561 A0A1B0GVI7 797 aa12.75□□□□□ -0.37
NME3-211ENST00000568561 ARPC2O15144 300 aa12.75□□□□□ -0.37
NME3-211ENST00000568561 XRCC2O43543 280 aa12.75□□□□□ -0.37
NME3-211ENST00000568561 ANXA2P07355 339 aaKnown RBP12.75□□□□□ -0.37
NME3-211ENST00000568561 CLUP10909 449 aa12.75□□□□□ -0.37
NME3-211ENST00000568561 CX3CR1P49238 355 aa12.75□□□□□ -0.37
NME3-211ENST00000568561 FAM3AP98173 230 aa12.75□□□□□ -0.37
NME3-211ENST00000568561 CRMP1Q14194 572 aa12.75□□□□□ -0.37
NME3-211ENST00000568561 MICBQ29980 383 aa12.75□□□□□ -0.37
NME3-211ENST00000568561 WDR82Q6UXN9 313 aa12.75□□□□□ -0.37
NME3-211ENST00000568561 GDPGP1Q6ZNW5 385 aa12.75□□□□□ -0.37
NME3-211ENST00000568561 DPY19L4Q7Z388 723 aa12.75□□□□□ -0.37
NME3-211ENST00000568561 LY6G5BQ8NDX9 201 aa12.75□□□□□ -0.37
NME3-211ENST00000568561 OR1M1Q8NGA1 313 aa12.75□□□□□ -0.37
NME3-211ENST00000568561 OR5T2Q8NGG2 359 aa12.75□□□□□ -0.37
NME3-211ENST00000568561 OR4C15Q8NGM1 316 aa12.75□□□□□ -0.37
NME3-211ENST00000568561 MYLK2Q9H1R3 596 aa12.75□□□□□ -0.37
NME3-211ENST00000568561 TBC1D23Q9NUY8 699 aa12.75□□□□□ -0.37
NME3-211ENST00000568561 DNAJC27Q9NZQ0 273 aa12.75□□□□□ -0.37
NME3-211ENST00000568561 MAGEL2Q9UJ55 1249 aa12.75□□□□□ -0.37
NME3-211ENST00000568561 VPREB3Q9UKI3 123 aa12.75□□□□□ -0.37
NME3-211ENST00000568561 ZNF816-ZNF321PA0A0X1KG74 233 aa12.74□□□□□ -0.37
NME3-211ENST00000568561 DHRS12A0PJE2 317 aa12.74□□□□□ -0.37
NME3-211ENST00000568561 ZNF878C9JN71 531 aa12.74□□□□□ -0.37
NME3-211ENST00000568561 RNASEK-C17orf49H0YIS7 233 aa12.74□□□□□ -0.37
NME3-211ENST00000568561 ZNF593O00488 134 aaPredicted RBP12.74□□□□□ -0.37
NME3-211ENST00000568561 FBP1P09467 338 aa12.74□□□□□ -0.37
NME3-211ENST00000568561 SPI1P17947 270 aa12.74□□□□□ -0.37
NME3-211ENST00000568561 AMY2BP19961 511 aa12.74□□□□□ -0.37
NME3-211ENST00000568561 FMO3P31513 532 aa12.74□□□□□ -0.37
NME3-211ENST00000568561 EGR3Q06889 387 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms