RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 LYNP07948 512 aa4□□□□□ -1.77
CLK3-219ENST00000567805 H2BFMP0C1H6 154 aa4□□□□□ -1.77
CLK3-219ENST00000567805 PRR23D2P0DMB1 279 aaPredicted RBP4□□□□□ -1.77
CLK3-219ENST00000567805 PPIAL4GP0DN37 164 aa4□□□□□ -1.77
CLK3-219ENST00000567805 SLC2A1P11166 492 aa4□□□□□ -1.77
CLK3-219ENST00000567805 POU1F1P28069 291 aa4□□□□□ -1.77
CLK3-219ENST00000567805 PSMB10P40306 273 aa4□□□□□ -1.77
CLK3-219ENST00000567805 PMELP40967 661 aa4□□□□□ -1.77
CLK3-219ENST00000567805 OPRL1P41146 370 aa4□□□□□ -1.77
CLK3-219ENST00000567805 PITPNBP48739 271 aa4□□□□□ -1.77
CLK3-219ENST00000567805 CX3CR1P49238 355 aa4□□□□□ -1.77
CLK3-219ENST00000567805 NPY4RP50391 375 aa4□□□□□ -1.77
CLK3-219ENST00000567805 PRKXP51817 358 aa4□□□□□ -1.77
CLK3-219ENST00000567805 ZNF121P58317 390 aaPredicted RBP4□□□□□ -1.77
CLK3-219ENST00000567805 ACTG1P63261 375 aa4□□□□□ -1.77
CLK3-219ENST00000567805 CBX1P83916 185 aa4□□□□□ -1.77
CLK3-219ENST00000567805 FAM3AP98173 230 aa4□□□□□ -1.77
CLK3-219ENST00000567805 CDK5Q00535 292 aa4□□□□□ -1.77
CLK3-219ENST00000567805 PAX2Q02962 417 aa4□□□□□ -1.77
CLK3-219ENST00000567805 PAX8Q06710 450 aa4□□□□□ -1.77
CLK3-219ENST00000567805 GINS1Q14691 196 aa4□□□□□ -1.77
CLK3-219ENST00000567805 MPPED2Q15777 294 aa4□□□□□ -1.77
CLK3-219ENST00000567805 SNCBQ16143 134 aa4□□□□□ -1.77
CLK3-219ENST00000567805 TIGD6Q17RP2 521 aa4□□□□□ -1.77
CLK3-219ENST00000567805 SLC35D3Q5M8T2 416 aa4□□□□□ -1.77
CLK3-219ENST00000567805 PRAMEF6Q5VXH4 476 aa4□□□□□ -1.77
CLK3-219ENST00000567805 PLBD1Q6P4A8 553 aa4□□□□□ -1.77
CLK3-219ENST00000567805 BTNL3Q6UXE8 466 aa4□□□□□ -1.77
CLK3-219ENST00000567805 LRRN1Q6UXK5 716 aa4□□□□□ -1.77
CLK3-219ENST00000567805 DCDC5Q6ZRR9 648 aa4□□□□□ -1.77
CLK3-219ENST00000567805 SPATC1Q76KD6 591 aa4□□□□□ -1.77
CLK3-219ENST00000567805 SLC16A9Q7RTY1 509 aa4□□□□□ -1.77
CLK3-219ENST00000567805 TIGD4Q8IY51 512 aa4□□□□□ -1.77
CLK3-219ENST00000567805 HS3ST5Q8IZT8 346 aa4□□□□□ -1.77
CLK3-219ENST00000567805 FTMTQ8N4E7 242 aa4□□□□□ -1.77
CLK3-219ENST00000567805 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4□□□□□ -1.77
CLK3-219ENST00000567805 PAPD5Q8NDF8 572 aaKnown RBP4□□□□□ -1.77
CLK3-219ENST00000567805 OR8B3Q8NGG8 313 aa4□□□□□ -1.77
CLK3-219ENST00000567805 OR56B2PQ8NGI1 322 aa4□□□□□ -1.77
CLK3-219ENST00000567805 OR6N2Q8NGY6 317 aa4□□□□□ -1.77
CLK3-219ENST00000567805 OTOSQ8NHW6 89 aa4□□□□□ -1.77
CLK3-219ENST00000567805 RNF133Q8WVZ7 376 aa4□□□□□ -1.77
CLK3-219ENST00000567805 RAB40AQ8WXH6 277 aa4□□□□□ -1.77
CLK3-219ENST00000567805 DVL3Q92997 716 aaPredicted RBP4□□□□□ -1.77
CLK3-219ENST00000567805 OTULINQ96BN8 352 aa4□□□□□ -1.77
CLK3-219ENST00000567805 SLC7A6OSQ96CW6 309 aaPredicted RBP4□□□□□ -1.77
CLK3-219ENST00000567805 ZMYND19Q96E35 227 aaPredicted RBP4□□□□□ -1.77
CLK3-219ENST00000567805 NRBF2Q96F24 287 aa4□□□□□ -1.77
CLK3-219ENST00000567805 NEIL1Q96FI4 390 aaPredicted RBP4□□□□□ -1.77
CLK3-219ENST00000567805 REEP6Q96HR9 211 aa4□□□□□ -1.77
CLK3-219ENST00000567805 OR8B2Q96RD0 313 aa4□□□□□ -1.77
CLK3-219ENST00000567805 ABHD6Q9BV23 337 aa4□□□□□ -1.77
CLK3-219ENST00000567805 TEX12Q9BXU0 123 aa4□□□□□ -1.77
CLK3-219ENST00000567805 OR10A2Q9H208 303 aa4□□□□□ -1.77
CLK3-219ENST00000567805 OR51V1Q9H2C8 321 aa4□□□□□ -1.77
CLK3-219ENST00000567805 MED20Q9H944 212 aa4□□□□□ -1.77
CLK3-219ENST00000567805 UFSP2Q9NUQ7 469 aa4□□□□□ -1.77
CLK3-219ENST00000567805 C14orf119Q9NWQ9 140 aa4□□□□□ -1.77
CLK3-219ENST00000567805 KIF17Q9P2E2 1029 aa4□□□□□ -1.77
CLK3-219ENST00000567805 RNF7Q9UBF6 113 aa4□□□□□ -1.77
CLK3-219ENST00000567805 DNAJB9Q9UBS3 223 aa4□□□□□ -1.77
CLK3-219ENST00000567805 CLN8Q9UBY8 286 aa4□□□□□ -1.77
CLK3-219ENST00000567805 ZNF391Q9UJN7 358 aa4□□□□□ -1.77
CLK3-219ENST00000567805 NUP50Q9UKX7 468 aa4□□□□□ -1.77
CLK3-219ENST00000567805 POMPQ9Y244 141 aa4□□□□□ -1.77
CLK3-219ENST00000567805 N6AMT1Q9Y5N5 214 aa4□□□□□ -1.77
CLK3-219ENST00000567805 KIR2DS1A0A191URI9 304 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 hCG_38984A0A1B0GV85 526 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 hCG_1807616A0A1W2PRN6 198 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 TMEM89A2RUT3 159 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 C5orf63A6NC05 138 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 OOEPA6NGQ2 149 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 A6NLC8 198 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 LGALS8O00214 317 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 GSC2O15499 205 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 NDUFA2O43678 99 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 ENSAO43768 121 aaKnown RBP3.99□□□□□ -1.77
CLK3-219ENST00000567805 TIPRLO75663 272 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 GRPP07492 148 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 PRKACGP22612 351 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 SLC2A5P22732 501 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 ANOS1P23352 680 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 CD80P33681 288 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 COMPP49747 757 aaPredicted RBP3.99□□□□□ -1.77
CLK3-219ENST00000567805 RASSF2P50749 326 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 OR8B8Q15620 311 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 KLHL12Q53G59 568 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 KLF17Q5JT82 389 aaPredicted RBP3.99□□□□□ -1.77
CLK3-219ENST00000567805 FAM201AQ5SY85 155 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 CD276Q5ZPR3 534 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 WDR25Q64LD2 544 aaPredicted RBP3.99□□□□□ -1.77
CLK3-219ENST00000567805 KCTD18Q6PI47 426 aaPredicted RBP3.99□□□□□ -1.77
CLK3-219ENST00000567805 C12orf54Q6X4T0 127 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 RBMS3Q6XE24 437 aaKnown RBP3.99□□□□□ -1.77
CLK3-219ENST00000567805 ZNF841Q6ZN19 808 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 FAM57BQ71RH2 274 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 DOK3Q7L591 496 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 PRSS45Q7RTY3 260 aa3.99□□□□□ -1.77
CLK3-219ENST00000567805 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.99□□□□□ -1.77
CLK3-219ENST00000567805 CPOQ8IVL8 374 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms