RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 OOEPA6NGQ2 149 aa11.84□□□□□ -0.51
COMMD4-216ENST00000567023 C22orf46C9J442 243 aa11.84□□□□□ -0.51
COMMD4-216ENST00000567023 ENSAO43768 121 aaKnown RBP11.84□□□□□ -0.51
COMMD4-216ENST00000567023 FKBP6O75344 327 aa11.84□□□□□ -0.51
COMMD4-216ENST00000567023 GLCEO94923 617 aa11.84□□□□□ -0.51
COMMD4-216ENST00000567023 CST1P01037 141 aa11.84□□□□□ -0.51
COMMD4-216ENST00000567023 GSTT1P30711 240 aa11.84□□□□□ -0.51
COMMD4-216ENST00000567023 GRK5P34947 590 aa11.84□□□□□ -0.51
COMMD4-216ENST00000567023 HOXA4Q00056 320 aaPredicted RBP11.84□□□□□ -0.51
COMMD4-216ENST00000567023 SLC9A3R2Q15599 337 aa11.84□□□□□ -0.51
COMMD4-216ENST00000567023 SFRP4Q6FHJ7 346 aaPredicted RBP11.84□□□□□ -0.51
COMMD4-216ENST00000567023 SLC16A9Q7RTY1 509 aa11.84□□□□□ -0.51
COMMD4-216ENST00000567023 DPY19L4Q7Z388 723 aa11.84□□□□□ -0.51
COMMD4-216ENST00000567023 TIGD4Q8IY51 512 aa11.84□□□□□ -0.51
COMMD4-216ENST00000567023 GCSAMQ8N6F7 178 aa11.84□□□□□ -0.51
COMMD4-216ENST00000567023 OR52H1Q8NGJ2 320 aa11.84□□□□□ -0.51
COMMD4-216ENST00000567023 TEX47Q8TBZ9 253 aa11.84□□□□□ -0.51
COMMD4-216ENST00000567023 GIPC3Q8TF64 312 aa11.84□□□□□ -0.51
COMMD4-216ENST00000567023 SGK3Q96BR1 496 aa11.84□□□□□ -0.51
COMMD4-216ENST00000567023 INTS14Q96SY0 518 aa11.84□□□□□ -0.51
COMMD4-216ENST00000567023 ABHD6Q9BV23 337 aa11.84□□□□□ -0.51
COMMD4-216ENST00000567023 ZNF747Q9BV97 191 aa11.84□□□□□ -0.51
COMMD4-216ENST00000567023 YY1AP1Q9H869 796 aa11.84□□□□□ -0.51
COMMD4-216ENST00000567023 C14orf119Q9NWQ9 140 aa11.84□□□□□ -0.51
COMMD4-216ENST00000567023 ERVK-18Q9QC07 812 aa11.84□□□□□ -0.51
COMMD4-216ENST00000567023 CTSZQ9UBR2 303 aa11.84□□□□□ -0.51
COMMD4-216ENST00000567023 TRAV40A0A0B4J280 105 aa11.83□□□□□ -0.52
COMMD4-216ENST00000567023 FAM183AA6NL82 134 aa11.83□□□□□ -0.52
COMMD4-216ENST00000567023 ANKRD30BLA7E2S9 258 aa11.83□□□□□ -0.52
COMMD4-216ENST00000567023 C3orf80F5H4A9 247 aa11.83□□□□□ -0.52
COMMD4-216ENST00000567023 GRPP07492 148 aa11.83□□□□□ -0.52
COMMD4-216ENST00000567023 CFL1P23528 166 aaKnown RBP11.83□□□□□ -0.52
COMMD4-216ENST00000567023 HSD11B1P28845 292 aa11.83□□□□□ -0.52
COMMD4-216ENST00000567023 OPRL1P41146 370 aa11.83□□□□□ -0.52
COMMD4-216ENST00000567023 CX3CR1P49238 355 aa11.83□□□□□ -0.52
COMMD4-216ENST00000567023 FGF12P61328 243 aa11.83□□□□□ -0.52
COMMD4-216ENST00000567023 EIF2B1Q14232 305 aaKnown RBP11.83□□□□□ -0.52
COMMD4-216ENST00000567023 TEX36Q5VZQ5 186 aa11.83□□□□□ -0.52
COMMD4-216ENST00000567023 CCDC121Q6ZUS5 278 aa11.83□□□□□ -0.52
COMMD4-216ENST00000567023 SHFQ7M4L6 423 aa11.83□□□□□ -0.52
COMMD4-216ENST00000567023 C11orf53Q8IXP5 236 aa11.83□□□□□ -0.52
COMMD4-216ENST00000567023 UTP4Q969X6 686 aaKnown RBP11.83□□□□□ -0.52
COMMD4-216ENST00000567023 DUS3LQ96G46 650 aaKnown RBP11.83□□□□□ -0.52
COMMD4-216ENST00000567023 DUX5Q96PT3 197 aa11.83□□□□□ -0.52
COMMD4-216ENST00000567023 MED20Q9H944 212 aa11.83□□□□□ -0.52
COMMD4-216ENST00000567023 RNPEPL1Q9HAU8 725 aa11.83□□□□□ -0.52
COMMD4-216ENST00000567023 C1orf123Q9NWV4 160 aa11.83□□□□□ -0.52
COMMD4-216ENST00000567023 KAAG1Q9UBP8 84 aa11.83□□□□□ -0.52
COMMD4-216ENST00000567023 PKD1L1Q8TDX9 2849 aa11.82□□□□□ -0.52
COMMD4-216ENST00000567023 IGHV3OR16-10A0A075B7F0 116 aa11.82□□□□□ -0.52
COMMD4-216ENST00000567023 hCG_38984A0A1B0GV85 526 aa11.82□□□□□ -0.52
COMMD4-216ENST00000567023 H3BN98 237 aa11.82□□□□□ -0.52
COMMD4-216ENST00000567023 TIPRLO75663 272 aa11.82□□□□□ -0.52
COMMD4-216ENST00000567023 ANXA2P07355 339 aaKnown RBP11.82□□□□□ -0.52
COMMD4-216ENST00000567023 MMP9P14780 707 aa11.82□□□□□ -0.52
COMMD4-216ENST00000567023 CFHR2P36980 270 aa11.82□□□□□ -0.52
COMMD4-216ENST00000567023 ZNF121P58317 390 aaPredicted RBP11.82□□□□□ -0.52
COMMD4-216ENST00000567023 CBX1P83916 185 aa11.82□□□□□ -0.52
COMMD4-216ENST00000567023 OR8B8Q15620 311 aa11.82□□□□□ -0.52
COMMD4-216ENST00000567023 TIGD6Q17RP2 521 aa11.82□□□□□ -0.52
COMMD4-216ENST00000567023 C1orf146Q5VVC0 180 aa11.82□□□□□ -0.52
COMMD4-216ENST00000567023 ZNF826PQ6ZT77 177 aa11.82□□□□□ -0.52
COMMD4-216ENST00000567023 SPATC1Q76KD6 591 aa11.82□□□□□ -0.52
COMMD4-216ENST00000567023 TMEM179BQ7Z7N9 219 aa11.82□□□□□ -0.52
COMMD4-216ENST00000567023 FAM90A1Q86YD7 464 aa11.82□□□□□ -0.52
COMMD4-216ENST00000567023 ERI1Q8IV48 349 aaKnown RBP11.82□□□□□ -0.52
COMMD4-216ENST00000567023 OR6N2Q8NGY6 317 aa11.82□□□□□ -0.52
COMMD4-216ENST00000567023 REEP6Q96HR9 211 aa11.82□□□□□ -0.52
COMMD4-216ENST00000567023 TECTBQ96PL2 329 aa11.82□□□□□ -0.52
COMMD4-216ENST00000567023 AMELYQ99218 206 aa11.82□□□□□ -0.52
COMMD4-216ENST00000567023 RGCCQ9H4X1 137 aa11.82□□□□□ -0.52
COMMD4-216ENST00000567023 ZNF319Q9P2F9 582 aa11.82□□□□□ -0.52
COMMD4-216ENST00000567023 DNAJB9Q9UBS3 223 aa11.82□□□□□ -0.52
COMMD4-216ENST00000567023 N6AMT1Q9Y5N5 214 aa11.82□□□□□ -0.52
COMMD4-216ENST00000567023 SOX21Q9Y651 276 aaPredicted RBP11.82□□□□□ -0.52
COMMD4-216ENST00000567023 A6NLC8 198 aa11.81□□□□□ -0.52
COMMD4-216ENST00000567023 POM121CA8CG34 1229 aa11.81□□□□□ -0.52
COMMD4-216ENST00000567023 ZNF879B4DU55 563 aa11.81□□□□□ -0.52
COMMD4-216ENST00000567023 P2RY10O00398 339 aa11.81□□□□□ -0.52
COMMD4-216ENST00000567023 EBAG9O00559 213 aa11.81□□□□□ -0.52
COMMD4-216ENST00000567023 TBX1O43435 398 aa11.81□□□□□ -0.52
COMMD4-216ENST00000567023 ADAM20O43506 726 aa11.81□□□□□ -0.52
COMMD4-216ENST00000567023 SPRY1O43609 319 aaPredicted RBP11.81□□□□□ -0.52
COMMD4-216ENST00000567023 FCN3O75636 299 aa11.81□□□□□ -0.52
COMMD4-216ENST00000567023 MUC1P15941 1255 aaPredicted RBP11.81□□□□□ -0.52
COMMD4-216ENST00000567023 PAICSP22234 425 aaKnown RBP11.81□□□□□ -0.52
COMMD4-216ENST00000567023 IL13RA1P78552 427 aa11.81□□□□□ -0.52
COMMD4-216ENST00000567023 CDK5Q00535 292 aa11.81□□□□□ -0.52
COMMD4-216ENST00000567023 SNCBQ16143 134 aa11.81□□□□□ -0.52
COMMD4-216ENST00000567023 KLHL12Q53G59 568 aa11.81□□□□□ -0.52
COMMD4-216ENST00000567023 GPR157Q5UAW9 335 aa11.81□□□□□ -0.52
COMMD4-216ENST00000567023 C16orf87Q6PH81 154 aa11.81□□□□□ -0.52
COMMD4-216ENST00000567023 SHISA2Q6UWI4 295 aa11.81□□□□□ -0.52
COMMD4-216ENST00000567023 WDR86Q86TI4 376 aa11.81□□□□□ -0.52
COMMD4-216ENST00000567023 IQCF1Q8N6M8 205 aa11.81□□□□□ -0.52
COMMD4-216ENST00000567023 PNLDC1Q8NA58 520 aaKnown RBP11.81□□□□□ -0.52
COMMD4-216ENST00000567023 CSNK2A3Q8NEV1 391 aa11.81□□□□□ -0.52
COMMD4-216ENST00000567023 OR8S1Q8NH09 359 aa11.81□□□□□ -0.52
COMMD4-216ENST00000567023 OTOSQ8NHW6 89 aa11.81□□□□□ -0.52
COMMD4-216ENST00000567023 TLNRD1Q9H1K6 362 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms