RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 GABARAPL3Q9BY60 117 aa2.6□□□□□ -1.99
HERPUD1-211ENST00000566550 POLR2J2Q9GZM3 115 aaKnown RBP2.6□□□□□ -1.99
HERPUD1-211ENST00000566550 NXF2Q9GZY0 626 aaKnown RBP2.6□□□□□ -1.99
HERPUD1-211ENST00000566550 POLR2J3Q9H1A7 115 aaKnown RBP2.6□□□□□ -1.99
HERPUD1-211ENST00000566550 C20orf85Q9H1P6 137 aa2.6□□□□□ -1.99
HERPUD1-211ENST00000566550 SRMSQ9H3Y6 488 aa2.6□□□□□ -1.99
HERPUD1-211ENST00000566550 PTGES2Q9H7Z7 377 aa2.6□□□□□ -1.99
HERPUD1-211ENST00000566550 FGFR1OP2Q9NVK5 253 aa2.6□□□□□ -1.99
HERPUD1-211ENST00000566550 DPM3Q9P2X0 92 aa2.6□□□□□ -1.99
HERPUD1-211ENST00000566550 SHPKQ9UHJ6 478 aa2.6□□□□□ -1.99
HERPUD1-211ENST00000566550 TRMT112Q9UI30 125 aaKnown RBP2.6□□□□□ -1.99
HERPUD1-211ENST00000566550 CFL2Q9Y281 166 aa2.6□□□□□ -1.99
HERPUD1-211ENST00000566550 LRRC42Q9Y546 428 aa2.6□□□□□ -1.99
HERPUD1-211ENST00000566550 SLC25A15Q9Y619 301 aa2.6□□□□□ -1.99
HERPUD1-211ENST00000566550 MRPS18BQ9Y676 258 aaKnown RBP2.6□□□□□ -1.99
HERPUD1-211ENST00000566550 STYXL1Q9Y6J8 313 aa2.6□□□□□ -1.99
HERPUD1-211ENST00000566550 REREQ9P2R6 1566 aa2.6□□□□□ -1.99
HERPUD1-211ENST00000566550 DHX57Q6P158 1386 aaKnown RBP2.6□□□□□ -1.99
HERPUD1-211ENST00000566550 TIAM1Q13009 1591 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 IGLV7-46A0A075B6I9 117 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 PRR23AA6NEV1 266 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 VGLL3A8MV65 326 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 C9J4A7 227 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 LRRN3E7EW58 273 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 FAM72CH0Y354 149 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 M0QZ92 97 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 M0R1B8 84 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 XKRYO14609 159 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 CDX4O14627 284 aaPredicted RBP2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 INSIG1O15503 277 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 CDC40O60508 579 aaKnown RBP eCLIP2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 VENTXO95231 258 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 MPZL1O95297 269 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 IFNA6P05013 189 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 LIMS3P0CW19 117 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 LIMS4P0CW20 117 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 OR5H8P0DN80 308 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 PGAM2P15259 253 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 F2RP25116 425 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 LOXP28300 417 aaPredicted RBP2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 PPICP45877 212 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 GDI2P50395 445 aaKnown RBP2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 OR12D2P58182 307 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 ZNF121P58317 390 aaPredicted RBP2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 ACTBP60709 375 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 RAB8AP61006 207 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 MAGOHP61326 146 aaKnown RBP2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 B2MP61769 119 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 PPP1CBP62140 327 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 ACTG1P63261 375 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 IRX1P78414 480 aaPredicted RBP2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 CD47Q08722 323 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 AQP6Q13520 282 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 RUNX3Q13761 415 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 ARFRP1Q13795 201 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 TMEM249Q2WGJ8 235 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 DNAL1Q4LDG9 190 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 PDZD11Q5EBL8 140 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 FAM72AQ5TYM5 149 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 RUSC1-AS1Q66K80 236 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 FRMPD2BQ6IN97 320 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 C11orf71Q6IPW1 123 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 FAM72DQ6L9T8 149 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 NIPAL1Q6NVV3 410 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 DRAM2Q6UX65 266 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 BAIAP2L2Q6UXY1 529 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 FAM19A1Q7Z5A9 133 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 FAM72BQ86X60 149 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 ENTHD1Q8IYW4 607 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 TMEM61Q8N0U2 210 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 Q8N402 240 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 CHST4Q8NCG5 386 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 GPR26Q8NDV2 337 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 OR51S1Q8NGJ8 323 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 OR5D18Q8NGL1 313 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 DYNC2LI1Q8TCX1 351 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 BLOC1S5Q8TDH9 187 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 TMEM190Q8WZ59 177 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 ESR2Q92731 530 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 ZNF501Q96CX3 271 aaPredicted RBP2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 ZMYND19Q96E35 227 aaPredicted RBP2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 YIPF6Q96EC8 236 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 CCDC42Q96M95 316 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 TMEM56Q96MV1 263 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 F2RL3Q96RI0 385 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 NODALQ96S42 347 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 KIR2DL4Q99706 377 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 RIOK2Q9BVS4 552 aaKnown RBP2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 BARHL1Q9BZE3 327 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 SLC19A3Q9BZV2 496 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 DERL2Q9GZP9 239 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 ASB8Q9H765 288 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 PLGRKTQ9HBL7 147 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 EXOSC4Q9NPD3 245 aaKnown RBP2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 TMEM100Q9NV29 134 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 DDIT4Q9NX09 232 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 TFR2Q9UP52 801 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 AP3M1Q9Y2T2 418 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 UNC79Q9P2D8 2635 aa2.59□□□□□ -1.99
HERPUD1-211ENST00000566550 USP42Q9H9J4 1324 aaKnown RBP2.59□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms