RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 SF3A2Q15428 464 aaKnown RBP9.27□□□□□ -0.93
UBFD1-205ENST00000566136 KCNMB1Q16558 191 aa9.27□□□□□ -0.93
UBFD1-205ENST00000566136 TRIM16LQ309B1 348 aa9.27□□□□□ -0.93
UBFD1-205ENST00000566136 GAGE13Q4V321 117 aa9.27□□□□□ -0.93
UBFD1-205ENST00000566136 TCEANCQ8N8B7 351 aa9.27□□□□□ -0.93
UBFD1-205ENST00000566136 NAT6Q93015 286 aa9.27□□□□□ -0.93
UBFD1-205ENST00000566136 Q96MT0 163 aa9.27□□□□□ -0.93
UBFD1-205ENST00000566136 C6orf62Q9GZU0 229 aaPredicted RBP9.27□□□□□ -0.93
UBFD1-205ENST00000566136 DSN1Q9H410 356 aa9.27□□□□□ -0.93
UBFD1-205ENST00000566136 ARHGEF17Q96PE2 2063 aaPredicted RBP9.27□□□□□ -0.93
UBFD1-205ENST00000566136 ABCA7Q8IZY2 2146 aa9.27□□□□□ -0.93
UBFD1-205ENST00000566136 EFCAB10A6NFE3 127 aa9.27□□□□□ -0.93
UBFD1-205ENST00000566136 RPLP0P05388 317 aaKnown RBP9.27□□□□□ -0.93
UBFD1-205ENST00000566136 KITLGP21583 273 aa9.27□□□□□ -0.93
UBFD1-205ENST00000566136 RGS6P49758 472 aa9.27□□□□□ -0.93
UBFD1-205ENST00000566136 NUFIP2Q7Z417 695 aaKnown RBP9.27□□□□□ -0.93
UBFD1-205ENST00000566136 TSTD1Q8NFU3 115 aa9.27□□□□□ -0.93
UBFD1-205ENST00000566136 S100ZQ8WXG8 99 aa9.27□□□□□ -0.93
UBFD1-205ENST00000566136 PINX1Q96BK5 328 aaKnown RBP9.27□□□□□ -0.93
UBFD1-205ENST00000566136 NXF5Q9H1B4 397 aaKnown RBP9.27□□□□□ -0.93
UBFD1-205ENST00000566136 FBXO8Q9NRD0 319 aa9.27□□□□□ -0.93
UBFD1-205ENST00000566136 TVP23BQ9NYZ1 205 aa9.27□□□□□ -0.93
UBFD1-205ENST00000566136 CSNK2A2P19784 350 aaPredicted RBP9.26□□□□□ -0.93
UBFD1-205ENST00000566136 MAS1LP35410 378 aa9.26□□□□□ -0.93
UBFD1-205ENST00000566136 RPS4XP62701 263 aaKnown RBP9.26□□□□□ -0.93
UBFD1-205ENST00000566136 HOXC5Q00444 222 aa9.26□□□□□ -0.93
UBFD1-205ENST00000566136 TLE4Q04727 773 aa9.26□□□□□ -0.93
UBFD1-205ENST00000566136 SRYQ05066 204 aa9.26□□□□□ -0.93
UBFD1-205ENST00000566136 ZNHIT3Q15649 155 aaPredicted RBP9.26□□□□□ -0.93
UBFD1-205ENST00000566136 PLK5Q496M5 336 aa9.26□□□□□ -0.93
UBFD1-205ENST00000566136 PDSS1Q5T2R2 415 aa9.26□□□□□ -0.93
UBFD1-205ENST00000566136 SLC48A1Q6P1K1 146 aa9.26□□□□□ -0.93
UBFD1-205ENST00000566136 VN1R4Q7Z5H5 301 aa9.26□□□□□ -0.93
UBFD1-205ENST00000566136 OR4N5Q8IXE1 308 aa9.26□□□□□ -0.93
UBFD1-205ENST00000566136 OR4K5Q8NGD3 323 aa9.26□□□□□ -0.93
UBFD1-205ENST00000566136 OR4A4PQ8NGN8 299 aa9.26□□□□□ -0.93
UBFD1-205ENST00000566136 RASSF5Q8WWW0 418 aa9.26□□□□□ -0.93
UBFD1-205ENST00000566136 OR7D2Q96RA2 312 aa9.26□□□□□ -0.93
UBFD1-205ENST00000566136 NUDT9Q9BW91 350 aa9.26□□□□□ -0.93
UBFD1-205ENST00000566136 CES1P1Q9UKY3 287 aa9.26□□□□□ -0.93
UBFD1-205ENST00000566136 TPRP12270 2363 aaKnown RBP9.26□□□□□ -0.93
UBFD1-205ENST00000566136 METTL15A6NJ78 407 aa9.26□□□□□ -0.93
UBFD1-205ENST00000566136 CHST1O43916 411 aa9.26□□□□□ -0.93
UBFD1-205ENST00000566136 ERVS71-1P61550 626 aa9.26□□□□□ -0.93
UBFD1-205ENST00000566136 CHRNEQ04844 493 aa9.26□□□□□ -0.93
UBFD1-205ENST00000566136 ZNF404Q494X3 552 aa9.26□□□□□ -0.93
UBFD1-205ENST00000566136 PAQR6Q6TCH4 344 aa9.26□□□□□ -0.93
UBFD1-205ENST00000566136 CASP12Q6UXS9 341 aa9.26□□□□□ -0.93
UBFD1-205ENST00000566136 ZNF367Q7RTV3 350 aa9.26□□□□□ -0.93
UBFD1-205ENST00000566136 WDFY1Q8IWB7 410 aa9.26□□□□□ -0.93
UBFD1-205ENST00000566136 MGLLQ99685 303 aa9.26□□□□□ -0.93
UBFD1-205ENST00000566136 KIR3DX1Q9H7L2 352 aa9.26□□□□□ -0.93
UBFD1-205ENST00000566136 FGF21Q9NSA1 209 aa9.26□□□□□ -0.93
UBFD1-205ENST00000566136 TMEM74BQ9NUR3 256 aa9.26□□□□□ -0.93
UBFD1-205ENST00000566136 MMP17Q9ULZ9 603 aa9.26□□□□□ -0.93
UBFD1-205ENST00000566136 NTNG1Q9Y2I2 539 aa9.26□□□□□ -0.93
UBFD1-205ENST00000566136 GON4LQ3T8J9 2241 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 TRAV24A0A0B4J272 114 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 TMEM150CB9EJG8 249 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 RNASEK-C17orf49H0YIS7 233 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 CCRL2O00421 344 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 P2RX6O15547 441 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 PRKYO43930 277 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 MPZL2O60487 215 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 MNDAP41218 407 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 SOX3P41225 446 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 CEBPGP53567 150 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 SSX1Q16384 188 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 C12orf73Q69YU5 71 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 Q6ZWC4 215 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 USP43Q70EL4 1123 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 SLC34A3Q8N130 599 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 OR10G6Q8NH81 332 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 SFXN5Q8TD22 340 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 GABRG3Q99928 467 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 CDCA4Q9BXL8 241 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 SRMSQ9H3Y6 488 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 SLC25A19Q9HC21 320 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 OR2M5A3KFT3 312 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 ZNF860A6NHJ4 632 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 CPSF4LA6NMK7 179 aaKnown RBP9.25□□□□□ -0.93
UBFD1-205ENST00000566136 EMC8O43402 210 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 RAMP3O60896 148 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 AVPR1BP47901 424 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 CLDN20P56880 219 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 SMIM11AP58511 58 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 STXBP1P61764 594 aaKnown RBP9.25□□□□□ -0.93
UBFD1-205ENST00000566136 MRPS21P82921 87 aaKnown RBP9.25□□□□□ -0.93
UBFD1-205ENST00000566136 ID2Q02363 134 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 ZNF91Q05481 1191 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 KLF5Q13887 457 aaPredicted RBP9.25□□□□□ -0.93
UBFD1-205ENST00000566136 MEDAGQ5VYS4 303 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 TCEAL6Q6IPX3 200 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 ACSM5Q6NUN0 579 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.25□□□□□ -0.93
UBFD1-205ENST00000566136 SFTPA2Q8IWL1 248 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 OR5AU1Q8NGC0 362 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 OR5T2Q8NGG2 359 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 PATE1Q8WXA2 126 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 HIST1H2ACQ93077 130 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms