RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 MARCH7Q9H992 704 aa5.34□□□□□ -1.55
TCF4-228ENST00000565393 UNKLQ9H9P5 680 aaKnown RBP5.34□□□□□ -1.55
TCF4-228ENST00000565393 VNN3Q9NY84 501 aa5.34□□□□□ -1.55
TCF4-228ENST00000565393 DNAJC27Q9NZQ0 273 aa5.34□□□□□ -1.55
TCF4-228ENST00000565393 MRPL15Q9P015 296 aaKnown RBP5.34□□□□□ -1.55
TCF4-228ENST00000565393 PDP1Q9P0J1 537 aaPredicted RBP5.34□□□□□ -1.55
TCF4-228ENST00000565393 COMMD3-BMI1R4GMX3 469 aa5.34□□□□□ -1.55
TCF4-228ENST00000565393 VPS13CQ709C8 3753 aa5.34□□□□□ -1.55
TCF4-228ENST00000565393 MDFIC2A0A1B0GVS7 189 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 ANXA2P2A6NMY6 339 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 POM121CA8CG34 1229 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 P2RY10O00398 339 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 DVL1O14640 695 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 CDIPTO14735 213 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 PHYHO14832 338 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 TMPRSS2O15393 492 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 NDUFB3O43676 98 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 E2F6O75461 281 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 GLCEO94923 617 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 PLATP00750 562 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 LHBP01229 141 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 HMGN1P05114 100 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 SFTPBP07988 381 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 RNASE1P07998 156 aaKnown RBP5.33□□□□□ -1.56
TCF4-228ENST00000565393 T-ENOLP0DO92 83 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 PSKH1P11801 424 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 PRKACGP22612 351 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 CFL1P23528 166 aaKnown RBP5.33□□□□□ -1.56
TCF4-228ENST00000565393 OTX1P32242 354 aaPredicted RBP5.33□□□□□ -1.56
TCF4-228ENST00000565393 PSMB10P40306 273 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 MAGEA2P43356 314 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 GSK3AP49840 483 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 ZNF121P58317 390 aaPredicted RBP5.33□□□□□ -1.56
TCF4-228ENST00000565393 BPIFB3P59826 476 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 GMFBP60983 142 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 RPS7P62081 194 aaKnown RBP5.33□□□□□ -1.56
TCF4-228ENST00000565393 IL13RA1P78552 427 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 FAM3AP98173 230 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 SNCBQ16143 134 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 PCK2Q16822 640 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 MICBQ29980 383 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 METTL11BQ5VVY1 283 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 RUSC1-AS1Q66K80 236 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 LCN8Q6JVE9 175 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 PLBD1Q6P4A8 553 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 KCTD8Q6ZWB6 473 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 BTN2A1Q7KYR7 527 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 SLC16A9Q7RTY1 509 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 PDZD9Q8IXQ8 264 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 GCSAMQ8N6F7 178 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 SCCPDHQ8NBX0 429 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 OR5T2Q8NGG2 359 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 OR52H1Q8NGJ2 320 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 LRRC29Q8WV35 223 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 CANT1Q8WVQ1 401 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 ST8SIA4Q92187 359 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 PIGCQ92535 297 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 TMIGD2Q96BF3 282 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 CCDC124Q96CT7 223 aaKnown RBP5.33□□□□□ -1.56
TCF4-228ENST00000565393 ASB9Q96DX5 294 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 CLPTM1LQ96KA5 538 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 C1orf147Q96MC9 270 aaPredicted RBP5.33□□□□□ -1.56
TCF4-228ENST00000565393 WDFY2Q96P53 400 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 CCL13Q99616 98 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 MICU1Q9BPX6 476 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 TEX12Q9BXU0 123 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 OPA3Q9H6K4 179 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 PPP1R3EQ9H7J1 279 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 ZMAT3Q9HA38 289 aaKnown RBP5.33□□□□□ -1.56
TCF4-228ENST00000565393 RNPEPL1Q9HAU8 725 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 NOX4Q9NPH5 578 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 CMC2Q9NRP2 79 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 TAS2R1Q9NYW7 299 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 CTSZQ9UBR2 303 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 PRPF19Q9UMS4 504 aaKnown RBP5.33□□□□□ -1.56
TCF4-228ENST00000565393 FAM96BQ9Y3D0 163 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 RHBDD3Q9Y3P4 386 aa5.33□□□□□ -1.56
TCF4-228ENST00000565393 YLPM1P49750 1951 aaKnown RBP5.33□□□□□ -1.56
TCF4-228ENST00000565393 DNHD1Q96M86 4753 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 SONP18583 2426 aaKnown RBP5.32□□□□□ -1.56
TCF4-228ENST00000565393 CENPVL3A0A0U1RRI6 287 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 FAM181BA6NEQ2 426 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 ZNF850A8MQ14 1090 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 C22orf46C9J442 243 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 CLDN34H7C241 214 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 TNFRSF13BO14836 293 aaPredicted RBP5.32□□□□□ -1.56
TCF4-228ENST00000565393 GYG2O15488 501 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 PTBP3O95758 552 aaKnown RBP5.32□□□□□ -1.56
TCF4-228ENST00000565393 ECDO95905 644 aaPredicted RBP5.32□□□□□ -1.56
TCF4-228ENST00000565393 FAM107AO95990 144 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 LYNP07948 512 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 OSMP13725 252 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 ANOS1P23352 680 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 CFHR2P36980 270 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 HCCSP53701 268 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 IL5RAQ01344 420 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 IKZF1Q13422 519 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 GK3PQ14409 553 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 PDCD1Q15116 288 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 LINC01590Q5TEZ4 76 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms