RNA–Protein interactions for RNA: ENST00000564353.5

CLK3-215, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-215ENST00000564353 SERPINA2P20848 420 aa11.91□□□□□ -0.5
CLK3-215ENST00000564353 ZBTB25P24278 435 aa11.91□□□□□ -0.5
CLK3-215ENST00000564353 ARFRP1Q13795 201 aa11.91□□□□□ -0.5
CLK3-215ENST00000564353 PHYHD1Q5SRE7 291 aa11.91□□□□□ -0.5
CLK3-215ENST00000564353 JMJD6Q6NYC1 403 aaPredicted RBP11.91□□□□□ -0.5
CLK3-215ENST00000564353 WDSUB1Q8N9V3 476 aa11.91□□□□□ -0.5
CLK3-215ENST00000564353 THRSPQ92748 146 aa11.91□□□□□ -0.5
CLK3-215ENST00000564353 PIGTQ969N2 578 aa11.91□□□□□ -0.5
CLK3-215ENST00000564353 ZNF837Q96EG3 531 aaPredicted RBP11.91□□□□□ -0.5
CLK3-215ENST00000564353 CCDC74BQ96LY2 380 aa11.91□□□□□ -0.5
CLK3-215ENST00000564353 RASL10BQ96S79 203 aa11.91□□□□□ -0.5
CLK3-215ENST00000564353 MRPL13Q9BYD1 178 aaKnown RBP11.91□□□□□ -0.5
CLK3-215ENST00000564353 LPAR5Q9H1C0 372 aa11.91□□□□□ -0.5
CLK3-215ENST00000564353 SLC39A1Q9NY26 324 aa11.91□□□□□ -0.5
CLK3-215ENST00000564353 RARRES3Q9UL19 164 aa11.91□□□□□ -0.5
CLK3-215ENST00000564353 B3GALT5Q9Y2C3 310 aa11.91□□□□□ -0.5
CLK3-215ENST00000564353 PRRC2CQ9Y520 2896 aaKnown RBP11.91□□□□□ -0.5
CLK3-215ENST00000564353 SULT2B1O00204 365 aa11.91□□□□□ -0.5
CLK3-215ENST00000564353 CD74P04233 296 aa11.91□□□□□ -0.5
CLK3-215ENST00000564353 RPA2P15927 270 aa11.91□□□□□ -0.5
CLK3-215ENST00000564353 PNLIPP16233 465 aa11.91□□□□□ -0.5
CLK3-215ENST00000564353 SERPINF1P36955 418 aa11.91□□□□□ -0.5
CLK3-215ENST00000564353 QRFPP83859 136 aa11.91□□□□□ -0.5
CLK3-215ENST00000564353 TMEM71Q6P5X7 295 aa11.91□□□□□ -0.5
CLK3-215ENST00000564353 LYG2Q86SG7 212 aa11.91□□□□□ -0.5
CLK3-215ENST00000564353 OR5AS1Q8N127 324 aa11.91□□□□□ -0.5
CLK3-215ENST00000564353 NKAIN3Q8N8D7 197 aa11.91□□□□□ -0.5
CLK3-215ENST00000564353 NOXO1Q8NFA2 376 aa11.91□□□□□ -0.5
CLK3-215ENST00000564353 PXT1Q8NFP0 134 aa11.91□□□□□ -0.5
CLK3-215ENST00000564353 SPSB2Q99619 263 aa11.91□□□□□ -0.5
CLK3-215ENST00000564353 ADAT1Q9BUB4 502 aaKnown RBP11.91□□□□□ -0.5
CLK3-215ENST00000564353 ZNF416Q9BWM5 594 aa11.91□□□□□ -0.5
CLK3-215ENST00000564353 ZNF581Q9P0T4 197 aa11.91□□□□□ -0.5
CLK3-215ENST00000564353 A0A0B4J2A0 478 aa11.9□□□□□ -0.5
CLK3-215ENST00000564353 IGHV5-10-1A0A0J9YXX1 117 aa11.9□□□□□ -0.5
CLK3-215ENST00000564353 LOC390937A0A1W2PQ73 354 aa11.9□□□□□ -0.5
CLK3-215ENST00000564353 ZNF726A6NNF4 738 aa11.9□□□□□ -0.5
CLK3-215ENST00000564353 STMND1H3BQB6 276 aa11.9□□□□□ -0.5
CLK3-215ENST00000564353 PATE4P0C8F1 98 aa11.9□□□□□ -0.5
CLK3-215ENST00000564353 PGAM2P15259 253 aa11.9□□□□□ -0.5
CLK3-215ENST00000564353 FAHP16930 419 aa11.9□□□□□ -0.5
CLK3-215ENST00000564353 TMEM50BP56557 158 aa11.9□□□□□ -0.5
CLK3-215ENST00000564353 PCK2Q16822 640 aa11.9□□□□□ -0.5
CLK3-215ENST00000564353 BRICD5Q6PL45 260 aa11.9□□□□□ -0.5
CLK3-215ENST00000564353 TMEM185AQ8NFB2 350 aa11.9□□□□□ -0.5
CLK3-215ENST00000564353 OR6K3Q8NGY3 331 aa11.9□□□□□ -0.5
CLK3-215ENST00000564353 RAB3CQ96E17 227 aa11.9□□□□□ -0.5
CLK3-215ENST00000564353 MRPS24Q96EL2 167 aaKnown RBP11.9□□□□□ -0.5
CLK3-215ENST00000564353 ZNF385AQ96PM9 386 aaKnown RBP11.9□□□□□ -0.5
CLK3-215ENST00000564353 PRRT1Q99946 306 aa11.9□□□□□ -0.5
CLK3-215ENST00000564353 RBM24Q9BX46 236 aaKnown RBP11.9□□□□□ -0.5
CLK3-215ENST00000564353 SHPKQ9UHJ6 478 aa11.9□□□□□ -0.5
CLK3-215ENST00000564353 IGKV1-9A0A0C4DH69 117 aa11.9□□□□□ -0.5
CLK3-215ENST00000564353 ZNF878C9JN71 531 aa11.9□□□□□ -0.5
CLK3-215ENST00000564353 D6RAR5 112 aa11.9□□□□□ -0.5
CLK3-215ENST00000564353 SULT1C2O00338 296 aa11.9□□□□□ -0.5
CLK3-215ENST00000564353 KNG1P01042 644 aa11.9□□□□□ -0.5
CLK3-215ENST00000564353 GLI4P10075 376 aa11.9□□□□□ -0.5
CLK3-215ENST00000564353 ZP4Q12836 540 aa11.9□□□□□ -0.5
CLK3-215ENST00000564353 CHAF1BQ13112 559 aa11.9□□□□□ -0.5
CLK3-215ENST00000564353 IKZF1Q13422 519 aa11.9□□□□□ -0.5
CLK3-215ENST00000564353 CCDC157Q569K6 752 aa11.9□□□□□ -0.5
CLK3-215ENST00000564353 WDR74Q6RFH5 385 aaPredicted RBP11.9□□□□□ -0.5
CLK3-215ENST00000564353 DCUN1D4Q92564 292 aa11.9□□□□□ -0.5
CLK3-215ENST00000564353 OR2S2Q9NQN1 319 aa11.9□□□□□ -0.5
CLK3-215ENST00000564353 ASF1BQ9NVP2 202 aa11.9□□□□□ -0.5
CLK3-215ENST00000564353 GSKIPQ9P0R6 139 aa11.9□□□□□ -0.5
CLK3-215ENST00000564353 GPN3Q9UHW5 284 aaPredicted RBP11.9□□□□□ -0.5
CLK3-215ENST00000564353 LHX6Q9UPM6 363 aa11.9□□□□□ -0.5
CLK3-215ENST00000564353 PRELID3BQ9Y3B1 194 aa11.9□□□□□ -0.5
CLK3-215ENST00000564353 CSAG2Q9Y5P2 127 aa11.9□□□□□ -0.5
CLK3-215ENST00000564353 EML6Q6ZMW3 1958 aa11.9□□□□□ -0.51
CLK3-215ENST00000564353 PI4KAP42356 2102 aa11.89□□□□□ -0.51
CLK3-215ENST00000564353 EFSO43281 561 aa11.89□□□□□ -0.51
CLK3-215ENST00000564353 HPP00738 406 aa11.89□□□□□ -0.51
CLK3-215ENST00000564353 CFPP27918 469 aa11.89□□□□□ -0.51
CLK3-215ENST00000564353 RAET1LQ5VY80 246 aa11.89□□□□□ -0.51
CLK3-215ENST00000564353 SLC25A42Q86VD7 318 aa11.89□□□□□ -0.51
CLK3-215ENST00000564353 OIT3Q8WWZ8 545 aa11.89□□□□□ -0.51
CLK3-215ENST00000564353 PHB2Q99623 299 aa11.89□□□□□ -0.51
CLK3-215ENST00000564353 HDHD3Q9BSH5 251 aaPredicted RBP11.89□□□□□ -0.51
CLK3-215ENST00000564353 ALX4Q9H161 411 aaPredicted RBP11.89□□□□□ -0.51
CLK3-215ENST00000564353 TMEM231Q9H6L2 316 aa11.89□□□□□ -0.51
CLK3-215ENST00000564353 ACKR4Q9NPB9 350 aa11.89□□□□□ -0.51
CLK3-215ENST00000564353 PCDHB16Q9NRJ7 776 aa11.89□□□□□ -0.51
CLK3-215ENST00000564353 TNFSF18Q9UNG2 199 aa11.89□□□□□ -0.51
CLK3-215ENST00000564353 SRPK3Q9UPE1 567 aa11.89□□□□□ -0.51
CLK3-215ENST00000564353 A8MXK9 166 aa11.89□□□□□ -0.51
CLK3-215ENST00000564353 CDC14BO60729 498 aa11.89□□□□□ -0.51
CLK3-215ENST00000564353 ZFAND5O76080 213 aa11.89□□□□□ -0.51
CLK3-215ENST00000564353 CASRP41180 1078 aa11.89□□□□□ -0.51
CLK3-215ENST00000564353 P2RY4P51582 365 aa11.89□□□□□ -0.51
CLK3-215ENST00000564353 ZNF273Q14593 569 aa11.89□□□□□ -0.51
CLK3-215ENST00000564353 PDCD1Q15116 288 aa11.89□□□□□ -0.51
CLK3-215ENST00000564353 NKAPLQ5M9Q1 402 aa11.89□□□□□ -0.51
CLK3-215ENST00000564353 THEM4Q5T1C6 240 aa11.89□□□□□ -0.51
CLK3-215ENST00000564353 OR2W3Q7Z3T1 314 aa11.89□□□□□ -0.51
CLK3-215ENST00000564353 MISPQ8IVT2 679 aa11.89□□□□□ -0.51
CLK3-215ENST00000564353 OR51T1Q8NGJ9 327 aa11.89□□□□□ -0.51
CLK3-215ENST00000564353 ELP5Q8TE02 316 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms