RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	HMGB4	Q8WW32	186 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	MRPL3	P09001	348 aa	Known RBP	3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	GLB1	P16278	677 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	CRISP2	P16562	243 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	CSF2RB	P32927	897 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	NUFIP2	Q7Z417	695 aa	Known RBP	3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	GPR62	Q9BZJ7	368 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	OR2J1	Q9GZK6	312 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	C19orf25	Q9UFG5	118 aa	Predicted RBP	3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	TRMT12	Q53H54	448 aa	Known RBP	3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	DCAF10	Q5QP82	559 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288		Q6ZVL8	140 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	BCOR	Q6W2J9	1755 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	TRAV1-1	A0A0B4J248	108 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	RNF222	A6NCQ9	220 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	AQP7P3	A6NL99	342 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	COX5A	P20674	150 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	SLC22A6	Q4U2R8	563 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	ZNF681	Q96N22	645 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	LTBP4	Q8N2S1	1624 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	SOCS6	O14544	535 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	PDX1	P52945	283 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	CLDN12	P56749	244 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	ARRDC3	Q96B67	414 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	OMG	P23515	440 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	MPG	P29372	298 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	CORO1A	P31146	461 aa	Known RBP	3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	SOX8	P57073	446 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	TMEM183A	Q8IXX5	376 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	MOB3A	Q96BX8	217 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	CDKN1B	P46527	198 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	NXPE3	Q969Y0	559 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	MRPS16	Q9Y3D3	137 aa	Known RBP	3.85	□□□□□ -1.79
MACF1-231	ENST00000564288		A0A087WV62	115 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	NKX6-3	A6NJ46	265 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	PRKRA	O75569	313 aa	Known RBP	3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	SOX4	Q06945	474 aa	Predicted RBP	3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	RAB35	Q15286	201 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	IER5L	Q5T953	404 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	NAA11	Q9BSU3	229 aa	Predicted RBP	3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	GRXCR1	A8MXD5	290 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	TMEM262	E9PQX1	116 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	PRLHR	P49683	370 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	HIKESHI	Q53FT3	197 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	IL22RA2	Q969J5	263 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	SERPINA2	P20848	420 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	BLVRB	P30043	206 aa	Predicted RBP	3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	RPL7L1	Q6DKI1	246 aa	Known RBP	3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	PAQR9	Q6ZVX9	377 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	CATSPERD	Q86XM0	798 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	LINC00116	Q8NCU8	138 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	SPSB1	Q96BD6	273 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	PPP1R3D	O95685	299 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	C6	P13671	934 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	MISP3	Q96FF7	219 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	ATP5S	Q99766	215 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	SMIM7	Q9BQ49	75 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	DDAH2	O95865	285 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	MPL	P40238	635 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	PDLIM3	Q53GG5	364 aa	Predicted RBP	3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	OR6N2	Q8NGY6	317 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	DGAT2	Q96PD7	388 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	GLIPR2	Q9H4G4	154 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	MRPS28	Q9Y2Q9	187 aa	Known RBP	3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	HIST1H1T	P22492	207 aa	Predicted RBP	3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	LEG1	Q6P5S2	330 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	OR4C16	Q8NGL9	310 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	ZG16B	Q96DA0	208 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	OR1A2	Q9Y585	309 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	SERINC4	A6NH21	518 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	GLRA1	P23415	457 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	GRPR	P30550	384 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	BSG	P35613	385 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	PMS2P11	Q13670	270 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	GABRQ	Q9UN88	632 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	NBAS	A2RRP1	2371 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288		A0A1B0GU03	582 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	FCMR	O60667	390 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	CTSD	P07339	412 aa	Predicted RBP	3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	BID	P55957	195 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	ZNF117	Q03924	483 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	LMAN2	Q12907	356 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	SQSTM1	Q13501	440 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	SPTSSA	Q969W0	71 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	FGGY	Q96C11	551 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	TWSG1	Q9GZX9	223 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	CREBZF	Q9NS37	354 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	POLE	Q07864	2286 aa		3.85	□□□□□ -1.79
MACF1-231	ENST00000564288	SLC38A8	A6NNN8	435 aa		3.84	□□□□□ -1.79
MACF1-231	ENST00000564288	HMGN4	O00479	90 aa		3.84	□□□□□ -1.79
MACF1-231	ENST00000564288	CDKN1C	P49918	316 aa	Predicted RBP	3.84	□□□□□ -1.79
MACF1-231	ENST00000564288	TSTD1	Q8NFU3	115 aa		3.84	□□□□□ -1.79
MACF1-231	ENST00000564288	OR1P1	Q8NH06	330 aa		3.84	□□□□□ -1.79
MACF1-231	ENST00000564288	EHF	Q9NZC4	300 aa		3.84	□□□□□ -1.79
MACF1-231	ENST00000564288	TRBV6-7	A0A0A0MS04	114 aa		3.84	□□□□□ -1.79
MACF1-231	ENST00000564288	CYB561A3	Q8NBI2	242 aa		3.84	□□□□□ -1.79
MACF1-231	ENST00000564288	OSGIN2	Q9Y236	505 aa		3.84	□□□□□ -1.79
MACF1-231	ENST00000564288	SDK1	Q7Z5N4	2213 aa		3.84	□□□□□ -1.79
MACF1-231	ENST00000564288	FZD5	Q13467	585 aa		3.84	□□□□□ -1.79
MACF1-231	ENST00000564288	MDGA1	Q8NFP4	955 aa		3.84	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms