RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 RAB32Q13637 225 aa16.62■□□□□ 0.25
RAB40C-206ENST00000561781 C1orf194Q5T5A4 169 aa16.62■□□□□ 0.25
RAB40C-206ENST00000561781 MDGA2Q7Z553 956 aa16.62■□□□□ 0.25
RAB40C-206ENST00000561781 YAF2Q8IY57 180 aa16.62■□□□□ 0.25
RAB40C-206ENST00000561781 OR51F2Q8NH61 342 aa16.62■□□□□ 0.25
RAB40C-206ENST00000561781 DIRC2Q96SL1 478 aa16.62■□□□□ 0.25
RAB40C-206ENST00000561781 Q9N2J8 555 aa16.62■□□□□ 0.25
RAB40C-206ENST00000561781 SEMA5BQ9P283 1151 aa16.62■□□□□ 0.25
RAB40C-206ENST00000561781 SERTAD3Q9UJW9 196 aa16.62■□□□□ 0.25
RAB40C-206ENST00000561781 DKKL1Q9UK85 242 aa16.62■□□□□ 0.25
RAB40C-206ENST00000561781 KLK13Q9UKR3 277 aa16.62■□□□□ 0.25
RAB40C-206ENST00000561781 CUL9Q8IWT3 2517 aa16.62■□□□□ 0.25
RAB40C-206ENST00000561781 DIRAS3O95661 229 aa16.62■□□□□ 0.25
RAB40C-206ENST00000561781 RAC2P15153 192 aa16.62■□□□□ 0.25
RAB40C-206ENST00000561781 CD82P27701 267 aa16.62■□□□□ 0.25
RAB40C-206ENST00000561781 KCNMB1Q16558 191 aa16.62■□□□□ 0.25
RAB40C-206ENST00000561781 OR52N4Q8NGI2 321 aa16.62■□□□□ 0.25
RAB40C-206ENST00000561781 TMEM106AQ96A25 262 aa16.62■□□□□ 0.25
RAB40C-206ENST00000561781 INTS14Q96SY0 518 aa16.62■□□□□ 0.25
RAB40C-206ENST00000561781 GSX1Q9H4S2 264 aaPredicted RBP16.62■□□□□ 0.25
RAB40C-206ENST00000561781 C6orf106Q9H6K1 298 aaPredicted RBP16.62■□□□□ 0.25
RAB40C-206ENST00000561781 PELI2Q9HAT8 420 aa16.62■□□□□ 0.25
RAB40C-206ENST00000561781 FRRS1LQ9P0K9 344 aa16.62■□□□□ 0.25
RAB40C-206ENST00000561781 DNAH14Q0VDD8 3507 aa16.62■□□□□ 0.25
RAB40C-206ENST00000561781 YLPM1P49750 1951 aaKnown RBP16.61■□□□□ 0.25
RAB40C-206ENST00000561781 A0A0A6YYH2 397 aa16.61■□□□□ 0.25
RAB40C-206ENST00000561781 A6NJ64 397 aa16.61■□□□□ 0.25
RAB40C-206ENST00000561781 PRSS47A8MTI9 375 aa16.61■□□□□ 0.25
RAB40C-206ENST00000561781 C1QTNF3-AMACRE9PGA6 284 aa16.61■□□□□ 0.25
RAB40C-206ENST00000561781 PGA4P0DJD7 388 aa16.61■□□□□ 0.25
RAB40C-206ENST00000561781 PGA5P0DJD9 388 aa16.61■□□□□ 0.25
RAB40C-206ENST00000561781 REEP5Q00765 189 aa16.61■□□□□ 0.25
RAB40C-206ENST00000561781 FHL1Q13642 323 aa16.61■□□□□ 0.25
RAB40C-206ENST00000561781 C4orf17Q53FE4 359 aa16.61■□□□□ 0.25
RAB40C-206ENST00000561781 PHF19Q5T6S3 580 aa16.61■□□□□ 0.25
RAB40C-206ENST00000561781 KDM8Q8N371 416 aa16.61■□□□□ 0.25
RAB40C-206ENST00000561781 OR4S1Q8NGB4 309 aa16.61■□□□□ 0.25
RAB40C-206ENST00000561781 ANKRD9Q96BM1 317 aaPredicted RBP16.61■□□□□ 0.25
RAB40C-206ENST00000561781 C2orf50Q96LR7 162 aa16.61■□□□□ 0.25
RAB40C-206ENST00000561781 MACROD1Q9BQ69 325 aa16.61■□□□□ 0.25
RAB40C-206ENST00000561781 TCFL5Q9UL49 500 aa16.61■□□□□ 0.25
RAB40C-206ENST00000561781 TICRRQ7Z2Z1 1910 aa16.61■□□□□ 0.25
RAB40C-206ENST00000561781 NUP210LQ5VU65 1888 aa16.61■□□□□ 0.25
RAB40C-206ENST00000561781 TCRBV21S2A2A0A5A6 115 aa16.61■□□□□ 0.25
RAB40C-206ENST00000561781 CA11O75493 328 aa16.61■□□□□ 0.25
RAB40C-206ENST00000561781 CSNK2A2P19784 350 aaPredicted RBP16.61■□□□□ 0.25
RAB40C-206ENST00000561781 LMO1P25800 156 aa16.61■□□□□ 0.25
RAB40C-206ENST00000561781 MAJINQ3KP22 176 aa16.61■□□□□ 0.25
RAB40C-206ENST00000561781 EIPR1Q53HC9 387 aa16.61■□□□□ 0.25
RAB40C-206ENST00000561781 TMEM128Q5BJH2 165 aa16.61■□□□□ 0.25
RAB40C-206ENST00000561781 ZNF684Q5T5D7 378 aa16.61■□□□□ 0.25
RAB40C-206ENST00000561781 GRHL3Q8TE85 626 aa16.61■□□□□ 0.25
RAB40C-206ENST00000561781 SLC41A2Q96JW4 573 aa16.61■□□□□ 0.25
RAB40C-206ENST00000561781 NKX3-1Q99801 234 aaPredicted RBP16.61■□□□□ 0.25
RAB40C-206ENST00000561781 LRFN1Q9P244 771 aa16.61■□□□□ 0.25
RAB40C-206ENST00000561781 FBXL17Q9UF56 701 aa16.61■□□□□ 0.25
RAB40C-206ENST00000561781 KCNK6Q9Y257 313 aa16.61■□□□□ 0.25
RAB40C-206ENST00000561781 HS3ST2Q9Y278 367 aa16.61■□□□□ 0.25
RAB40C-206ENST00000561781 KIR2DL5BA0A0G2JN68 375 aa16.6■□□□□ 0.25
RAB40C-206ENST00000561781 KIR2DL5BA0A0G2JPC4 375 aa16.6■□□□□ 0.25
RAB40C-206ENST00000561781 A0A1B0GTH9 108 aa16.6■□□□□ 0.25
RAB40C-206ENST00000561781 MRPL2Q5T653 305 aaKnown RBP16.6■□□□□ 0.25
RAB40C-206ENST00000561781 CLEC2AQ6UVW9 174 aa16.6■□□□□ 0.25
RAB40C-206ENST00000561781 KIR2DL5AQ8N109 375 aa16.6■□□□□ 0.25
RAB40C-206ENST00000561781 OR51A4Q8NGJ6 313 aa16.6■□□□□ 0.25
RAB40C-206ENST00000561781 OR1P1Q8NH06 330 aa16.6■□□□□ 0.25
RAB40C-206ENST00000561781 OR10AC1Q8NH08 325 aa16.6■□□□□ 0.25
RAB40C-206ENST00000561781 RNASE8Q8TDE3 154 aaKnown RBP16.6■□□□□ 0.25
RAB40C-206ENST00000561781 THRSPQ92748 146 aa16.6■□□□□ 0.25
RAB40C-206ENST00000561781 VAX2Q9UIW0 290 aa16.6■□□□□ 0.25
RAB40C-206ENST00000561781 ZNF346Q9UL40 294 aaKnown RBP16.6■□□□□ 0.25
RAB40C-206ENST00000561781 MEMO1Q9Y316 297 aa16.6■□□□□ 0.25
RAB40C-206ENST00000561781 A0A087WV62 115 aa16.6■□□□□ 0.25
RAB40C-206ENST00000561781 FBXO45P0C2W1 286 aa16.6■□□□□ 0.25
RAB40C-206ENST00000561781 PGA3P0DJD8 388 aa16.6■□□□□ 0.25
RAB40C-206ENST00000561781 RPL12P30050 165 aaKnown RBP16.6■□□□□ 0.25
RAB40C-206ENST00000561781 RPL29P47914 159 aaKnown RBP16.6■□□□□ 0.25
RAB40C-206ENST00000561781 TEX38Q6PEX7 206 aa16.6■□□□□ 0.25
RAB40C-206ENST00000561781 ZNF679Q8IYX0 411 aa16.6■□□□□ 0.25
RAB40C-206ENST00000561781 OR1N1Q8NGS0 311 aa16.6■□□□□ 0.25
RAB40C-206ENST00000561781 RNF128Q8TEB7 428 aa16.6■□□□□ 0.25
RAB40C-206ENST00000561781 NMNAT3Q96T66 252 aa16.6■□□□□ 0.25
RAB40C-206ENST00000561781 FAAP24Q9BTP7 215 aa16.6■□□□□ 0.25
RAB40C-206ENST00000561781 OR11A1Q9GZK7 315 aa16.6■□□□□ 0.25
RAB40C-206ENST00000561781 GPR173Q9NS66 373 aa16.6■□□□□ 0.25
RAB40C-206ENST00000561781 IER3IP1Q9Y5U9 82 aa16.6■□□□□ 0.25
RAB40C-206ENST00000561781 C4orf51C9J302 202 aa16.59■□□□□ 0.25
RAB40C-206ENST00000561781 GEMIN2O14893 280 aaKnown RBP16.59■□□□□ 0.25
RAB40C-206ENST00000561781 OR4A8P0C604 315 aa16.59■□□□□ 0.25
RAB40C-206ENST00000561781 S100A10P60903 97 aa16.59■□□□□ 0.25
RAB40C-206ENST00000561781 DUSP8Q13202 625 aa16.59■□□□□ 0.25
RAB40C-206ENST00000561781 GAB4Q2WGN9 574 aa16.59■□□□□ 0.25
RAB40C-206ENST00000561781 DEGS2Q6QHC5 323 aa16.59■□□□□ 0.25
RAB40C-206ENST00000561781 ZNF595Q8IYB9 648 aa16.59■□□□□ 0.25
RAB40C-206ENST00000561781 TMEM104Q8NE00 496 aa16.59■□□□□ 0.25
RAB40C-206ENST00000561781 SLC24A4Q8NFF2 622 aa16.59■□□□□ 0.25
RAB40C-206ENST00000561781 ZPLD1Q8TCW7 415 aa16.59■□□□□ 0.25
RAB40C-206ENST00000561781 TVP23CQ96ET8 276 aa16.59■□□□□ 0.25
RAB40C-206ENST00000561781 COMMD4Q9H0A8 199 aa16.59■□□□□ 0.25
RAB40C-206ENST00000561781 PCED1AQ9H1Q7 454 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms