RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 SGCEO43556 437 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 TRMUO75648 421 aaKnown RBP4.19□□□□□ -1.74
HERC1-213ENST00000561359 CH25HO95992 272 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 BCHEP06276 602 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 SNRNP70P08621 437 aaKnown RBP4.19□□□□□ -1.74
HERC1-213ENST00000561359 COX5BP10606 129 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 UMPSP11172 480 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 IDO1P14902 403 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 ACADSP16219 412 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 TCP1P17987 556 aaKnown RBP4.19□□□□□ -1.74
HERC1-213ENST00000561359 COX7A1P24310 79 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 SLC6A1P30531 599 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 PRKAR1BP31321 381 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 CCT5P48643 541 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 PSMD7P51665 324 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 CLDN8P56748 225 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 CAV1Q03135 178 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 OR8G1Q15617 311 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 MAPK11Q15759 364 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 ZNF260Q3ZCT1 412 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 WDR38Q5JTN6 314 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 C6orf136Q5SQH8 315 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 FAM27D1Q5T7N8 215 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 FAM91A1Q658Y4 838 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 IGFL4Q6B9Z1 124 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 ZYG11AQ6WRX3 759 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 ZNF826PQ6ZT77 177 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 LHFPL4Q7Z7J7 247 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 ZNF329Q86UD4 541 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 LCA5Q86VQ0 697 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 DYNAPQ8N1N2 210 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 C11orf42Q8N5U0 333 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 TRIML2Q8N7C3 387 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 LSMEM1Q8N8F7 131 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 PCYOX1LQ8NBM8 494 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 SLC26A10Q8NG04 563 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 OR8J2Q8NGG1 315 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 OR9Q1Q8NGQ5 310 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 CAPSLQ8WWF8 208 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 ACOT11Q8WXI4 607 aaPredicted RBP4.19□□□□□ -1.74
HERC1-213ENST00000561359 SLC35B4Q969S0 331 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 RNFT2Q96EX2 444 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 DUS3LQ96G46 650 aaKnown RBP4.19□□□□□ -1.74
HERC1-213ENST00000561359 RAX2Q96IS3 184 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 ITCHQ96J02 903 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 HCAR1Q9BXC0 346 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 HEXA-AS1Q9H8Q6 139 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 TMEM27Q9HBJ8 222 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 PAPOLBQ9NRJ5 636 aaKnown RBP4.19□□□□□ -1.74
HERC1-213ENST00000561359 C1orf123Q9NWV4 160 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 AURKCQ9UQB9 309 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 PPP2R2CQ9Y2T4 447 aa4.19□□□□□ -1.74
HERC1-213ENST00000561359 PKHD1P08F94 4074 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 A0A0G2JPF8 293 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 A0A1B0GWJ7 208 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 A0A1W2PPL8 197 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 KRTAP23-1A1A580 65 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 PSMB11A5LHX3 300 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 GMNCA6NCL1 334 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 TMEM247A6NEH6 219 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 HNRNPCL2B2RXH8 293 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 HNRNPCL3B7ZW38 293 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 G3V2L1 256 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 ZSCAN12O43309 604 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 FMO6PO60774 539 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 HNRNPCL1O60812 293 aaKnown RBP4.18□□□□□ -1.74
HERC1-213ENST00000561359 DEDDO75618 318 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 GRPP07492 148 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 HNRNPCL4P0DMR1 293 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 NR2C1P13056 603 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 SELLP14151 372 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 MUC1P15941 1255 aaPredicted RBP4.18□□□□□ -1.74
HERC1-213ENST00000561359 NDUFB7P17568 137 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 MSR1P21757 451 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 CA6P23280 308 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 GGT2P36268 569 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 SERPINB5P36952 375 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 PAFAH1B1P43034 410 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 DAP3P51398 398 aaKnown RBP4.18□□□□□ -1.74
HERC1-213ENST00000561359 ZNF133P52736 654 aaPredicted RBP4.18□□□□□ -1.74
HERC1-213ENST00000561359 DNAJB13P59910 316 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 SCRN3Q0VDG4 424 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 RIPK1Q13546 671 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 ENDOGQ14249 297 aaKnown RBP4.18□□□□□ -1.74
HERC1-213ENST00000561359 CASP8Q14790 479 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 SSX2Q16385 188 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 ABCA11PQ4W5N1 156 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 CCDC92Q53HC0 331 aaPredicted RBP4.18□□□□□ -1.74
HERC1-213ENST00000561359 C9orf152Q5JTZ5 239 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 TEX36Q5VZQ5 186 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 WDR93Q6P2C0 686 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 C16orf89Q6UX73 402 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 Q6ZRM9 215 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 ZNF621Q6ZSS3 439 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 ZNF572Q7Z3I7 529 aaPredicted RBP4.18□□□□□ -1.74
HERC1-213ENST00000561359 NANOGNBQ7Z5D8 188 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 ARMC8Q8IUR7 673 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 ZNF695Q8IW36 515 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 MKXQ8IYA7 352 aa4.18□□□□□ -1.74
HERC1-213ENST00000561359 OSR2Q8N2R0 312 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms