RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 OR2AE1Q8NHA4 323 aa13.38□□□□□ -0.27
LMX1B-204ENST00000561065 C22orf15Q8WYQ4 148 aa13.38□□□□□ -0.27
LMX1B-204ENST00000561065 PGAM5Q96HS1 289 aa13.38□□□□□ -0.27
LMX1B-204ENST00000561065 SEMA6AQ9H2E6 1030 aa13.38□□□□□ -0.27
LMX1B-204ENST00000561065 ESM1Q9NQ30 184 aa13.38□□□□□ -0.27
LMX1B-204ENST00000561065 C14orf119Q9NWQ9 140 aa13.38□□□□□ -0.27
LMX1B-204ENST00000561065 ZNF12P17014 697 aa13.37□□□□□ -0.27
LMX1B-204ENST00000561065 CDC42P60953 191 aa13.37□□□□□ -0.27
LMX1B-204ENST00000561065 ZNF92Q03936 586 aa13.37□□□□□ -0.27
LMX1B-204ENST00000561065 KCNJ8Q15842 424 aa13.37□□□□□ -0.27
LMX1B-204ENST00000561065 ZNF181Q2M3W8 571 aa13.37□□□□□ -0.27
LMX1B-204ENST00000561065 TUSC1Q2TAM9 212 aa13.37□□□□□ -0.27
LMX1B-204ENST00000561065 PRAMEF6Q5VXH4 476 aa13.37□□□□□ -0.27
LMX1B-204ENST00000561065 SLX4IPQ5VYV7 408 aa13.37□□□□□ -0.27
LMX1B-204ENST00000561065 NXNL2Q5VZ03 156 aa13.37□□□□□ -0.27
LMX1B-204ENST00000561065 USP43Q70EL4 1123 aa13.37□□□□□ -0.27
LMX1B-204ENST00000561065 SPATC1Q76KD6 591 aa13.37□□□□□ -0.27
LMX1B-204ENST00000561065 MEPCEQ7L2J0 689 aaKnown RBP13.37□□□□□ -0.27
LMX1B-204ENST00000561065 CSNK2A3Q8NEV1 391 aa13.37□□□□□ -0.27
LMX1B-204ENST00000561065 TMEM163Q8TC26 289 aa13.37□□□□□ -0.27
LMX1B-204ENST00000561065 ZNF418Q8TF45 676 aaPredicted RBP13.37□□□□□ -0.27
LMX1B-204ENST00000561065 TRUB1Q8WWH5 349 aaKnown RBP13.37□□□□□ -0.27
LMX1B-204ENST00000561065 DVL3Q92997 716 aaPredicted RBP13.37□□□□□ -0.27
LMX1B-204ENST00000561065 RFKQ969G6 155 aa13.37□□□□□ -0.27
LMX1B-204ENST00000561065 TMEM165Q9HC07 324 aa13.37□□□□□ -0.27
LMX1B-204ENST00000561065 ABCB9Q9NP78 766 aa13.37□□□□□ -0.27
LMX1B-204ENST00000561065 OAZ3Q9UMX2 235 aa13.37□□□□□ -0.27
LMX1B-204ENST00000561065 SNTNA6NMZ2 147 aa13.36□□□□□ -0.27
LMX1B-204ENST00000561065 ZAR1LA6NP61 321 aa13.36□□□□□ -0.27
LMX1B-204ENST00000561065 SLC2A1P11166 492 aa13.36□□□□□ -0.27
LMX1B-204ENST00000561065 ATP6V1E1P36543 226 aa13.36□□□□□ -0.27
LMX1B-204ENST00000561065 OPRL1P41146 370 aa13.36□□□□□ -0.27
LMX1B-204ENST00000561065 GATA4P43694 442 aa13.36□□□□□ -0.27
LMX1B-204ENST00000561065 PAX2Q02962 417 aa13.36□□□□□ -0.27
LMX1B-204ENST00000561065 POU4F2Q12837 409 aa13.36□□□□□ -0.27
LMX1B-204ENST00000561065 ZNF154Q13106 437 aa13.36□□□□□ -0.27
LMX1B-204ENST00000561065 TMED1Q13445 227 aa13.36□□□□□ -0.27
LMX1B-204ENST00000561065 KPNB1Q14974 876 aaKnown RBP13.36□□□□□ -0.27
LMX1B-204ENST00000561065 KLF17Q5JT82 389 aaPredicted RBP13.36□□□□□ -0.27
LMX1B-204ENST00000561065 GLYATL3Q5SZD4 288 aa13.36□□□□□ -0.27
LMX1B-204ENST00000561065 TCEANCQ8N8B7 351 aa13.36□□□□□ -0.27
LMX1B-204ENST00000561065 NANPQ8TBE9 248 aa13.36□□□□□ -0.27
LMX1B-204ENST00000561065 PYDC1Q8WXC3 89 aa13.36□□□□□ -0.27
LMX1B-204ENST00000561065 SPSB4Q96A44 273 aa13.36□□□□□ -0.27
LMX1B-204ENST00000561065 DACT3Q96B18 629 aaPredicted RBP13.36□□□□□ -0.27
LMX1B-204ENST00000561065 MYCBPQ99417 103 aaPredicted RBP13.36□□□□□ -0.27
LMX1B-204ENST00000561065 CNN2Q99439 309 aaKnown RBP13.36□□□□□ -0.27
LMX1B-204ENST00000561065 FN3KRPQ9HA64 309 aa13.36□□□□□ -0.27
LMX1B-204ENST00000561065 TRIM36Q9NQ86 728 aa13.36□□□□□ -0.27
LMX1B-204ENST00000561065 INSIG2Q9Y5U4 225 aa13.36□□□□□ -0.27
LMX1B-204ENST00000561065 SELENOFO60613 162 aa13.35□□□□□ -0.27
LMX1B-204ENST00000561065 FAM20BO75063 409 aa13.35□□□□□ -0.27
LMX1B-204ENST00000561065 FSTL3O95633 263 aa13.35□□□□□ -0.27
LMX1B-204ENST00000561065 WNT2P09544 360 aa13.35□□□□□ -0.27
LMX1B-204ENST00000561065 RPS2P15880 293 aaKnown RBP13.35□□□□□ -0.27
LMX1B-204ENST00000561065 ALOX5APP20292 161 aa13.35□□□□□ -0.27
LMX1B-204ENST00000561065 SLC2A5P22732 501 aa13.35□□□□□ -0.27
LMX1B-204ENST00000561065 CA6P23280 308 aa13.35□□□□□ -0.27
LMX1B-204ENST00000561065 DCTDP32321 178 aa13.35□□□□□ -0.27
LMX1B-204ENST00000561065 GNALP38405 381 aa13.35□□□□□ -0.27
LMX1B-204ENST00000561065 CD200P41217 278 aa13.35□□□□□ -0.27
LMX1B-204ENST00000561065 MPPED2Q15777 294 aa13.35□□□□□ -0.27
LMX1B-204ENST00000561065 ZNF404Q494X3 552 aa13.35□□□□□ -0.27
LMX1B-204ENST00000561065 FAM57BQ71RH2 274 aa13.35□□□□□ -0.27
LMX1B-204ENST00000561065 ZDHHC22Q8N966 263 aa13.35□□□□□ -0.27
LMX1B-204ENST00000561065 C19orf18Q8NEA5 215 aa13.35□□□□□ -0.27
LMX1B-204ENST00000561065 OR8J1Q8NGP2 316 aa13.35□□□□□ -0.27
LMX1B-204ENST00000561065 OR8S1Q8NH09 359 aa13.35□□□□□ -0.27
LMX1B-204ENST00000561065 ZFAND2BQ8WV99 257 aa13.35□□□□□ -0.27
LMX1B-204ENST00000561065 STMN2Q93045 179 aa13.35□□□□□ -0.27
LMX1B-204ENST00000561065 REEP6Q96HR9 211 aa13.35□□□□□ -0.27
LMX1B-204ENST00000561065 CIB1Q99828 191 aa13.35□□□□□ -0.27
LMX1B-204ENST00000561065 TMEM246Q9BRR3 403 aa13.35□□□□□ -0.27
LMX1B-204ENST00000561065 IMPAD1Q9NX62 359 aa13.35□□□□□ -0.27
LMX1B-204ENST00000561065 HAO2Q9NYQ3 351 aa13.35□□□□□ -0.27
LMX1B-204ENST00000561065 WARS2Q9UGM6 360 aaKnown RBP13.35□□□□□ -0.27
LMX1B-204ENST00000561065 LRCH1Q9Y2L9 728 aa13.35□□□□□ -0.27
LMX1B-204ENST00000561065 PRKYO43930 277 aa13.34□□□□□ -0.27
LMX1B-204ENST00000561065 NAA10P41227 235 aaPredicted RBP13.34□□□□□ -0.27
LMX1B-204ENST00000561065 ZNF121P58317 390 aaPredicted RBP13.34□□□□□ -0.27
LMX1B-204ENST00000561065 ESCO2Q56NI9 601 aa13.34□□□□□ -0.27
LMX1B-204ENST00000561065 C12orf73Q69YU5 71 aa13.34□□□□□ -0.27
LMX1B-204ENST00000561065 Q8TCH9 128 aa13.34□□□□□ -0.27
LMX1B-204ENST00000561065 SGK3Q96BR1 496 aa13.34□□□□□ -0.27
LMX1B-204ENST00000561065 HIST1H2AAQ96QV6 131 aa13.34□□□□□ -0.27
LMX1B-204ENST00000561065 AMELYQ99218 206 aa13.34□□□□□ -0.27
LMX1B-204ENST00000561065 ADAT1Q9BUB4 502 aaKnown RBP13.34□□□□□ -0.27
LMX1B-204ENST00000561065 C9orf16Q9BUW7 83 aa13.34□□□□□ -0.27
LMX1B-204ENST00000561065 SSBP3Q9BWW4 388 aaPredicted RBP13.34□□□□□ -0.27
LMX1B-204ENST00000561065 RIBC2Q9H4K1 309 aa13.34□□□□□ -0.27
LMX1B-204ENST00000561065 UFSP2Q9NUQ7 469 aa13.34□□□□□ -0.27
LMX1B-204ENST00000561065 DNAJC27Q9NZQ0 273 aa13.34□□□□□ -0.27
LMX1B-204ENST00000561065 MIOXQ9UGB7 285 aa13.34□□□□□ -0.27
LMX1B-204ENST00000561065 NBEAL1Q6ZS30 2694 aa13.33□□□□□ -0.28
LMX1B-204ENST00000561065 SAC3D1A6NKF1 404 aa13.33□□□□□ -0.28
LMX1B-204ENST00000561065 ANXA2P2A6NMY6 339 aa13.33□□□□□ -0.28
LMX1B-204ENST00000561065 ZNF670-ZNF695F2Z2N8 137 aa13.33□□□□□ -0.28
LMX1B-204ENST00000561065 MITFO75030 526 aaPredicted RBP13.33□□□□□ -0.28
LMX1B-204ENST00000561065 PTBP3O95758 552 aaKnown RBP13.33□□□□□ -0.28
LMX1B-204ENST00000561065 ATP6V1B1P15313 513 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 787.9 ms