RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 TMEM100Q9NV29 134 aa8.18□□□□□ -1.1
RABGGTA-221ENST00000561055 OR52A1Q9UKL2 312 aa8.18□□□□□ -1.1
RABGGTA-221ENST00000561055 CAB39Q9Y376 341 aaPredicted RBP8.18□□□□□ -1.1
RABGGTA-221ENST00000561055 EXOSC1Q9Y3B2 195 aaKnown RBP8.18□□□□□ -1.1
RABGGTA-221ENST00000561055 HIVEP1P15822 2718 aa8.17□□□□□ -1.1
RABGGTA-221ENST00000561055 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.17□□□□□ -1.12e-12■■■□□ 16.9
RABGGTA-221ENST00000561055 C2CD3Q4AC94 2353 aa8.17□□□□□ -1.1
RABGGTA-221ENST00000561055 ACANP16112 2415 aa8.17□□□□□ -1.1
RABGGTA-221ENST00000561055 A0A1B0GTI1 187 aa8.17□□□□□ -1.1
RABGGTA-221ENST00000561055 GGT3PA6NGU5 568 aa8.17□□□□□ -1.1
RABGGTA-221ENST00000561055 DENRO43583 198 aaKnown RBP8.17□□□□□ -1.1
RABGGTA-221ENST00000561055 SPRY3O43610 288 aa8.17□□□□□ -1.1
RABGGTA-221ENST00000561055 XPNPEP2O43895 674 aa8.17□□□□□ -1.1
RABGGTA-221ENST00000561055 RP2O75695 350 aa8.17□□□□□ -1.1
RABGGTA-221ENST00000561055 NCR1O76036 304 aa8.17□□□□□ -1.1
RABGGTA-221ENST00000561055 LY6HO94772 140 aa8.17□□□□□ -1.1
RABGGTA-221ENST00000561055 CST4P01036 141 aa8.17□□□□□ -1.1
RABGGTA-221ENST00000561055 ISG15P05161 165 aa8.17□□□□□ -1.1
RABGGTA-221ENST00000561055 TNFRSF1AP19438 455 aa8.17□□□□□ -1.1
RABGGTA-221ENST00000561055 ACHEP22303 614 aa8.17□□□□□ -1.1
RABGGTA-221ENST00000561055 TNFSF4P23510 183 aa8.17□□□□□ -1.1
RABGGTA-221ENST00000561055 MAP2K3P46734 347 aa8.17□□□□□ -1.1
RABGGTA-221ENST00000561055 PDLIM4P50479 330 aa8.17□□□□□ -1.1
RABGGTA-221ENST00000561055 OR12D2P58182 307 aa8.17□□□□□ -1.1
RABGGTA-221ENST00000561055 MFGE8Q08431 387 aaPredicted RBP8.17□□□□□ -1.1
RABGGTA-221ENST00000561055 ST3GAL4Q11206 333 aa8.17□□□□□ -1.1
RABGGTA-221ENST00000561055 RIN1Q13671 783 aa8.17□□□□□ -1.1
RABGGTA-221ENST00000561055 TP53I3Q53FA7 332 aa8.17□□□□□ -1.1
RABGGTA-221ENST00000561055 CLEC2AQ6UVW9 174 aa8.17□□□□□ -1.1
RABGGTA-221ENST00000561055 FAM220AQ7Z4H9 259 aa8.17□□□□□ -1.1
RABGGTA-221ENST00000561055 ZNF525Q8N782 197 aa8.17□□□□□ -1.1
RABGGTA-221ENST00000561055 SPERTQ8NA61 448 aa8.17□□□□□ -1.1
RABGGTA-221ENST00000561055 ZNF485Q8NCK3 441 aa8.17□□□□□ -1.1
RABGGTA-221ENST00000561055 OR56B2PQ8NGI1 322 aa8.17□□□□□ -1.1
RABGGTA-221ENST00000561055 C10orf105Q8TEF2 133 aa8.17□□□□□ -1.1
RABGGTA-221ENST00000561055 SPRYD4Q8WW59 207 aaPredicted RBP8.17□□□□□ -1.1
RABGGTA-221ENST00000561055 PPP1R14AQ96A00 147 aa8.17□□□□□ -1.1
RABGGTA-221ENST00000561055 TMEM80Q96HE8 168 aa8.17□□□□□ -1.1
RABGGTA-221ENST00000561055 ZNF184Q99676 751 aaPredicted RBP8.17□□□□□ -1.1
RABGGTA-221ENST00000561055 RHNO1Q9BSD3 238 aa8.17□□□□□ -1.1
RABGGTA-221ENST00000561055 TMUB1Q9BVT8 246 aa8.17□□□□□ -1.1
RABGGTA-221ENST00000561055 EGLN1Q9GZT9 426 aa8.17□□□□□ -1.1
RABGGTA-221ENST00000561055 DUSP21Q9H596 190 aa8.17□□□□□ -1.1
RABGGTA-221ENST00000561055 DECR2Q9NUI1 292 aa8.17□□□□□ -1.1
RABGGTA-221ENST00000561055 GNG8Q9UK08 70 aa8.17□□□□□ -1.1
RABGGTA-221ENST00000561055 N6AMT1Q9Y5N5 214 aa8.17□□□□□ -1.1
RABGGTA-221ENST00000561055 V9GYS6 101 aa8.17□□□□□ -1.1
RABGGTA-221ENST00000561055 ZFHX3Q15911 3703 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 A0A096LNT2 108 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 IGHV1-69-2A0A0G2JMI3 117 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 J3QLW9 94 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 IFNL4K9M1U5 179 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 SLC1A7O00341 560 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 MTRF1O75570 445 aaKnown RBP8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 DHRS3O75911 302 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 RPP14O95059 124 aaKnown RBP8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 ABCA1O95477 2261 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 F8P00451 2351 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 RPSAP08865 295 aaKnown RBP8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 FOSL1P15407 271 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 SLC25A16P16260 332 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 ZNF19P17023 458 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 COL8A2P25067 703 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 ACKR3P25106 362 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 CD200P41217 278 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 GATA4P43694 442 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 TGM4P49221 684 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 ETV1P50549 477 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 PRSS12P56730 875 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 TMEM33P57088 247 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 SLC35A2P78381 396 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 TNFAIP6P98066 277 aaPredicted RBP8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 MVKQ03426 396 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 MAB21L1Q13394 359 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 MED21Q13503 144 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 ZNF181Q2M3W8 571 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 CCDC58Q4VC31 144 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 WDR38Q5JTN6 314 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 BCL2L15Q5TBC7 163 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 OR5AS1Q8N127 324 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 PRSS35Q8N3Z0 413 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 FTMTQ8N4E7 242 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 ZNF540Q8NDQ6 660 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 BHLHE23Q8NDY6 225 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 BPIFB6Q8NFQ5 453 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 OR2Z1Q8NG97 314 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 OR2G2Q8NGZ5 317 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 OR52N1Q8NH53 320 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 OR51E1Q8TCB6 317 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 RPS4Y2Q8TD47 263 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 FAM168AQ92567 244 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 YIPF5Q969M3 257 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 ERGIC1Q969X5 290 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 ELMOD3Q96FG2 381 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 C4orf36Q96KX1 117 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 Q96MF0 132 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 SOX7Q9BT81 388 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 ISG20L2Q9H9L3 353 aaKnown RBP8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 CHODLQ9H9P2 273 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 SAP30LQ9HAJ7 183 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms