RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 BGLAPP02818 100 aa14.65□□□□□ -0.06
TPM1-228ENST00000560975 AMY2BP19961 511 aa14.65□□□□□ -0.06
TPM1-228ENST00000560975 SLC22A24Q8N4F4 322 aa14.65□□□□□ -0.06
TPM1-228ENST00000560975 OR1J1Q8NGS3 322 aa14.65□□□□□ -0.06
TPM1-228ENST00000560975 S1PR5Q9H228 398 aa14.65□□□□□ -0.06
TPM1-228ENST00000560975 KCNJ16Q9NPI9 418 aa14.65□□□□□ -0.06
TPM1-228ENST00000560975 UFSP2Q9NUQ7 469 aa14.65□□□□□ -0.06
TPM1-228ENST00000560975 ATXN7L1Q9ULK2 861 aaPredicted RBP14.65□□□□□ -0.06
TPM1-228ENST00000560975 SRSF10O75494 262 aaKnown RBP14.64□□□□□ -0.07
TPM1-228ENST00000560975 JTBO76095 146 aa14.64□□□□□ -0.07
TPM1-228ENST00000560975 BPNT1O95861 308 aa14.64□□□□□ -0.07
TPM1-228ENST00000560975 ZNF823P16415 610 aa14.64□□□□□ -0.07
TPM1-228ENST00000560975 TBPP20226 339 aa14.64□□□□□ -0.07
TPM1-228ENST00000560975 HOXA5P20719 270 aa14.64□□□□□ -0.07
TPM1-228ENST00000560975 OR3A2P47893 321 aa14.64□□□□□ -0.07
TPM1-228ENST00000560975 SEC13P55735 322 aa14.64□□□□□ -0.07
TPM1-228ENST00000560975 ARFRP1Q13795 201 aa14.64□□□□□ -0.07
TPM1-228ENST00000560975 Q3ZCU0 254 aa14.64□□□□□ -0.07
TPM1-228ENST00000560975 SSX9Q7RTT3 188 aa14.64□□□□□ -0.07
TPM1-228ENST00000560975 ZNF321PQ8N8H1 164 aa14.64□□□□□ -0.07
TPM1-228ENST00000560975 ASB16Q96NS5 453 aa14.64□□□□□ -0.07
TPM1-228ENST00000560975 ADOQ96SZ5 270 aa14.64□□□□□ -0.07
TPM1-228ENST00000560975 CNTNAP3Q9BZ76 1288 aa14.64□□□□□ -0.07
TPM1-228ENST00000560975 PRTFDC1Q9NRG1 225 aa14.64□□□□□ -0.07
TPM1-228ENST00000560975 ZNF727A8MUV8 499 aa14.64□□□□□ -0.07
TPM1-228ENST00000560975 KAT7O95251 611 aa14.64□□□□□ -0.07
TPM1-228ENST00000560975 UTS2O95399 124 aa14.64□□□□□ -0.07
TPM1-228ENST00000560975 BCKDHBP21953 392 aa14.64□□□□□ -0.07
TPM1-228ENST00000560975 CEBPGP53567 150 aa14.64□□□□□ -0.07
TPM1-228ENST00000560975 RPS23P62266 143 aaKnown RBP14.64□□□□□ -0.07
TPM1-228ENST00000560975 FNDC7Q5VTL7 733 aa14.64□□□□□ -0.07
TPM1-228ENST00000560975 DMRTC2Q8IXT2 367 aaPredicted RBP14.64□□□□□ -0.07
TPM1-228ENST00000560975 OR10D4PQ8NGN7 298 aa14.64□□□□□ -0.07
TPM1-228ENST00000560975 C14orf144Q96I85 54 aa14.64□□□□□ -0.07
TPM1-228ENST00000560975 LPAR5Q9H1C0 372 aa14.64□□□□□ -0.07
TPM1-228ENST00000560975 FAM212BQ9NTI7 297 aaPredicted RBP14.64□□□□□ -0.07
TPM1-228ENST00000560975 MEMO1Q9Y316 297 aa14.64□□□□□ -0.07
TPM1-228ENST00000560975 ST8SIA5O15466 376 aa14.63□□□□□ -0.07
TPM1-228ENST00000560975 GUSBP08236 651 aa14.63□□□□□ -0.07
TPM1-228ENST00000560975 C5AR1P21730 350 aa14.63□□□□□ -0.07
TPM1-228ENST00000560975 FPR2P25090 351 aa14.63□□□□□ -0.07
TPM1-228ENST00000560975 GLO1Q04760 184 aa14.63□□□□□ -0.07
TPM1-228ENST00000560975 IL15RAQ13261 267 aa14.63□□□□□ -0.07
TPM1-228ENST00000560975 GLIPR1L1Q6UWM5 242 aa14.63□□□□□ -0.07
TPM1-228ENST00000560975 ZNF519Q8TB69 540 aa14.63□□□□□ -0.07
TPM1-228ENST00000560975 DEFB118Q96PH6 123 aa14.63□□□□□ -0.07
TPM1-228ENST00000560975 SCRT1Q9BWW7 348 aa14.63□□□□□ -0.07
TPM1-228ENST00000560975 GAR1Q9NY12 217 aaKnown RBP14.63□□□□□ -0.07
TPM1-228ENST00000560975 CDC14CA4D256 554 aa14.63□□□□□ -0.07
TPM1-228ENST00000560975 SYT7O43581 403 aa14.63□□□□□ -0.07
TPM1-228ENST00000560975 CD63P08962 238 aa14.63□□□□□ -0.07
TPM1-228ENST00000560975 H2BFMP0C1H6 154 aa14.63□□□□□ -0.07
TPM1-228ENST00000560975 HLA-DOBP13765 273 aa14.63□□□□□ -0.07
TPM1-228ENST00000560975 THBS4P35443 961 aa14.63□□□□□ -0.07
TPM1-228ENST00000560975 ZNF93P35789 620 aaPredicted RBP14.63□□□□□ -0.07
TPM1-228ENST00000560975 RAP1AP62834 184 aa14.63□□□□□ -0.07
TPM1-228ENST00000560975 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.63□□□□□ -0.07
TPM1-228ENST00000560975 MAMDC2Q7Z304 686 aaPredicted RBP14.63□□□□□ -0.07
TPM1-228ENST00000560975 ARRDC1Q8N5I2 433 aa14.63□□□□□ -0.07
TPM1-228ENST00000560975 ELSPBP1Q96BH3 223 aa14.63□□□□□ -0.07
TPM1-228ENST00000560975 MALSU1Q96EH3 234 aa14.63□□□□□ -0.07
TPM1-228ENST00000560975 ARHGAP5-AS1Q96IT6 56 aa14.63□□□□□ -0.07
TPM1-228ENST00000560975 CCNL2Q96S94 520 aaPredicted RBP14.63□□□□□ -0.07
TPM1-228ENST00000560975 MESP1Q9BRJ9 268 aa14.63□□□□□ -0.07
TPM1-228ENST00000560975 DOK5Q9P104 306 aa14.63□□□□□ -0.07
TPM1-228ENST00000560975 HSD11B1P28845 292 aa14.63□□□□□ -0.07
TPM1-228ENST00000560975 CDX1P47902 265 aaPredicted RBP14.63□□□□□ -0.07
TPM1-228ENST00000560975 RPUSD3Q6P087 351 aaKnown RBP14.63□□□□□ -0.07
TPM1-228ENST00000560975 ZNF529Q6P280 563 aa14.63□□□□□ -0.07
TPM1-228ENST00000560975 LYPD6BQ8NI32 183 aa14.63□□□□□ -0.07
TPM1-228ENST00000560975 MR1Q95460 341 aa14.63□□□□□ -0.07
TPM1-228ENST00000560975 SGK3Q96BR1 496 aa14.63□□□□□ -0.07
TPM1-228ENST00000560975 GNRHR2Q96P88 292 aa14.63□□□□□ -0.07
TPM1-228ENST00000560975 LMAN1LQ9HAT1 526 aa14.63□□□□□ -0.07
TPM1-228ENST00000560975 EHFQ9NZC4 300 aa14.63□□□□□ -0.07
TPM1-228ENST00000560975 URGCP-MRPS24S4R325 110 aa14.63□□□□□ -0.07
TPM1-228ENST00000560975 PCNX3Q9H6A9 2034 aa14.62□□□□□ -0.07
TPM1-228ENST00000560975 HOXC4P09017 264 aaPredicted RBP14.62□□□□□ -0.07
TPM1-228ENST00000560975 ZNF117Q03924 483 aa14.62□□□□□ -0.07
TPM1-228ENST00000560975 RHEBQ15382 184 aa14.62□□□□□ -0.07
TPM1-228ENST00000560975 ZNF674Q2M3X9 581 aa14.62□□□□□ -0.07
TPM1-228ENST00000560975 C14orf28Q4W4Y0 310 aa14.62□□□□□ -0.07
TPM1-228ENST00000560975 AADACL3Q5VUY0 350 aa14.62□□□□□ -0.07
TPM1-228ENST00000560975 UNQ6494/PRO21346Q6UXR6 183 aa14.62□□□□□ -0.07
TPM1-228ENST00000560975 Q7L0L9 218 aa14.62□□□□□ -0.07
TPM1-228ENST00000560975 PRRX2Q99811 253 aa14.62□□□□□ -0.07
TPM1-228ENST00000560975 OR11A1Q9GZK7 315 aa14.62□□□□□ -0.07
TPM1-228ENST00000560975 CHST5Q9GZS9 411 aa14.62□□□□□ -0.07
TPM1-228ENST00000560975 PRO1933Q9H354 126 aa14.62□□□□□ -0.07
TPM1-228ENST00000560975 OPA3Q9H6K4 179 aa14.62□□□□□ -0.07
TPM1-228ENST00000560975 TRAV36DV7A0A075B6V5 113 aa14.62□□□□□ -0.07
TPM1-228ENST00000560975 C2orf74A8MZ97 194 aa14.62□□□□□ -0.07
TPM1-228ENST00000560975 ISG15P05161 165 aa14.62□□□□□ -0.07
TPM1-228ENST00000560975 RNH1P13489 461 aaKnown RBP14.62□□□□□ -0.07
TPM1-228ENST00000560975 TMEM50BP56557 158 aa14.62□□□□□ -0.07
TPM1-228ENST00000560975 CSNK2A1P68400 391 aaPredicted RBP14.62□□□□□ -0.07
TPM1-228ENST00000560975 VAX1Q5SQQ9 334 aa14.62□□□□□ -0.07
TPM1-228ENST00000560975 ZNF343Q6P1L6 599 aa14.62□□□□□ -0.07
TPM1-228ENST00000560975 HEPN1Q6WQI6 88 aa14.62□□□□□ -0.07
TPM1-228ENST00000560975 COMMD2Q86X83 199 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms