RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 TMEM33P57088 247 aa13.1□□□□□ -0.31
RABGGTA-219ENST00000560871 ACTC1P68032 377 aa13.1□□□□□ -0.31
RABGGTA-219ENST00000560871 ACTA1P68133 377 aa13.1□□□□□ -0.31
RABGGTA-219ENST00000560871 IL18R1Q13478 541 aa13.1□□□□□ -0.31
RABGGTA-219ENST00000560871 DHRSXQ8N5I4 330 aa13.1□□□□□ -0.31
RABGGTA-219ENST00000560871 ADAT1Q9BUB4 502 aaKnown RBP13.1□□□□□ -0.31
RABGGTA-219ENST00000560871 PBOV1Q9GZY1 135 aa13.1□□□□□ -0.31
RABGGTA-219ENST00000560871 SLC22A4Q9H015 551 aa13.1□□□□□ -0.31
RABGGTA-219ENST00000560871 G6PC2Q9NQR9 355 aa13.1□□□□□ -0.31
RABGGTA-219ENST00000560871 MRPS18AQ9NVS2 196 aaKnown RBP13.1□□□□□ -0.31
RABGGTA-219ENST00000560871 KIAA1324LA8MWY0 1029 aaPredicted RBP13.09□□□□□ -0.31
RABGGTA-219ENST00000560871 CLDN25C9JDP6 229 aa13.09□□□□□ -0.31
RABGGTA-219ENST00000560871 F5H5P2 479 aa13.09□□□□□ -0.31
RABGGTA-219ENST00000560871 LOC110117498-PIK3R3F6TDL0 507 aa13.09□□□□□ -0.31
RABGGTA-219ENST00000560871 SULT1C4O75897 302 aa13.09□□□□□ -0.31
RABGGTA-219ENST00000560871 PTBP3O95758 552 aaKnown RBP13.09□□□□□ -0.31
RABGGTA-219ENST00000560871 IGHA1P01876 353 aa13.09□□□□□ -0.31
RABGGTA-219ENST00000560871 TTRP02766 147 aa13.09□□□□□ -0.31
RABGGTA-219ENST00000560871 CA6P23280 308 aa13.09□□□□□ -0.31
RABGGTA-219ENST00000560871 GATA4P43694 442 aa13.09□□□□□ -0.31
RABGGTA-219ENST00000560871 MAB21L1Q13394 359 aa13.09□□□□□ -0.31
RABGGTA-219ENST00000560871 SMN1Q16637 294 aaKnown RBP13.09□□□□□ -0.31
RABGGTA-219ENST00000560871 HFEQ30201 348 aa13.09□□□□□ -0.31
RABGGTA-219ENST00000560871 CDONQ4KMG0 1287 aa13.09□□□□□ -0.31
RABGGTA-219ENST00000560871 LIPNQ5VXI9 398 aa13.09□□□□□ -0.31
RABGGTA-219ENST00000560871 CNIH3Q8TBE1 160 aa13.09□□□□□ -0.31
RABGGTA-219ENST00000560871 DVL3Q92997 716 aaPredicted RBP13.09□□□□□ -0.31
RABGGTA-219ENST00000560871 PPP1R14AQ96A00 147 aa13.09□□□□□ -0.31
RABGGTA-219ENST00000560871 RNF166Q96A37 237 aaPredicted RBP13.09□□□□□ -0.31
RABGGTA-219ENST00000560871 SIGLEC11Q96RL6 698 aa13.09□□□□□ -0.31
RABGGTA-219ENST00000560871 ZNF649Q9BS31 505 aa13.09□□□□□ -0.31
RABGGTA-219ENST00000560871 VCXQ9H320 206 aa13.09□□□□□ -0.31
RABGGTA-219ENST00000560871 GCM1Q9NP62 436 aa13.09□□□□□ -0.31
RABGGTA-219ENST00000560871 AMBNQ9NP70 447 aa13.09□□□□□ -0.31
RABGGTA-219ENST00000560871 DCAF16Q9NXF7 216 aa13.09□□□□□ -0.31
RABGGTA-219ENST00000560871 TREM2Q9NZC2 230 aa13.09□□□□□ -0.31
RABGGTA-219ENST00000560871 METTL15A6NJ78 407 aa13.08□□□□□ -0.32
RABGGTA-219ENST00000560871 A8MV72 311 aaPredicted RBP13.08□□□□□ -0.32
RABGGTA-219ENST00000560871 H0YHG0 523 aa13.08□□□□□ -0.32
RABGGTA-219ENST00000560871 WNT9BO14905 357 aa13.08□□□□□ -0.32
RABGGTA-219ENST00000560871 PPIHO43447 177 aaKnown RBP13.08□□□□□ -0.32
RABGGTA-219ENST00000560871 GNAO1P09471 354 aa13.08□□□□□ -0.32
RABGGTA-219ENST00000560871 RBMXP38159 391 aaKnown RBP13.08□□□□□ -0.32
RABGGTA-219ENST00000560871 SRP9P49458 86 aaKnown RBP13.08□□□□□ -0.32
RABGGTA-219ENST00000560871 RAB40BQ12829 278 aa13.08□□□□□ -0.32
RABGGTA-219ENST00000560871 C6orf52Q5T4I8 152 aa13.08□□□□□ -0.32
RABGGTA-219ENST00000560871 ACBD7Q8N6N7 88 aa13.08□□□□□ -0.32
RABGGTA-219ENST00000560871 CELF2-AS1Q8N7Q2 184 aa13.08□□□□□ -0.32
RABGGTA-219ENST00000560871 SETD9Q8NE22 299 aa13.08□□□□□ -0.32
RABGGTA-219ENST00000560871 CCL17Q92583 94 aa13.08□□□□□ -0.32
RABGGTA-219ENST00000560871 RORBQ92753 470 aa13.08□□□□□ -0.32
RABGGTA-219ENST00000560871 TMEM106BQ9NUM4 274 aa13.08□□□□□ -0.32
RABGGTA-219ENST00000560871 ACOXLQ9NUZ1 547 aa13.08□□□□□ -0.32
RABGGTA-219ENST00000560871 OR52A1Q9UKL2 312 aa13.08□□□□□ -0.32
RABGGTA-219ENST00000560871 MYRFQ9Y2G1 1151 aa13.08□□□□□ -0.32
RABGGTA-219ENST00000560871 NOP16Q9Y3C1 178 aaKnown RBP13.08□□□□□ -0.32
RABGGTA-219ENST00000560871 WIPI2Q9Y4P8 454 aa13.08□□□□□ -0.32
RABGGTA-219ENST00000560871 PCDHGB1Q9Y5G3 927 aa13.08□□□□□ -0.32
RABGGTA-219ENST00000560871 HSPE1-MOB4S4R3N1 261 aa13.08□□□□□ -0.32
RABGGTA-219ENST00000560871 LRP5LA4QPB2 252 aa13.07□□□□□ -0.32
RABGGTA-219ENST00000560871 H0YJX3 145 aa13.07□□□□□ -0.32
RABGGTA-219ENST00000560871 GMDSO60547 372 aa13.07□□□□□ -0.32
RABGGTA-219ENST00000560871 RPP14O95059 124 aaKnown RBP13.07□□□□□ -0.32
RABGGTA-219ENST00000560871 IGHV4-31P0DP07 118 aa13.07□□□□□ -0.32
RABGGTA-219ENST00000560871 IL2RGP31785 369 aa13.07□□□□□ -0.32
RABGGTA-219ENST00000560871 CHN2P52757 468 aa13.07□□□□□ -0.32
RABGGTA-219ENST00000560871 AQP4P55087 323 aa13.07□□□□□ -0.32
RABGGTA-219ENST00000560871 OR8G1Q15617 311 aa13.07□□□□□ -0.32
RABGGTA-219ENST00000560871 TP53I3Q53FA7 332 aa13.07□□□□□ -0.32
RABGGTA-219ENST00000560871 AVPI1Q5T686 147 aa13.07□□□□□ -0.32
RABGGTA-219ENST00000560871 BCL2L15Q5TBC7 163 aa13.07□□□□□ -0.32
RABGGTA-219ENST00000560871 CYB5R2Q6BCY4 276 aa13.07□□□□□ -0.32
RABGGTA-219ENST00000560871 LAIR2Q6ISS4 152 aa13.07□□□□□ -0.32
RABGGTA-219ENST00000560871 Q6ZSR3 168 aa13.07□□□□□ -0.32
RABGGTA-219ENST00000560871 KRT74Q7RTS7 529 aa13.07□□□□□ -0.32
RABGGTA-219ENST00000560871 CATSPERDQ86XM0 798 aa13.07□□□□□ -0.32
RABGGTA-219ENST00000560871 KLBQ86Z14 1044 aa13.07□□□□□ -0.32
RABGGTA-219ENST00000560871 ELMOD2Q8IZ81 293 aa13.07□□□□□ -0.32
RABGGTA-219ENST00000560871 YIPF7Q8N8F6 280 aa13.07□□□□□ -0.32
RABGGTA-219ENST00000560871 PLPP7Q8NBV4 271 aa13.07□□□□□ -0.32
RABGGTA-219ENST00000560871 CSNK2A3Q8NEV1 391 aa13.07□□□□□ -0.32
RABGGTA-219ENST00000560871 OR52I1Q8NGK6 324 aa13.07□□□□□ -0.32
RABGGTA-219ENST00000560871 CLDND2Q8NHS1 167 aa13.07□□□□□ -0.32
RABGGTA-219ENST00000560871 OR51E1Q8TCB6 317 aa13.07□□□□□ -0.32
RABGGTA-219ENST00000560871 FBLIM1Q8WUP2 373 aa13.07□□□□□ -0.32
RABGGTA-219ENST00000560871 TFAP2CQ92754 450 aa13.07□□□□□ -0.32
RABGGTA-219ENST00000560871 PPP1R3EQ9H7J1 279 aa13.07□□□□□ -0.32
RABGGTA-219ENST00000560871 GPR84Q9NQS5 396 aa13.07□□□□□ -0.32
RABGGTA-219ENST00000560871 PPP1R3CQ9UQK1 317 aa13.07□□□□□ -0.32
RABGGTA-219ENST00000560871 RHBDD3Q9Y3P4 386 aa13.07□□□□□ -0.32
RABGGTA-219ENST00000560871 RPL36Q9Y3U8 105 aaKnown RBP13.07□□□□□ -0.32
RABGGTA-219ENST00000560871 SNX5Q9Y5X3 404 aa13.07□□□□□ -0.32
RABGGTA-219ENST00000560871 LOC100289279A0A1B0GTE1 492 aa13.06□□□□□ -0.32
RABGGTA-219ENST00000560871 A0A1B0GTI1 187 aa13.06□□□□□ -0.32
RABGGTA-219ENST00000560871 DAPL1A0PJW8 107 aa13.06□□□□□ -0.32
RABGGTA-219ENST00000560871 ANKRD30BLA7E2S9 258 aa13.06□□□□□ -0.32
RABGGTA-219ENST00000560871 FAM20BO75063 409 aa13.06□□□□□ -0.32
RABGGTA-219ENST00000560871 ATP6V1B1P15313 513 aa13.06□□□□□ -0.32
RABGGTA-219ENST00000560871 CCL1P22362 96 aa13.06□□□□□ -0.32
RABGGTA-219ENST00000560871 SLC3A1Q07837 685 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms