RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 OR2T7P0C7T2 308 aa12.85□□□□□ -0.35
SNRPA1-213ENST00000560856 CFL1P23528 166 aaKnown RBP12.85□□□□□ -0.35
SNRPA1-213ENST00000560856 RIDAP52758 137 aaKnown RBP12.85□□□□□ -0.35
SNRPA1-213ENST00000560856 EGR3Q06889 387 aa12.85□□□□□ -0.35
SNRPA1-213ENST00000560856 MFGE8Q08431 387 aaPredicted RBP12.85□□□□□ -0.35
SNRPA1-213ENST00000560856 OR8G1Q15617 311 aa12.85□□□□□ -0.35
SNRPA1-213ENST00000560856 MPPED2Q15777 294 aa12.85□□□□□ -0.35
SNRPA1-213ENST00000560856 MEDAGQ5VYS4 303 aa12.85□□□□□ -0.35
SNRPA1-213ENST00000560856 LPCAT4Q643R3 524 aa12.85□□□□□ -0.35
SNRPA1-213ENST00000560856 KRT74Q7RTS7 529 aa12.85□□□□□ -0.35
SNRPA1-213ENST00000560856 MOGAT3Q86VF5 341 aa12.85□□□□□ -0.35
SNRPA1-213ENST00000560856 LRRC28Q86X40 367 aaPredicted RBP12.85□□□□□ -0.35
SNRPA1-213ENST00000560856 LINC01356Q8N9X3 169 aa12.85□□□□□ -0.35
SNRPA1-213ENST00000560856 OR2T27Q8NH04 317 aa12.85□□□□□ -0.35
SNRPA1-213ENST00000560856 Q8TCH9 128 aa12.85□□□□□ -0.35
SNRPA1-213ENST00000560856 DVL3Q92997 716 aaPredicted RBP12.85□□□□□ -0.35
SNRPA1-213ENST00000560856 RFKQ969G6 155 aa12.85□□□□□ -0.35
SNRPA1-213ENST00000560856 TIMD4Q96H15 378 aa12.85□□□□□ -0.35
SNRPA1-213ENST00000560856 RDH12Q96NR8 316 aa12.85□□□□□ -0.35
SNRPA1-213ENST00000560856 PBOV1Q9GZY1 135 aa12.85□□□□□ -0.35
SNRPA1-213ENST00000560856 G6PC2Q9NQR9 355 aa12.85□□□□□ -0.35
SNRPA1-213ENST00000560856 TMEM160Q9NX00 188 aa12.85□□□□□ -0.35
SNRPA1-213ENST00000560856 NUFIP1Q9UHK0 495 aaKnown RBP12.85□□□□□ -0.35
SNRPA1-213ENST00000560856 IKZF2Q9UKS7 526 aa12.85□□□□□ -0.35
SNRPA1-213ENST00000560856 SVEP1Q4LDE5 3571 aa12.84□□□□□ -0.35
SNRPA1-213ENST00000560856 IFNL4K9M1U5 179 aa12.84□□□□□ -0.35
SNRPA1-213ENST00000560856 PEX2P28328 305 aa12.84□□□□□ -0.35
SNRPA1-213ENST00000560856 MTNR1AP48039 350 aa12.84□□□□□ -0.35
SNRPA1-213ENST00000560856 ZNF85Q03923 595 aa12.84□□□□□ -0.35
SNRPA1-213ENST00000560856 ZMYND11Q15326 602 aa12.84□□□□□ -0.35
SNRPA1-213ENST00000560856 GFOD2Q3B7J2 385 aa12.84□□□□□ -0.35
SNRPA1-213ENST00000560856 PRAMEF6Q5VXH4 476 aa12.84□□□□□ -0.35
SNRPA1-213ENST00000560856 FAM166AQ6J272 317 aa12.84□□□□□ -0.35
SNRPA1-213ENST00000560856 PLEKHG7Q6ZR37 379 aa12.84□□□□□ -0.35
SNRPA1-213ENST00000560856 KLBQ86Z14 1044 aa12.84□□□□□ -0.35
SNRPA1-213ENST00000560856 GALNT4Q8N4A0 578 aa12.84□□□□□ -0.35
SNRPA1-213ENST00000560856 ERGIC1Q969X5 290 aa12.84□□□□□ -0.35
SNRPA1-213ENST00000560856 RNF166Q96A37 237 aaPredicted RBP12.84□□□□□ -0.35
SNRPA1-213ENST00000560856 TBX5Q99593 518 aa12.84□□□□□ -0.35
SNRPA1-213ENST00000560856 ADAT1Q9BUB4 502 aaKnown RBP12.84□□□□□ -0.35
SNRPA1-213ENST00000560856 ZNF665Q9H7R5 613 aa12.84□□□□□ -0.35
SNRPA1-213ENST00000560856 SMPD3Q9NY59 655 aaPredicted RBP12.84□□□□□ -0.35
SNRPA1-213ENST00000560856 ZNF391Q9UJN7 358 aa12.84□□□□□ -0.35
SNRPA1-213ENST00000560856 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.84□□□□□ -0.35
SNRPA1-213ENST00000560856 NOP16Q9Y3C1 178 aaKnown RBP12.84□□□□□ -0.35
SNRPA1-213ENST00000560856 RHBDD3Q9Y3P4 386 aa12.84□□□□□ -0.35
SNRPA1-213ENST00000560856 ARHGAP32A7KAX9 2087 aa12.84□□□□□ -0.35
SNRPA1-213ENST00000560856 WNK2Q9Y3S1 2297 aa12.83□□□□□ -0.35
SNRPA1-213ENST00000560856 B4DSR2 109 aa12.83□□□□□ -0.36
SNRPA1-213ENST00000560856 CASQ2O14958 399 aaPredicted RBP12.83□□□□□ -0.36
SNRPA1-213ENST00000560856 FAM20BO75063 409 aa12.83□□□□□ -0.36
SNRPA1-213ENST00000560856 FSTL3O95633 263 aa12.83□□□□□ -0.36
SNRPA1-213ENST00000560856 CYB5R3P00387 301 aaPredicted RBP12.83□□□□□ -0.36
SNRPA1-213ENST00000560856 TTRP02766 147 aa12.83□□□□□ -0.36
SNRPA1-213ENST00000560856 ISL1P61371 349 aa12.83□□□□□ -0.36
SNRPA1-213ENST00000560856 ELF3P78545 371 aaPredicted RBP12.83□□□□□ -0.36
SNRPA1-213ENST00000560856 LRRC36Q1X8D7 754 aa12.83□□□□□ -0.36
SNRPA1-213ENST00000560856 ZNF829Q3KNS6 432 aaPredicted RBP12.83□□□□□ -0.36
SNRPA1-213ENST00000560856 TMEM155Q4W5P6 130 aa12.83□□□□□ -0.36
SNRPA1-213ENST00000560856 PEG10Q86TG7 708 aaKnown RBP12.83□□□□□ -0.36
SNRPA1-213ENST00000560856 WDR86Q86TI4 376 aa12.83□□□□□ -0.36
SNRPA1-213ENST00000560856 C11orf53Q8IXP5 236 aa12.83□□□□□ -0.36
SNRPA1-213ENST00000560856 SPERTQ8NA61 448 aa12.83□□□□□ -0.36
SNRPA1-213ENST00000560856 PLPP7Q8NBV4 271 aa12.83□□□□□ -0.36
SNRPA1-213ENST00000560856 CSNK2A3Q8NEV1 391 aa12.83□□□□□ -0.36
SNRPA1-213ENST00000560856 OR10H4Q8NGA5 316 aa12.83□□□□□ -0.36
SNRPA1-213ENST00000560856 APH1BQ8WW43 257 aa12.83□□□□□ -0.36
SNRPA1-213ENST00000560856 RNFT2Q96EX2 444 aa12.83□□□□□ -0.36
SNRPA1-213ENST00000560856 FGF23Q9GZV9 251 aaPredicted RBP12.83□□□□□ -0.36
SNRPA1-213ENST00000560856 TMEM165Q9HC07 324 aa12.83□□□□□ -0.36
SNRPA1-213ENST00000560856 EXOGQ9Y2C4 368 aaKnown RBP12.83□□□□□ -0.36
SNRPA1-213ENST00000560856 R4GMQ9 66 aa12.83□□□□□ -0.36
SNRPA1-213ENST00000560856 A0A1B0GTI1 187 aa12.82□□□□□ -0.36
SNRPA1-213ENST00000560856 ANKRD30BLA7E2S9 258 aa12.82□□□□□ -0.36
SNRPA1-213ENST00000560856 CST4P01036 141 aa12.82□□□□□ -0.36
SNRPA1-213ENST00000560856 DVL1P1P54792 670 aaPredicted RBP12.82□□□□□ -0.36
SNRPA1-213ENST00000560856 BTG1P62324 171 aa12.82□□□□□ -0.36
SNRPA1-213ENST00000560856 FAM201AQ5SY85 155 aa12.82□□□□□ -0.36
SNRPA1-213ENST00000560856 OGFRL1Q5TC84 451 aaPredicted RBP12.82□□□□□ -0.36
SNRPA1-213ENST00000560856 LIPNQ5VXI9 398 aa12.82□□□□□ -0.36
SNRPA1-213ENST00000560856 Q6ZSR3 168 aa12.82□□□□□ -0.36
SNRPA1-213ENST00000560856 ELMOD2Q8IZ81 293 aa12.82□□□□□ -0.36
SNRPA1-213ENST00000560856 PACRGLQ8N7B6 248 aa12.82□□□□□ -0.36
SNRPA1-213ENST00000560856 OR51E1Q8TCB6 317 aa12.82□□□□□ -0.36
SNRPA1-213ENST00000560856 RORBQ92753 470 aa12.82□□□□□ -0.36
SNRPA1-213ENST00000560856 ITFG2Q969R8 447 aa12.82□□□□□ -0.36
SNRPA1-213ENST00000560856 LGALS12Q96DT0 336 aa12.82□□□□□ -0.36
SNRPA1-213ENST00000560856 ITPKCQ96DU7 683 aa12.82□□□□□ -0.36
SNRPA1-213ENST00000560856 GAL3ST1Q99999 423 aa12.82□□□□□ -0.36
SNRPA1-213ENST00000560856 GPR84Q9NQS5 396 aa12.82□□□□□ -0.36
SNRPA1-213ENST00000560856 UFSP2Q9NUQ7 469 aa12.82□□□□□ -0.36
SNRPA1-213ENST00000560856 KCNS2Q9ULS6 477 aa12.82□□□□□ -0.36
SNRPA1-213ENST00000560856 METTL15A6NJ78 407 aa12.81□□□□□ -0.36
SNRPA1-213ENST00000560856 F5H0A9 414 aaPredicted RBP12.81□□□□□ -0.36
SNRPA1-213ENST00000560856 LOC110117498-PIK3R3F6TDL0 507 aa12.81□□□□□ -0.36
SNRPA1-213ENST00000560856 MPZL2O60487 215 aa12.81□□□□□ -0.36
SNRPA1-213ENST00000560856 WBP4O75554 376 aaKnown RBP12.81□□□□□ -0.36
SNRPA1-213ENST00000560856 SULT1C4O75897 302 aa12.81□□□□□ -0.36
SNRPA1-213ENST00000560856 ZNF205O95201 554 aa12.81□□□□□ -0.36
SNRPA1-213ENST00000560856 MSMBP08118 114 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms