RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 OR51G2Q8NGK0 314 aa10.91□□□□□ -0.66
CTDSPL2-209ENST00000560620 ASB17Q8WXJ9 295 aa10.91□□□□□ -0.66
CTDSPL2-209ENST00000560620 ERGIC1Q969X5 290 aa10.91□□□□□ -0.66
CTDSPL2-209ENST00000560620 SPSB4Q96A44 273 aa10.91□□□□□ -0.66
CTDSPL2-209ENST00000560620 RGCCQ9H4X1 137 aa10.91□□□□□ -0.66
CTDSPL2-209ENST00000560620 PATZ1Q9HBE1 687 aaKnown RBP10.91□□□□□ -0.66
CTDSPL2-209ENST00000560620 PPIAL4EA0A075B759 164 aa10.9□□□□□ -0.66
CTDSPL2-209ENST00000560620 hCG_38984A0A1B0GV85 526 aa10.9□□□□□ -0.66
CTDSPL2-209ENST00000560620 A0A1B0GWJ7 208 aa10.9□□□□□ -0.66
CTDSPL2-209ENST00000560620 ZNF670-ZNF695F2Z2N8 137 aa10.9□□□□□ -0.66
CTDSPL2-209ENST00000560620 PPIAL4DF5H284 164 aa10.9□□□□□ -0.66
CTDSPL2-209ENST00000560620 H3BNX3 289 aa10.9□□□□□ -0.66
CTDSPL2-209ENST00000560620 PHYHO14832 338 aa10.9□□□□□ -0.66
CTDSPL2-209ENST00000560620 FOXH1O75593 365 aa10.9□□□□□ -0.66
CTDSPL2-209ENST00000560620 PPIAL4FP0DN26 164 aa10.9□□□□□ -0.66
CTDSPL2-209ENST00000560620 GATA4P43694 442 aa10.9□□□□□ -0.66
CTDSPL2-209ENST00000560620 RIDAP52758 137 aaKnown RBP10.9□□□□□ -0.66
CTDSPL2-209ENST00000560620 CXCR4P61073 352 aa10.9□□□□□ -0.66
CTDSPL2-209ENST00000560620 SNCBQ16143 134 aa10.9□□□□□ -0.66
CTDSPL2-209ENST00000560620 ZNF181Q2M3W8 571 aa10.9□□□□□ -0.66
CTDSPL2-209ENST00000560620 ZNF829Q3KNS6 432 aaPredicted RBP10.9□□□□□ -0.66
CTDSPL2-209ENST00000560620 ZIK1Q3SY52 487 aaPredicted RBP10.9□□□□□ -0.66
CTDSPL2-209ENST00000560620 FAM201AQ5SY85 155 aa10.9□□□□□ -0.66
CTDSPL2-209ENST00000560620 AADACL4Q5VUY2 407 aa10.9□□□□□ -0.66
CTDSPL2-209ENST00000560620 PRSS45Q7RTY3 260 aa10.9□□□□□ -0.66
CTDSPL2-209ENST00000560620 ZNF679Q8IYX0 411 aa10.9□□□□□ -0.66
CTDSPL2-209ENST00000560620 C19orf18Q8NEA5 215 aa10.9□□□□□ -0.66
CTDSPL2-209ENST00000560620 DEFB108BQ8NET1 73 aa10.9□□□□□ -0.66
CTDSPL2-209ENST00000560620 CSNK2A3Q8NEV1 391 aa10.9□□□□□ -0.66
CTDSPL2-209ENST00000560620 OR8J1Q8NGP2 316 aa10.9□□□□□ -0.66
CTDSPL2-209ENST00000560620 STMN2Q93045 179 aa10.9□□□□□ -0.66
CTDSPL2-209ENST00000560620 TBX5Q99593 518 aa10.9□□□□□ -0.66
CTDSPL2-209ENST00000560620 GABARAPL3Q9BY60 117 aa10.9□□□□□ -0.66
CTDSPL2-209ENST00000560620 OCEL1Q9H607 264 aa10.9□□□□□ -0.66
CTDSPL2-209ENST00000560620 METTL17Q9H7H0 456 aaPredicted RBP10.9□□□□□ -0.66
CTDSPL2-209ENST00000560620 C1orf123Q9NWV4 160 aa10.9□□□□□ -0.66
CTDSPL2-209ENST00000560620 ZNF319Q9P2F9 582 aa10.9□□□□□ -0.66
CTDSPL2-209ENST00000560620 RNF7Q9UBF6 113 aa10.9□□□□□ -0.66
CTDSPL2-209ENST00000560620 COPS3Q9UNS2 423 aa10.9□□□□□ -0.66
CTDSPL2-209ENST00000560620 PPIAL4AQ9Y536 164 aa10.9□□□□□ -0.66
CTDSPL2-209ENST00000560620 ANK3Q12955 4377 aaKnown RBP10.89□□□□□ -0.67
CTDSPL2-209ENST00000560620 ANXA2P2A6NMY6 339 aa10.89□□□□□ -0.67
CTDSPL2-209ENST00000560620 CEACAM18A8MTB9 384 aa10.89□□□□□ -0.67
CTDSPL2-209ENST00000560620 PHF1O43189 567 aaPredicted RBP10.89□□□□□ -0.67
CTDSPL2-209ENST00000560620 ZNF254O75437 659 aa10.89□□□□□ -0.67
CTDSPL2-209ENST00000560620 APOL3O95236 402 aa10.89□□□□□ -0.67
CTDSPL2-209ENST00000560620 BAG2O95816 211 aa10.89□□□□□ -0.67
CTDSPL2-209ENST00000560620 ALPLP05186 524 aa10.89□□□□□ -0.67
CTDSPL2-209ENST00000560620 PMELP40967 661 aa10.89□□□□□ -0.67
CTDSPL2-209ENST00000560620 ALDH3A2P51648 485 aa10.89□□□□□ -0.67
CTDSPL2-209ENST00000560620 SEC61A1P61619 476 aaKnown RBP10.89□□□□□ -0.67
CTDSPL2-209ENST00000560620 GNB2P62879 340 aa10.89□□□□□ -0.67
CTDSPL2-209ENST00000560620 OR8B8Q15620 311 aa10.89□□□□□ -0.67
CTDSPL2-209ENST00000560620 DEGS2Q6QHC5 323 aa10.89□□□□□ -0.67
CTDSPL2-209ENST00000560620 ZNF322Q6U7Q0 402 aaPredicted RBP10.89□□□□□ -0.67
CTDSPL2-209ENST00000560620 KCTD8Q6ZWB6 473 aa10.89□□□□□ -0.67
CTDSPL2-209ENST00000560620 NLRC3Q7RTR2 1065 aa10.89□□□□□ -0.67
CTDSPL2-209ENST00000560620 CBR4Q8N4T8 237 aa10.89□□□□□ -0.67
CTDSPL2-209ENST00000560620 OR8B12Q8NGG6 310 aa10.89□□□□□ -0.67
CTDSPL2-209ENST00000560620 PIGCQ92535 297 aa10.89□□□□□ -0.67
CTDSPL2-209ENST00000560620 RFKQ969G6 155 aa10.89□□□□□ -0.67
CTDSPL2-209ENST00000560620 OR8B4Q96RC9 309 aa10.89□□□□□ -0.67
CTDSPL2-209ENST00000560620 TMEM165Q9HC07 324 aa10.89□□□□□ -0.67
CTDSPL2-209ENST00000560620 CLN6Q9NWW5 311 aa10.89□□□□□ -0.67
CTDSPL2-209ENST00000560620 OR5V1Q9UGF6 321 aa10.89□□□□□ -0.67
CTDSPL2-209ENST00000560620 WARS2Q9UGM6 360 aaKnown RBP10.89□□□□□ -0.67
CTDSPL2-209ENST00000560620 METRNQ9UJH8 293 aa10.89□□□□□ -0.67
CTDSPL2-209ENST00000560620 ZNF391Q9UJN7 358 aa10.89□□□□□ -0.67
CTDSPL2-209ENST00000560620 RHBDD3Q9Y3P4 386 aa10.89□□□□□ -0.67
CTDSPL2-209ENST00000560620 LOC105371242A0A075B767 164 aa10.88□□□□□ -0.67
CTDSPL2-209ENST00000560620 ZNF850A8MQ14 1090 aa10.88□□□□□ -0.67
CTDSPL2-209ENST00000560620 RNF212BA8MTL3 300 aa10.88□□□□□ -0.67
CTDSPL2-209ENST00000560620 C3orf80F5H4A9 247 aa10.88□□□□□ -0.67
CTDSPL2-209ENST00000560620 MAGEB4O15481 346 aaPredicted RBP10.88□□□□□ -0.67
CTDSPL2-209ENST00000560620 GATA3P23771 443 aa10.88□□□□□ -0.67
CTDSPL2-209ENST00000560620 ZFP36P26651 326 aaKnown RBP10.88□□□□□ -0.67
CTDSPL2-209ENST00000560620 EFNB1P98172 346 aa10.88□□□□□ -0.67
CTDSPL2-209ENST00000560620 POU4F2Q12837 409 aa10.88□□□□□ -0.67
CTDSPL2-209ENST00000560620 SCGB2A2Q13296 93 aa10.88□□□□□ -0.67
CTDSPL2-209ENST00000560620 ZNF404Q494X3 552 aa10.88□□□□□ -0.67
CTDSPL2-209ENST00000560620 SFRP4Q6FHJ7 346 aaPredicted RBP10.88□□□□□ -0.67
CTDSPL2-209ENST00000560620 ZNF826PQ6ZT77 177 aa10.88□□□□□ -0.67
CTDSPL2-209ENST00000560620 THAP5Q7Z6K1 395 aa10.88□□□□□ -0.67
CTDSPL2-209ENST00000560620 RFLNBQ8N5W9 214 aa10.88□□□□□ -0.67
CTDSPL2-209ENST00000560620 TEX29Q8N6K0 151 aa10.88□□□□□ -0.67
CTDSPL2-209ENST00000560620 PLPP7Q8NBV4 271 aa10.88□□□□□ -0.67
CTDSPL2-209ENST00000560620 OR10H4Q8NGA5 316 aa10.88□□□□□ -0.67
CTDSPL2-209ENST00000560620 OR8B3Q8NGG8 313 aa10.88□□□□□ -0.67
CTDSPL2-209ENST00000560620 Q8TCH9 128 aa10.88□□□□□ -0.67
CTDSPL2-209ENST00000560620 EME1Q96AY2 570 aa10.88□□□□□ -0.67
CTDSPL2-209ENST00000560620 FAM71F1Q96KD3 344 aaPredicted RBP10.88□□□□□ -0.67
CTDSPL2-209ENST00000560620 HIST1H2AAQ96QV6 131 aa10.88□□□□□ -0.67
CTDSPL2-209ENST00000560620 OR8B2Q96RD0 313 aa10.88□□□□□ -0.67
CTDSPL2-209ENST00000560620 MNTQ99583 582 aa10.88□□□□□ -0.67
CTDSPL2-209ENST00000560620 APOL4Q9BPW4 351 aa10.88□□□□□ -0.67
CTDSPL2-209ENST00000560620 MICU1Q9BPX6 476 aa10.88□□□□□ -0.67
CTDSPL2-209ENST00000560620 TMEM246Q9BRR3 403 aa10.88□□□□□ -0.67
CTDSPL2-209ENST00000560620 C9orf16Q9BUW7 83 aa10.88□□□□□ -0.67
CTDSPL2-209ENST00000560620 RTL8AQ9BWD3 113 aa10.88□□□□□ -0.67
CTDSPL2-209ENST00000560620 SSBP3Q9BWW4 388 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms