RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 FAM32AQ9Y421 112 aaKnown RBP8.62□□□□□ -1.03
CDC42BPB-207ENST00000560492 LOC100653049A0A140TA62 436 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 A0A1B0GW55 424 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 A0A1B0GWJ7 208 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 A0A1W2PQ09 198 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 UNC119BA6NIH7 251 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 ANKRD30BLA7E2S9 258 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 BBIP1A8MTZ0 92 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 FXYD1O00168 92 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 DCTN6O00399 190 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 FFAR1O14842 300 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 XPNPEP2O43895 674 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 KRT34O76011 436 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 DUX4L2P0CJ85 424 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 DUX4L3P0CJ86 424 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 DUX4L4P0CJ87 422 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 DUX4L5P0CJ88 424 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 DUX4L6P0CJ89 424 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 DUX4L7P0CJ90 424 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 SAA4P35542 130 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 SLC7A2P52569 658 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 HIST1H3AP68431 136 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 ZNF92Q03936 586 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 MAPRE2Q15555 327 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 PCK2Q16822 640 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 RFX4Q33E94 735 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 SNAI3Q3KNW1 292 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 OXLD1Q5BKU9 147 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 LRRC10Q5BKY1 277 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 WDR38Q5JTN6 314 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 HIST2H3PS2Q5TEC6 136 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 SLC18B1Q6NT16 456 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 DUX4L9Q6RFH8 374 aaPredicted RBP8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 DPY19L2P2Q6ZN68 376 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 COLCA1Q6ZS62 124 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 HIST2H3AQ71DI3 136 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 DPY19L4Q7Z388 723 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 TSEN54Q7Z6J9 526 aaKnown RBP8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 GCSAMQ8N6F7 178 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 FAM216BQ8N7L0 139 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 PLPP7Q8NBV4 271 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 FAM156AQ8NDB6 213 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 SLC26A10Q8NG04 563 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 OR4S1Q8NGB4 309 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 OR56B2PQ8NGI1 322 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 OR51G2Q8NGK0 314 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 FANK1Q8TC84 345 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 STON2Q8WXE9 905 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 HSH2DQ96JZ2 352 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 NMNAT3Q96T66 252 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 MRGBPQ9NV56 204 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 DUX4Q9UBX2 424 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 FBLN5Q9UBX5 448 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 B9D1Q9UPM9 204 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 SIGLEC7Q9Y286 467 aa8.61□□□□□ -1.03
CDC42BPB-207ENST00000560492 IGLV1-36A0A0B4J1U3 117 aa8.6□□□□□ -1.03
CDC42BPB-207ENST00000560492 NKX6-3A6NJ46 265 aa8.6□□□□□ -1.03
CDC42BPB-207ENST00000560492 RNASEK-C17orf49H0YIS7 233 aa8.6□□□□□ -1.03
CDC42BPB-207ENST00000560492 CXCR6O00574 342 aa8.6□□□□□ -1.03
CDC42BPB-207ENST00000560492 TBX1O43435 398 aa8.6□□□□□ -1.03
CDC42BPB-207ENST00000560492 SERPINA1P01009 418 aa8.6□□□□□ -1.03
CDC42BPB-207ENST00000560492 NPPAP01160 153 aa8.6□□□□□ -1.03
CDC42BPB-207ENST00000560492 H1F0P07305 194 aaKnown RBP8.6□□□□□ -1.03
CDC42BPB-207ENST00000560492 PRKXP51817 358 aa8.6□□□□□ -1.03
CDC42BPB-207ENST00000560492 ELF3P78545 371 aaPredicted RBP8.6□□□□□ -1.03
CDC42BPB-207ENST00000560492 BLMHQ13867 455 aa8.6□□□□□ -1.03
CDC42BPB-207ENST00000560492 RSPO1Q2MKA7 263 aaPredicted RBP8.6□□□□□ -1.03
CDC42BPB-207ENST00000560492 ARSJQ5FYB0 599 aaPredicted RBP8.6□□□□□ -1.03
CDC42BPB-207ENST00000560492 GLYATL3Q5SZD4 288 aa8.6□□□□□ -1.03
CDC42BPB-207ENST00000560492 ZBTB37Q5TC79 503 aa8.6□□□□□ -1.03
CDC42BPB-207ENST00000560492 PGBD2Q6P3X8 592 aa8.6□□□□□ -1.03
CDC42BPB-207ENST00000560492 SMARCD3Q6STE5 483 aa8.6□□□□□ -1.03
CDC42BPB-207ENST00000560492 OR6V1Q8N148 313 aa8.6□□□□□ -1.03
CDC42BPB-207ENST00000560492 SDR9C7Q8NEX9 313 aa8.6□□□□□ -1.03
CDC42BPB-207ENST00000560492 OR5T2Q8NGG2 359 aa8.6□□□□□ -1.03
CDC42BPB-207ENST00000560492 OR4K13Q8NH42 304 aa8.6□□□□□ -1.03
CDC42BPB-207ENST00000560492 SLC7A13Q8TCU3 470 aa8.6□□□□□ -1.03
CDC42BPB-207ENST00000560492 FAM162AQ96A26 154 aa8.6□□□□□ -1.03
CDC42BPB-207ENST00000560492 SSX3Q99909 188 aa8.6□□□□□ -1.03
CDC42BPB-207ENST00000560492 COPS4Q9BT78 406 aa8.6□□□□□ -1.03
CDC42BPB-207ENST00000560492 IFT27Q9BW83 186 aa8.6□□□□□ -1.03
CDC42BPB-207ENST00000560492 FAM234AQ9H0X4 552 aa8.6□□□□□ -1.03
CDC42BPB-207ENST00000560492 MYLK2Q9H1R3 596 aa8.6□□□□□ -1.03
CDC42BPB-207ENST00000560492 NECAP2Q9NVZ3 263 aa8.6□□□□□ -1.03
CDC42BPB-207ENST00000560492 MRPL15Q9P015 296 aaKnown RBP8.6□□□□□ -1.03
CDC42BPB-207ENST00000560492 ACOT8O14734 319 aa8.59□□□□□ -1.03
CDC42BPB-207ENST00000560492 ANGPTL7O43827 346 aa8.59□□□□□ -1.03
CDC42BPB-207ENST00000560492 PTP4A3O75365 173 aa8.59□□□□□ -1.03
CDC42BPB-207ENST00000560492 PEX14O75381 377 aa8.59□□□□□ -1.03
CDC42BPB-207ENST00000560492 FBXO24O75426 580 aa8.59□□□□□ -1.03
CDC42BPB-207ENST00000560492 FCN3O75636 299 aa8.59□□□□□ -1.03
CDC42BPB-207ENST00000560492 SLC2A1P11166 492 aa8.59□□□□□ -1.03
CDC42BPB-207ENST00000560492 MUC1P15941 1255 aaPredicted RBP8.59□□□□□ -1.03
CDC42BPB-207ENST00000560492 HIST1H1CP16403 213 aaKnown RBP8.59□□□□□ -1.03
CDC42BPB-207ENST00000560492 NDUFB7P17568 137 aa8.59□□□□□ -1.03
CDC42BPB-207ENST00000560492 SLC6A6P31641 620 aa8.59□□□□□ -1.03
CDC42BPB-207ENST00000560492 NAA10P41227 235 aaPredicted RBP8.59□□□□□ -1.03
CDC42BPB-207ENST00000560492 RPS27P42677 84 aaKnown RBP8.59□□□□□ -1.03
CDC42BPB-207ENST00000560492 CSNK2BP67870 215 aa8.59□□□□□ -1.03
CDC42BPB-207ENST00000560492 KLF10Q13118 480 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms