RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 PAPOLGQ9BWT3 736 aaKnown RBP6.79□□□□□ -1.32
LRRC28-219ENST00000560483 VCXQ9H320 206 aa6.79□□□□□ -1.32
LRRC28-219ENST00000560483 UFSP2Q9NUQ7 469 aa6.79□□□□□ -1.32
LRRC28-219ENST00000560483 CLN6Q9NWW5 311 aa6.79□□□□□ -1.32
LRRC28-219ENST00000560483 USE1Q9NZ43 259 aa6.79□□□□□ -1.32
LRRC28-219ENST00000560483 WARS2Q9UGM6 360 aaKnown RBP6.79□□□□□ -1.32
LRRC28-219ENST00000560483 KCNS2Q9ULS6 477 aa6.79□□□□□ -1.32
LRRC28-219ENST00000560483 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.79□□□□□ -1.32
LRRC28-219ENST00000560483 KLHDC2Q9Y2U9 406 aa6.79□□□□□ -1.32
LRRC28-219ENST00000560483 LRP12Q9Y561 859 aa6.79□□□□□ -1.32
LRRC28-219ENST00000560483 CACNG2Q9Y698 323 aa6.79□□□□□ -1.32
LRRC28-219ENST00000560483 CCDC182A6NF36 153 aa6.78□□□□□ -1.32
LRRC28-219ENST00000560483 ANXA2P2A6NMY6 339 aa6.78□□□□□ -1.32
LRRC28-219ENST00000560483 CD300LBA8K4G0 201 aa6.78□□□□□ -1.32
LRRC28-219ENST00000560483 IQCF6A8MYZ5 107 aa6.78□□□□□ -1.32
LRRC28-219ENST00000560483 H0YL77 283 aa6.78□□□□□ -1.32
LRRC28-219ENST00000560483 H3BSH0 61 aa6.78□□□□□ -1.32
LRRC28-219ENST00000560483 CD5LO43866 347 aa6.78□□□□□ -1.32
LRRC28-219ENST00000560483 GRPP07492 148 aa6.78□□□□□ -1.32
LRRC28-219ENST00000560483 ANPEPP15144 967 aa6.78□□□□□ -1.32
LRRC28-219ENST00000560483 HTR1FP30939 366 aa6.78□□□□□ -1.32
LRRC28-219ENST00000560483 ADMP35318 185 aa6.78□□□□□ -1.32
LRRC28-219ENST00000560483 OPRL1P41146 370 aa6.78□□□□□ -1.32
LRRC28-219ENST00000560483 PCK2Q16822 640 aa6.78□□□□□ -1.32
LRRC28-219ENST00000560483 RSPO1Q2MKA7 263 aaPredicted RBP6.78□□□□□ -1.32
LRRC28-219ENST00000560483 TMEM255AQ5JRV8 349 aa6.78□□□□□ -1.32
LRRC28-219ENST00000560483 BCL2L15Q5TBC7 163 aa6.78□□□□□ -1.32
LRRC28-219ENST00000560483 LPCAT4Q643R3 524 aa6.78□□□□□ -1.32
LRRC28-219ENST00000560483 FAM166AQ6J272 317 aa6.78□□□□□ -1.32
LRRC28-219ENST00000560483 PLEKHG7Q6ZR37 379 aa6.78□□□□□ -1.32
LRRC28-219ENST00000560483 DNM1P46Q6ZS02 220 aa6.78□□□□□ -1.32
LRRC28-219ENST00000560483 MOGAT3Q86VF5 341 aa6.78□□□□□ -1.32
LRRC28-219ENST00000560483 ZNF420Q8TAQ5 688 aaPredicted RBP6.78□□□□□ -1.32
LRRC28-219ENST00000560483 PIGCQ92535 297 aa6.78□□□□□ -1.32
LRRC28-219ENST00000560483 RAB39BQ96DA2 213 aa6.78□□□□□ -1.32
LRRC28-219ENST00000560483 RNFT2Q96EX2 444 aa6.78□□□□□ -1.32
LRRC28-219ENST00000560483 MRPL48Q96GC5 212 aaKnown RBP6.78□□□□□ -1.32
LRRC28-219ENST00000560483 FAM71F1Q96KD3 344 aaPredicted RBP6.78□□□□□ -1.32
LRRC28-219ENST00000560483 Q96MT0 163 aa6.78□□□□□ -1.32
LRRC28-219ENST00000560483 HIST1H2AAQ96QV6 131 aa6.78□□□□□ -1.32
LRRC28-219ENST00000560483 SLC29A1Q99808 456 aa6.78□□□□□ -1.32
LRRC28-219ENST00000560483 APOL4Q9BPW4 351 aa6.78□□□□□ -1.32
LRRC28-219ENST00000560483 ADI1Q9BV57 179 aa6.78□□□□□ -1.32
LRRC28-219ENST00000560483 SLC22A4Q9H015 551 aa6.78□□□□□ -1.32
LRRC28-219ENST00000560483 OPA3Q9H6K4 179 aa6.78□□□□□ -1.32
LRRC28-219ENST00000560483 NIPAL2Q9H841 368 aa6.78□□□□□ -1.32
LRRC28-219ENST00000560483 MARCH7Q9H992 704 aa6.78□□□□□ -1.32
LRRC28-219ENST00000560483 SMPD3Q9NY59 655 aaPredicted RBP6.78□□□□□ -1.32
LRRC28-219ENST00000560483 IL19Q9UHD0 177 aa6.78□□□□□ -1.32
LRRC28-219ENST00000560483 GNG8Q9UK08 70 aa6.78□□□□□ -1.32
LRRC28-219ENST00000560483 WIPI2Q9Y4P8 454 aa6.78□□□□□ -1.32
LRRC28-219ENST00000560483 HIVEP2P31629 2446 aa6.78□□□□□ -1.32
LRRC28-219ENST00000560483 TLN2Q9Y4G6 2542 aa6.78□□□□□ -1.32
LRRC28-219ENST00000560483 LOC100130705A0A1B0GUX0 176 aa6.77□□□□□ -1.33
LRRC28-219ENST00000560483 DAPL1A0PJW8 107 aa6.77□□□□□ -1.33
LRRC28-219ENST00000560483 A8MV72 311 aaPredicted RBP6.77□□□□□ -1.33
LRRC28-219ENST00000560483 LOC110117498-PIK3R3F6TDL0 507 aa6.77□□□□□ -1.33
LRRC28-219ENST00000560483 MAGEB4O15481 346 aaPredicted RBP6.77□□□□□ -1.33
LRRC28-219ENST00000560483 MPZL2O60487 215 aa6.77□□□□□ -1.33
LRRC28-219ENST00000560483 ENTPD6O75354 484 aa6.77□□□□□ -1.33
LRRC28-219ENST00000560483 ZNF205O95201 554 aa6.77□□□□□ -1.33
LRRC28-219ENST00000560483 CYB5R3P00387 301 aaPredicted RBP6.77□□□□□ -1.33
LRRC28-219ENST00000560483 OCM2P0CE71 109 aa6.77□□□□□ -1.33
LRRC28-219ENST00000560483 OCMP0CE72 109 aaPredicted RBP6.77□□□□□ -1.33
LRRC28-219ENST00000560483 ALOX5APP20292 161 aa6.77□□□□□ -1.33
LRRC28-219ENST00000560483 HNF1AP20823 631 aa6.77□□□□□ -1.33
LRRC28-219ENST00000560483 GIFP27352 417 aa6.77□□□□□ -1.33
LRRC28-219ENST00000560483 PEX2P28328 305 aa6.77□□□□□ -1.33
LRRC28-219ENST00000560483 MTNR1AP48039 350 aa6.77□□□□□ -1.33
LRRC28-219ENST00000560483 GMFBP60983 142 aa6.77□□□□□ -1.33
LRRC28-219ENST00000560483 MRPS11P82912 194 aaKnown RBP6.77□□□□□ -1.33
LRRC28-219ENST00000560483 CDK5R2Q13319 367 aa6.77□□□□□ -1.33
LRRC28-219ENST00000560483 RIN1Q13671 783 aa6.77□□□□□ -1.33
LRRC28-219ENST00000560483 OR8B8Q15620 311 aa6.77□□□□□ -1.33
LRRC28-219ENST00000560483 ZNF124Q15973 351 aa6.77□□□□□ -1.33
LRRC28-219ENST00000560483 SNCBQ16143 134 aa6.77□□□□□ -1.33
LRRC28-219ENST00000560483 AADACL4Q5VUY2 407 aa6.77□□□□□ -1.33
LRRC28-219ENST00000560483 PRAMEF6Q5VXH4 476 aa6.77□□□□□ -1.33
LRRC28-219ENST00000560483 MEDAGQ5VYS4 303 aa6.77□□□□□ -1.33
LRRC28-219ENST00000560483 Q6ZR03 302 aa6.77□□□□□ -1.33
LRRC28-219ENST00000560483 WFDC3Q8IUB2 231 aa6.77□□□□□ -1.33
LRRC28-219ENST00000560483 ZNF679Q8IYX0 411 aa6.77□□□□□ -1.33
LRRC28-219ENST00000560483 C1orf87Q8N0U7 546 aa6.77□□□□□ -1.33
LRRC28-219ENST00000560483 KLHL36Q8N4N3 616 aa6.77□□□□□ -1.33
LRRC28-219ENST00000560483 CSNK2A3Q8NEV1 391 aa6.77□□□□□ -1.33
LRRC28-219ENST00000560483 OR8B12Q8NGG6 310 aa6.77□□□□□ -1.33
LRRC28-219ENST00000560483 CLDND2Q8NHS1 167 aa6.77□□□□□ -1.33
LRRC28-219ENST00000560483 TRUB1Q8WWH5 349 aaKnown RBP6.77□□□□□ -1.33
LRRC28-219ENST00000560483 UBE2FQ969M7 185 aa6.77□□□□□ -1.33
LRRC28-219ENST00000560483 SGK3Q96BR1 496 aa6.77□□□□□ -1.33
LRRC28-219ENST00000560483 HRASLS5Q96KN8 279 aa6.77□□□□□ -1.33
LRRC28-219ENST00000560483 OR8B4Q96RC9 309 aa6.77□□□□□ -1.33
LRRC28-219ENST00000560483 MNTQ99583 582 aa6.77□□□□□ -1.33
LRRC28-219ENST00000560483 SLC30A2Q9BRI3 323 aa6.77□□□□□ -1.33
LRRC28-219ENST00000560483 BEX2Q9BXY8 128 aa6.77□□□□□ -1.33
LRRC28-219ENST00000560483 PBOV1Q9GZY1 135 aa6.77□□□□□ -1.33
LRRC28-219ENST00000560483 SHARPINQ9H0F6 387 aa6.77□□□□□ -1.33
LRRC28-219ENST00000560483 RGCCQ9H4X1 137 aa6.77□□□□□ -1.33
LRRC28-219ENST00000560483 FN3KRPQ9HA64 309 aa6.77□□□□□ -1.33
LRRC28-219ENST00000560483 PLEKHA1Q9HB21 404 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms