RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 SPSB4Q96A44 273 aa8.97□□□□□ -0.97
TPM1-221ENST00000559831 ADAT3Q96EY9 351 aaPredicted RBP8.97□□□□□ -0.97
TPM1-221ENST00000559831 DERL3Q96Q80 235 aa8.97□□□□□ -0.97
TPM1-221ENST00000559831 REPIN1Q9BWE0 567 aaKnown RBP8.97□□□□□ -0.97
TPM1-221ENST00000559831 RBM38Q9H0Z9 239 aaKnown RBP8.97□□□□□ -0.97
TPM1-221ENST00000559831 ZNF275Q9NSD4 429 aaPredicted RBP8.97□□□□□ -0.97
TPM1-221ENST00000559831 TAS2R4Q9NYW5 299 aa8.97□□□□□ -0.97
TPM1-221ENST00000559831 RSL24D1Q9UHA3 163 aaKnown RBP8.97□□□□□ -0.97
TPM1-221ENST00000559831 GSTK1Q9Y2Q3 226 aa8.97□□□□□ -0.97
TPM1-221ENST00000559831 RNF115Q9Y4L5 304 aa8.97□□□□□ -0.97
TPM1-221ENST00000559831 V9GYS6 101 aa8.97□□□□□ -0.97
TPM1-221ENST00000559831 ANKHD1Q8IWZ3 2542 aaKnown RBP8.97□□□□□ -0.97
TPM1-221ENST00000559831 PLCE1Q9P212 2302 aa8.96□□□□□ -0.97
TPM1-221ENST00000559831 TRBV5-7A0A0A0MS05 114 aa8.96□□□□□ -0.98
TPM1-221ENST00000559831 LOC390937A0A1W2PQ73 354 aa8.96□□□□□ -0.98
TPM1-221ENST00000559831 CD300LBA8K4G0 201 aa8.96□□□□□ -0.98
TPM1-221ENST00000559831 SHISA9B4DS77 424 aa8.96□□□□□ -0.98
TPM1-221ENST00000559831 H3BMQ9 156 aa8.96□□□□□ -0.98
TPM1-221ENST00000559831 PIN1P1O15428 100 aa8.96□□□□□ -0.98
TPM1-221ENST00000559831 TIMM8AO60220 97 aaPredicted RBP8.96□□□□□ -0.98
TPM1-221ENST00000559831 SC5DO75845 299 aa8.96□□□□□ -0.98
TPM1-221ENST00000559831 ARL6IP5O75915 188 aa8.96□□□□□ -0.98
TPM1-221ENST00000559831 PLAUP00749 431 aa8.96□□□□□ -0.98
TPM1-221ENST00000559831 RAC2P15153 192 aa8.96□□□□□ -0.98
TPM1-221ENST00000559831 IGFBP2P18065 325 aa8.96□□□□□ -0.98
TPM1-221ENST00000559831 GALP22466 123 aa8.96□□□□□ -0.98
TPM1-221ENST00000559831 MYL9P24844 172 aa8.96□□□□□ -0.98
TPM1-221ENST00000559831 ACKR3P25106 362 aa8.96□□□□□ -0.98
TPM1-221ENST00000559831 GLRXP35754 106 aa8.96□□□□□ -0.98
TPM1-221ENST00000559831 SERPINB10P48595 397 aa8.96□□□□□ -0.98
TPM1-221ENST00000559831 NKX6-1P78426 367 aaPredicted RBP8.96□□□□□ -0.98
TPM1-221ENST00000559831 OR8B8Q15620 311 aa8.96□□□□□ -0.98
TPM1-221ENST00000559831 CTF1Q16619 201 aa8.96□□□□□ -0.98
TPM1-221ENST00000559831 FOXB2Q5VYV0 432 aa8.96□□□□□ -0.98
TPM1-221ENST00000559831 FBXW12Q6X9E4 464 aa8.96□□□□□ -0.98
TPM1-221ENST00000559831 GDPGP1Q6ZNW5 385 aa8.96□□□□□ -0.98
TPM1-221ENST00000559831 C1orf174Q8IYL3 243 aa8.96□□□□□ -0.98
TPM1-221ENST00000559831 BHLHE23Q8NDY6 225 aa8.96□□□□□ -0.98
TPM1-221ENST00000559831 NUP37Q8NFH4 326 aa8.96□□□□□ -0.98
TPM1-221ENST00000559831 ZNF420Q8TAQ5 688 aaPredicted RBP8.96□□□□□ -0.98
TPM1-221ENST00000559831 KLF14Q8TD94 323 aaPredicted RBP8.96□□□□□ -0.98
TPM1-221ENST00000559831 THRSPQ92748 146 aa8.96□□□□□ -0.98
TPM1-221ENST00000559831 NEUROG1Q92886 237 aa8.96□□□□□ -0.98
TPM1-221ENST00000559831 C12orf43Q96C57 262 aaKnown RBP8.96□□□□□ -0.98
TPM1-221ENST00000559831 MARS2Q96GW9 593 aaKnown RBP8.96□□□□□ -0.98
TPM1-221ENST00000559831 KCTD7Q96MP8 289 aa8.96□□□□□ -0.98
TPM1-221ENST00000559831 HS3ST6Q96QI5 342 aa8.96□□□□□ -0.98
TPM1-221ENST00000559831 PPIL3Q9H2H8 161 aaKnown RBP8.96□□□□□ -0.98
TPM1-221ENST00000559831 GPR173Q9NS66 373 aa8.96□□□□□ -0.98
TPM1-221ENST00000559831 DUSP13Q9UII6 198 aa8.96□□□□□ -0.98
TPM1-221ENST00000559831 MYO18BQ8IUG5 2567 aa8.96□□□□□ -0.98
TPM1-221ENST00000559831 ICE1Q9Y2F5 2266 aa8.96□□□□□ -0.98
TPM1-221ENST00000559831 ZNF816-ZNF321PA0A0X1KG74 233 aa8.95□□□□□ -0.98
TPM1-221ENST00000559831 SMIM30A4D0T7 59 aa8.95□□□□□ -0.98
TPM1-221ENST00000559831 CLEC18AA5D8T8 446 aa8.95□□□□□ -0.98
TPM1-221ENST00000559831 CDRT1O95170 752 aa8.95□□□□□ -0.98
TPM1-221ENST00000559831 CLDN1O95832 211 aa8.95□□□□□ -0.98
TPM1-221ENST00000559831 MAS1P04201 325 aa8.95□□□□□ -0.98
TPM1-221ENST00000559831 UCHL1P09936 223 aa8.95□□□□□ -0.98
TPM1-221ENST00000559831 SELEP16581 610 aa8.95□□□□□ -0.98
TPM1-221ENST00000559831 TUBG1P23258 451 aa8.95□□□□□ -0.98
TPM1-221ENST00000559831 LOXP28300 417 aaPredicted RBP8.95□□□□□ -0.98
TPM1-221ENST00000559831 FGF9P31371 208 aaPredicted RBP8.95□□□□□ -0.98
TPM1-221ENST00000559831 MXD1Q05195 221 aa8.95□□□□□ -0.98
TPM1-221ENST00000559831 PSG7Q13046 419 aa8.95□□□□□ -0.98
TPM1-221ENST00000559831 TNK1Q13470 666 aa8.95□□□□□ -0.98
TPM1-221ENST00000559831 MSMPQ1L6U9 139 aa8.95□□□□□ -0.98
TPM1-221ENST00000559831 ALKBH6Q3KRA9 238 aa8.95□□□□□ -0.98
TPM1-221ENST00000559831 MBNL2Q5VZF2 373 aaKnown RBP8.95□□□□□ -0.98
TPM1-221ENST00000559831 CLEC18BQ6UXF7 455 aa8.95□□□□□ -0.98
TPM1-221ENST00000559831 Q6ZSR3 168 aa8.95□□□□□ -0.98
TPM1-221ENST00000559831 LRP11Q86VZ4 500 aa8.95□□□□□ -0.98
TPM1-221ENST00000559831 SERPINA12Q8IW75 414 aa8.95□□□□□ -0.98
TPM1-221ENST00000559831 CLEC18CQ8NCF0 446 aa8.95□□□□□ -0.98
TPM1-221ENST00000559831 CSNK2A3Q8NEV1 391 aa8.95□□□□□ -0.98
TPM1-221ENST00000559831 OR13C9Q8NGT0 318 aa8.95□□□□□ -0.98
TPM1-221ENST00000559831 NDNFQ8TB73 568 aa8.95□□□□□ -0.98
TPM1-221ENST00000559831 SYNPRQ8TBG9 265 aa8.95□□□□□ -0.98
TPM1-221ENST00000559831 TMEM171Q8WVE6 324 aa8.95□□□□□ -0.98
TPM1-221ENST00000559831 PIGCQ92535 297 aa8.95□□□□□ -0.98
TPM1-221ENST00000559831 PHYHIPQ92561 330 aa8.95□□□□□ -0.98
TPM1-221ENST00000559831 HAVCR1Q96D42 359 aa8.95□□□□□ -0.98
TPM1-221ENST00000559831 BCL7BQ9BQE9 202 aa8.95□□□□□ -0.98
TPM1-221ENST00000559831 SYT3Q9BQG1 590 aa8.95□□□□□ -0.98
TPM1-221ENST00000559831 PAPOLGQ9BWT3 736 aaKnown RBP8.95□□□□□ -0.98
TPM1-221ENST00000559831 FAM192AQ9GZU8 254 aa8.95□□□□□ -0.98
TPM1-221ENST00000559831 SLITRK2Q9H156 845 aa8.95□□□□□ -0.98
TPM1-221ENST00000559831 TCF7L1Q9HCS4 588 aa8.95□□□□□ -0.98
TPM1-221ENST00000559831 TUBG2Q9NRH3 451 aa8.95□□□□□ -0.98
TPM1-221ENST00000559831 CA10Q9NS85 328 aa8.95□□□□□ -0.98
TPM1-221ENST00000559831 CKLFQ9UBR5 152 aa8.95□□□□□ -0.98
TPM1-221ENST00000559831 PURGQ9UJV8 347 aaKnown RBP8.95□□□□□ -0.98
TPM1-221ENST00000559831 CMAHPQ9Y471 501 aa8.95□□□□□ -0.98
TPM1-221ENST00000559831 DOPEY1Q5JWR5 2465 aa8.94□□□□□ -0.98
TPM1-221ENST00000559831 TRAV8-7A0A075B6U6 113 aa8.94□□□□□ -0.98
TPM1-221ENST00000559831 A0A1W2PPW3 197 aa8.94□□□□□ -0.98
TPM1-221ENST00000559831 DHRS7CA6NNS2 312 aa8.94□□□□□ -0.98
TPM1-221ENST00000559831 ANKRD30BLA7E2S9 258 aa8.94□□□□□ -0.98
TPM1-221ENST00000559831 ZNF850A8MQ14 1090 aa8.94□□□□□ -0.98
TPM1-221ENST00000559831 E7EQL1 145 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms