RNA–Protein interactions for RNA: ENST00000559718.1

USP3-214, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-214ENST00000559718 PCK2Q16822 640 aa9.62□□□□□ -0.87
USP3-214ENST00000559718 CD276Q5ZPR3 534 aa9.62□□□□□ -0.87
USP3-214ENST00000559718 RPL13AP3Q6NVV1 102 aa9.62□□□□□ -0.87
USP3-214ENST00000559718 DUX4L9Q6RFH8 374 aaPredicted RBP9.62□□□□□ -0.87
USP3-214ENST00000559718 RASSF6Q6ZTQ3 369 aa9.62□□□□□ -0.87
USP3-214ENST00000559718 BTN2A1Q7KYR7 527 aa9.62□□□□□ -0.87
USP3-214ENST00000559718 WDR86Q86TI4 376 aa9.62□□□□□ -0.87
USP3-214ENST00000559718 C11orf53Q8IXP5 236 aa9.62□□□□□ -0.87
USP3-214ENST00000559718 PDZD9Q8IXQ8 264 aa9.62□□□□□ -0.87
USP3-214ENST00000559718 DEFB107AQ8IZN7 70 aa9.62□□□□□ -0.87
USP3-214ENST00000559718 AQP11Q8NBQ7 271 aa9.62□□□□□ -0.87
USP3-214ENST00000559718 PLPP7Q8NBV4 271 aa9.62□□□□□ -0.87
USP3-214ENST00000559718 WFDC12Q8WWY7 111 aa9.62□□□□□ -0.87
USP3-214ENST00000559718 LHX4Q969G2 390 aa9.62□□□□□ -0.87
USP3-214ENST00000559718 WDFY2Q96P53 400 aa9.62□□□□□ -0.87
USP3-214ENST00000559718 KCNJ15Q99712 375 aa9.62□□□□□ -0.87
USP3-214ENST00000559718 TSSK6Q9BXA6 273 aa9.62□□□□□ -0.87
USP3-214ENST00000559718 SIRPDQ9H106 197 aa9.62□□□□□ -0.87
USP3-214ENST00000559718 NOX4Q9NPH5 578 aa9.62□□□□□ -0.87
USP3-214ENST00000559718 TBC1D23Q9NUY8 699 aa9.62□□□□□ -0.87
USP3-214ENST00000559718 ARMC1Q9NVT9 282 aa9.62□□□□□ -0.87
USP3-214ENST00000559718 VNN3Q9NY84 501 aa9.62□□□□□ -0.87
USP3-214ENST00000559718 PDP1Q9P0J1 537 aaPredicted RBP9.62□□□□□ -0.87
USP3-214ENST00000559718 DUX4Q9UBX2 424 aa9.62□□□□□ -0.87
USP3-214ENST00000559718 TAGLN3Q9UI15 199 aa9.62□□□□□ -0.87
USP3-214ENST00000559718 WNK1Q9H4A3 2382 aa9.61□□□□□ -0.87
USP3-214ENST00000559718 IGHV1-69DA0A0B4J2H0 117 aa9.61□□□□□ -0.87
USP3-214ENST00000559718 DHRS12A0PJE2 317 aa9.61□□□□□ -0.87
USP3-214ENST00000559718 TBX1O43435 398 aa9.61□□□□□ -0.87
USP3-214ENST00000559718 KRT36O76013 467 aa9.61□□□□□ -0.87
USP3-214ENST00000559718 CCNB2O95067 398 aa9.61□□□□□ -0.87
USP3-214ENST00000559718 LHBP01229 141 aa9.61□□□□□ -0.87
USP3-214ENST00000559718 IGHV1-69P01742 117 aa9.61□□□□□ -0.87
USP3-214ENST00000559718 CRYBA1P05813 215 aa9.61□□□□□ -0.87
USP3-214ENST00000559718 LIPFP07098 398 aa9.61□□□□□ -0.87
USP3-214ENST00000559718 SPI1P17947 270 aa9.61□□□□□ -0.87
USP3-214ENST00000559718 FMO3P31513 532 aa9.61□□□□□ -0.87
USP3-214ENST00000559718 BPIFB3P59826 476 aa9.61□□□□□ -0.87
USP3-214ENST00000559718 KRTAP10-3P60369 221 aa9.61□□□□□ -0.87
USP3-214ENST00000559718 CSNK2BP67870 215 aa9.61□□□□□ -0.87
USP3-214ENST00000559718 PRB3Q04118 309 aaPredicted RBP9.61□□□□□ -0.87
USP3-214ENST00000559718 METTL11BQ5VVY1 283 aa9.61□□□□□ -0.87
USP3-214ENST00000559718 PNLDC1Q8NA58 520 aaKnown RBP9.61□□□□□ -0.87
USP3-214ENST00000559718 SPERTQ8NA61 448 aa9.61□□□□□ -0.87
USP3-214ENST00000559718 OR6K6Q8NGW6 343 aa9.61□□□□□ -0.87
USP3-214ENST00000559718 OR4F5Q8NH21 305 aa9.61□□□□□ -0.87
USP3-214ENST00000559718 GATAD2BQ8WXI9 593 aa9.61□□□□□ -0.87
USP3-214ENST00000559718 SPSB4Q96A44 273 aa9.61□□□□□ -0.87
USP3-214ENST00000559718 SEH1LQ96EE3 360 aa9.61□□□□□ -0.87
USP3-214ENST00000559718 NMNAT2Q9BZQ4 307 aa9.61□□□□□ -0.87
USP3-214ENST00000559718 TRIM15Q9C019 465 aa9.61□□□□□ -0.87
USP3-214ENST00000559718 ACOXLQ9NUZ1 547 aa9.61□□□□□ -0.87
USP3-214ENST00000559718 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.6□□□□□ -0.87
USP3-214ENST00000559718 A0A0U1RQK1 487 aa9.6□□□□□ -0.87
USP3-214ENST00000559718 TCRBV5S2A0A599 114 aa9.6□□□□□ -0.87
USP3-214ENST00000559718 ZNF878C9JN71 531 aa9.6□□□□□ -0.87
USP3-214ENST00000559718 XRCC2O43543 280 aa9.6□□□□□ -0.87
USP3-214ENST00000559718 NDUFA2O43678 99 aa9.6□□□□□ -0.87
USP3-214ENST00000559718 IGHV4-59P01825 116 aa9.6□□□□□ -0.87
USP3-214ENST00000559718 ANXA2P07355 339 aaKnown RBP9.6□□□□□ -0.87
USP3-214ENST00000559718 MAGEA2P43356 314 aa9.6□□□□□ -0.87
USP3-214ENST00000559718 CX3CR1P49238 355 aa9.6□□□□□ -0.87
USP3-214ENST00000559718 SLC25A1P53007 311 aa9.6□□□□□ -0.87
USP3-214ENST00000559718 FAM3AP98173 230 aa9.6□□□□□ -0.87
USP3-214ENST00000559718 EIF2B1Q14232 305 aaKnown RBP9.6□□□□□ -0.87
USP3-214ENST00000559718 KLHL12Q53G59 568 aa9.6□□□□□ -0.87
USP3-214ENST00000559718 TEX30Q5JUR7 227 aa9.6□□□□□ -0.87
USP3-214ENST00000559718 LINC01590Q5TEZ4 76 aa9.6□□□□□ -0.87
USP3-214ENST00000559718 TEX36Q5VZQ5 186 aa9.6□□□□□ -0.87
USP3-214ENST00000559718 OLFML2AQ68BL7 652 aa9.6□□□□□ -0.87
USP3-214ENST00000559718 SLC16A9Q7RTY1 509 aa9.6□□□□□ -0.87
USP3-214ENST00000559718 PRSS45Q7RTY3 260 aa9.6□□□□□ -0.87
USP3-214ENST00000559718 CPLX4Q7Z7G2 160 aa9.6□□□□□ -0.87
USP3-214ENST00000559718 SVOPQ8N4V2 548 aa9.6□□□□□ -0.87
USP3-214ENST00000559718 OR8S1Q8NH09 359 aa9.6□□□□□ -0.87
USP3-214ENST00000559718 LRRC29Q8WV35 223 aa9.6□□□□□ -0.87
USP3-214ENST00000559718 ST8SIA4Q92187 359 aa9.6□□□□□ -0.87
USP3-214ENST00000559718 SGK3Q96BR1 496 aa9.6□□□□□ -0.87
USP3-214ENST00000559718 FAM71F1Q96KD3 344 aaPredicted RBP9.6□□□□□ -0.87
USP3-214ENST00000559718 AMELYQ99218 206 aa9.6□□□□□ -0.87
USP3-214ENST00000559718 CCL13Q99616 98 aa9.6□□□□□ -0.87
USP3-214ENST00000559718 MED20Q9H944 212 aa9.6□□□□□ -0.87
USP3-214ENST00000559718 BEX1Q9HBH7 125 aa9.6□□□□□ -0.87
USP3-214ENST00000559718 TRIM36Q9NQ86 728 aa9.6□□□□□ -0.87
USP3-214ENST00000559718 C14orf119Q9NWQ9 140 aa9.6□□□□□ -0.87
USP3-214ENST00000559718 DNAJC27Q9NZQ0 273 aa9.6□□□□□ -0.87
USP3-214ENST00000559718 KIF17Q9P2E2 1029 aa9.6□□□□□ -0.87
USP3-214ENST00000559718 ZNF319Q9P2F9 582 aa9.6□□□□□ -0.87
USP3-214ENST00000559718 RPUSD1Q9UJJ7 312 aaKnown RBP9.6□□□□□ -0.87
USP3-214ENST00000559718 U3KQV3 271 aa9.6□□□□□ -0.87
USP3-214ENST00000559718 hCG_38984A0A1B0GV85 526 aa9.59□□□□□ -0.87
USP3-214ENST00000559718 FAM183AA6NL82 134 aa9.59□□□□□ -0.87
USP3-214ENST00000559718 ANKRD30BLA7E2S9 258 aa9.59□□□□□ -0.87
USP3-214ENST00000559718 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.59□□□□□ -0.87
USP3-214ENST00000559718 NDUFA7O95182 113 aa9.59□□□□□ -0.87
USP3-214ENST00000559718 AMY2BP19961 511 aa9.59□□□□□ -0.87
USP3-214ENST00000559718 GYS2P54840 703 aa9.59□□□□□ -0.87
USP3-214ENST00000559718 DLX1P56177 255 aa9.59□□□□□ -0.87
USP3-214ENST00000559718 ZNF121P58317 390 aaPredicted RBP9.59□□□□□ -0.87
USP3-214ENST00000559718 GRB2P62993 217 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms