RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 OR10G6Q8NH81 332 aa1.51□□□□□ -2.17
VPS13C-207ENST00000558919 OR51E1Q8TCB6 317 aa1.51□□□□□ -2.17
VPS13C-207ENST00000558919 GLYATL2Q8WU03 294 aa1.51□□□□□ -2.17
VPS13C-207ENST00000558919 NRBF2Q96F24 287 aa1.51□□□□□ -2.17
VPS13C-207ENST00000558919 C9orf72Q96LT7 481 aa1.51□□□□□ -2.17
VPS13C-207ENST00000558919 SAMD10Q9BYL1 202 aa1.51□□□□□ -2.17
VPS13C-207ENST00000558919 IQCGQ9H095 443 aaKnown RBP1.51□□□□□ -2.17
VPS13C-207ENST00000558919 MRM3Q9HC36 420 aaKnown RBP1.51□□□□□ -2.17
VPS13C-207ENST00000558919 CRLF2Q9HC73 371 aa1.51□□□□□ -2.17
VPS13C-207ENST00000558919 MED4Q9NPJ6 270 aa1.51□□□□□ -2.17
VPS13C-207ENST00000558919 AGPAT4Q9NRZ5 378 aa1.51□□□□□ -2.17
VPS13C-207ENST00000558919 PDP1Q9P0J1 537 aaPredicted RBP1.51□□□□□ -2.17
VPS13C-207ENST00000558919 MTFP1Q9UDX5 166 aa1.51□□□□□ -2.17
VPS13C-207ENST00000558919 RCL1Q9Y2P8 373 aaKnown RBP1.51□□□□□ -2.17
VPS13C-207ENST00000558919 ZNF407Q9C0G0 2248 aa1.51□□□□□ -2.17
VPS13C-207ENST00000558919 IGHV3OR16-9A0A0B4J2B5 98 aa1.5□□□□□ -2.17
VPS13C-207ENST00000558919 A0A0J9YXV3 536 aa1.5□□□□□ -2.17
VPS13C-207ENST00000558919 A0A1W2PRD5 423 aa1.5□□□□□ -2.17
VPS13C-207ENST00000558919 TSPAN11A1L157 253 aa1.5□□□□□ -2.17
VPS13C-207ENST00000558919 GABRR3A8MPY1 467 aa1.5□□□□□ -2.17
VPS13C-207ENST00000558919 SUPT3HB4E1H0 165 aa1.5□□□□□ -2.17
VPS13C-207ENST00000558919 TEX46H3BTG2 121 aa1.5□□□□□ -2.17
VPS13C-207ENST00000558919 BCKDKO14874 412 aa1.5□□□□□ -2.17
VPS13C-207ENST00000558919 NVLO15381 856 aaKnown RBP1.5□□□□□ -2.17
VPS13C-207ENST00000558919 PLIN3O60664 434 aa1.5□□□□□ -2.17
VPS13C-207ENST00000558919 IFNW1P05000 195 aa1.5□□□□□ -2.17
VPS13C-207ENST00000558919 UBCP0CG48 685 aaKnown RBP1.5□□□□□ -2.17
VPS13C-207ENST00000558919 STAG3L3P0CL85 134 aa1.5□□□□□ -2.17
VPS13C-207ENST00000558919 CD37P11049 281 aa1.5□□□□□ -2.17
VPS13C-207ENST00000558919 RALBP11234 206 aa1.5□□□□□ -2.17
VPS13C-207ENST00000558919 GZMAP12544 262 aa1.5□□□□□ -2.17
VPS13C-207ENST00000558919 CSNK2A2P19784 350 aaPredicted RBP1.5□□□□□ -2.17
VPS13C-207ENST00000558919 IL32P24001 234 aa1.5□□□□□ -2.17
VPS13C-207ENST00000558919 PFN2P35080 140 aa1.5□□□□□ -2.17
VPS13C-207ENST00000558919 MPV17P39210 176 aa1.5□□□□□ -2.17
VPS13C-207ENST00000558919 IDH2P48735 452 aaKnown RBP1.5□□□□□ -2.17
VPS13C-207ENST00000558919 RPS23P62266 143 aaKnown RBP1.5□□□□□ -2.17
VPS13C-207ENST00000558919 PRKCDQ05655 676 aa1.5□□□□□ -2.17
VPS13C-207ENST00000558919 SPAG1Q07617 926 aa1.5□□□□□ -2.17
VPS13C-207ENST00000558919 ART3Q13508 389 aa1.5□□□□□ -2.17
VPS13C-207ENST00000558919 TRMT5Q32P41 509 aaKnown RBP1.5□□□□□ -2.17
VPS13C-207ENST00000558919 HCP5Q6MZN7 132 aa1.5□□□□□ -2.17
VPS13C-207ENST00000558919 C12orf54Q6X4T0 127 aa1.5□□□□□ -2.17
VPS13C-207ENST00000558919 TMCO2Q7Z6W1 182 aaPredicted RBP1.5□□□□□ -2.17
VPS13C-207ENST00000558919 HORMAD1Q86X24 394 aa1.5□□□□□ -2.17
VPS13C-207ENST00000558919 CSGALNACT2Q8N6G5 542 aa1.5□□□□□ -2.17
VPS13C-207ENST00000558919 OR5T1Q8NG75 326 aa1.5□□□□□ -2.17
VPS13C-207ENST00000558919 PEX13Q92968 403 aa1.5□□□□□ -2.17
VPS13C-207ENST00000558919 RPEQ96AT9 228 aa1.5□□□□□ -2.17
VPS13C-207ENST00000558919 BTN2A3PQ96KV6 586 aa1.5□□□□□ -2.17
VPS13C-207ENST00000558919 C1orf50Q9BV19 199 aa1.5□□□□□ -2.17
VPS13C-207ENST00000558919 CALN1Q9BXU9 219 aa1.5□□□□□ -2.17
VPS13C-207ENST00000558919 PIGUQ9H490 435 aa1.5□□□□□ -2.17
VPS13C-207ENST00000558919 CLSTN2Q9H4D0 955 aa1.5□□□□□ -2.17
VPS13C-207ENST00000558919 BEX1Q9HBH7 125 aa1.5□□□□□ -2.17
VPS13C-207ENST00000558919 ACP6Q9NPH0 428 aa1.5□□□□□ -2.17
VPS13C-207ENST00000558919 RPRD1BQ9NQG5 326 aaKnown RBP1.5□□□□□ -2.17
VPS13C-207ENST00000558919 SLC39A1Q9NY26 324 aa1.5□□□□□ -2.17
VPS13C-207ENST00000558919 MYEF2Q9P2K5 600 aaKnown RBP1.5□□□□□ -2.17
VPS13C-207ENST00000558919 BAZ2AQ9UIF9 1905 aaKnown RBP1.5□□□□□ -2.17
VPS13C-207ENST00000558919 PLEKHG2Q9H7P9 1386 aa1.49□□□□□ -2.17
VPS13C-207ENST00000558919 PHLPP2Q6ZVD8 1323 aa1.49□□□□□ -2.17
VPS13C-207ENST00000558919 ARPC4-TTLL3A0A0A6YYG9 625 aa1.49□□□□□ -2.17
VPS13C-207ENST00000558919 A0A1B0GTQ1 180 aa1.49□□□□□ -2.17
VPS13C-207ENST00000558919 A0A1B0GUH1 482 aa1.49□□□□□ -2.17
VPS13C-207ENST00000558919 GOLGA6L7A0A1B0GV03 622 aa1.49□□□□□ -2.17
VPS13C-207ENST00000558919 OR6C70A6NIJ9 312 aa1.49□□□□□ -2.17
VPS13C-207ENST00000558919 SYCE1LA8MT33 242 aa1.49□□□□□ -2.17
VPS13C-207ENST00000558919 H7C1H1 209 aa1.49□□□□□ -2.17
VPS13C-207ENST00000558919 MANBAO00462 879 aa1.49□□□□□ -2.17
VPS13C-207ENST00000558919 NME4O00746 187 aa1.49□□□□□ -2.17
VPS13C-207ENST00000558919 ERI3O43414 337 aaKnown RBP1.49□□□□□ -2.17
VPS13C-207ENST00000558919 TACSTD2P09758 323 aa1.49□□□□□ -2.17
VPS13C-207ENST00000558919 USF1P22415 310 aaPredicted RBP1.49□□□□□ -2.17
VPS13C-207ENST00000558919 RFC3P40938 356 aa1.49□□□□□ -2.17
VPS13C-207ENST00000558919 NBL1P41271 181 aa1.49□□□□□ -2.17
VPS13C-207ENST00000558919 SLC1A2P43004 574 aa1.49□□□□□ -2.17
VPS13C-207ENST00000558919 FABP6P51161 128 aa1.49□□□□□ -2.17
VPS13C-207ENST00000558919 CLDN8P56748 225 aa1.49□□□□□ -2.17
VPS13C-207ENST00000558919 UBE2MP61081 183 aaKnown RBP1.49□□□□□ -2.17
VPS13C-207ENST00000558919 IRF8Q02556 426 aa1.49□□□□□ -2.17
VPS13C-207ENST00000558919 PPIDQ08752 370 aaKnown RBP1.49□□□□□ -2.17
VPS13C-207ENST00000558919 SIGLEC14Q08ET2 396 aa1.49□□□□□ -2.17
VPS13C-207ENST00000558919 FAM53BQ14153 422 aa1.49□□□□□ -2.17
VPS13C-207ENST00000558919 HADHQ16836 314 aaKnown RBP1.49□□□□□ -2.17
VPS13C-207ENST00000558919 CAVIN4Q5BKX8 364 aa1.49□□□□□ -2.17
VPS13C-207ENST00000558919 PIP5KL1Q5T9C9 394 aa1.49□□□□□ -2.17
VPS13C-207ENST00000558919 PLCXD3Q63HM9 321 aa1.49□□□□□ -2.17
VPS13C-207ENST00000558919 TTC19Q6DKK2 380 aaPredicted RBP1.49□□□□□ -2.17
VPS13C-207ENST00000558919 WDR82Q6UXN9 313 aa1.49□□□□□ -2.17
VPS13C-207ENST00000558919 NT5DC3Q86UY8 548 aa1.49□□□□□ -2.17
VPS13C-207ENST00000558919 SNX31Q8N9S9 440 aa1.49□□□□□ -2.17
VPS13C-207ENST00000558919 OR4M1Q8NGD0 313 aa1.49□□□□□ -2.17
VPS13C-207ENST00000558919 GPX8Q8TED1 209 aa1.49□□□□□ -2.17
VPS13C-207ENST00000558919 CFAP53Q96M91 514 aa1.49□□□□□ -2.17
VPS13C-207ENST00000558919 RNF145Q96MT1 663 aa1.49□□□□□ -2.17
VPS13C-207ENST00000558919 GPR21Q99679 349 aa1.49□□□□□ -2.17
VPS13C-207ENST00000558919 FANCEQ9HB96 536 aa1.49□□□□□ -2.17
VPS13C-207ENST00000558919 TMEM27Q9HBJ8 222 aa1.49□□□□□ -2.17
VPS13C-207ENST00000558919 MYOZ1Q9NP98 299 aaPredicted RBP1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms