RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 SHFQ7M4L6 423 aa9.94□□□□□ -0.82
HERC1-202ENST00000558324 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.94□□□□□ -0.82
HERC1-202ENST00000558324 CPOQ8IVL8 374 aa9.94□□□□□ -0.82
HERC1-202ENST00000558324 PARP8Q8N3A8 854 aa9.94□□□□□ -0.82
HERC1-202ENST00000558324 BBS1Q8NFJ9 593 aa9.94□□□□□ -0.82
HERC1-202ENST00000558324 THEM6Q8WUY1 208 aa9.94□□□□□ -0.82
HERC1-202ENST00000558324 RAB40AQ8WXH6 277 aa9.94□□□□□ -0.82
HERC1-202ENST00000558324 SPSB4Q96A44 273 aa9.94□□□□□ -0.82
HERC1-202ENST00000558324 SGK3Q96BR1 496 aa9.94□□□□□ -0.82
HERC1-202ENST00000558324 NUDT16L1Q9BRJ7 211 aaKnown RBP9.94□□□□□ -0.82
HERC1-202ENST00000558324 MS4A7Q9GZW8 240 aaPredicted RBP9.94□□□□□ -0.82
HERC1-202ENST00000558324 PPP1R3EQ9H7J1 279 aa9.94□□□□□ -0.82
HERC1-202ENST00000558324 YY1AP1Q9H869 796 aa9.94□□□□□ -0.82
HERC1-202ENST00000558324 MARCH7Q9H992 704 aa9.94□□□□□ -0.82
HERC1-202ENST00000558324 NTN4Q9HB63 628 aa9.94□□□□□ -0.82
HERC1-202ENST00000558324 C14orf119Q9NWQ9 140 aa9.94□□□□□ -0.82
HERC1-202ENST00000558324 KIF17Q9P2E2 1029 aa9.94□□□□□ -0.82
HERC1-202ENST00000558324 CTSZQ9UBR2 303 aa9.94□□□□□ -0.82
HERC1-202ENST00000558324 DNAJB9Q9UBS3 223 aa9.94□□□□□ -0.82
HERC1-202ENST00000558324 KLHDC2Q9Y2U9 406 aa9.94□□□□□ -0.82
HERC1-202ENST00000558324 SOX21Q9Y651 276 aaPredicted RBP9.94□□□□□ -0.82
HERC1-202ENST00000558324 IGHV3OR15-7A0A075B7D8 119 aa9.93□□□□□ -0.82
HERC1-202ENST00000558324 hCG_38984A0A1B0GV85 526 aa9.93□□□□□ -0.82
HERC1-202ENST00000558324 TCRBV3S1A0A5B6 114 aa9.93□□□□□ -0.82
HERC1-202ENST00000558324 OOEPA6NGQ2 149 aa9.93□□□□□ -0.82
HERC1-202ENST00000558324 DNAJC9-AS1A6NH13 148 aa9.93□□□□□ -0.82
HERC1-202ENST00000558324 C22orf46C9J442 243 aa9.93□□□□□ -0.82
HERC1-202ENST00000558324 PHYHO14832 338 aa9.93□□□□□ -0.82
HERC1-202ENST00000558324 ADAM20O43506 726 aa9.93□□□□□ -0.82
HERC1-202ENST00000558324 TIPRLO75663 272 aa9.93□□□□□ -0.82
HERC1-202ENST00000558324 FSTL3O95633 263 aa9.93□□□□□ -0.82
HERC1-202ENST00000558324 PTBP3O95758 552 aaKnown RBP9.93□□□□□ -0.82
HERC1-202ENST00000558324 APOC1P02654 83 aa9.93□□□□□ -0.82
HERC1-202ENST00000558324 GYPAP02724 150 aa9.93□□□□□ -0.82
HERC1-202ENST00000558324 HMGN1P05114 100 aa9.93□□□□□ -0.82
HERC1-202ENST00000558324 LYNP07948 512 aa9.93□□□□□ -0.82
HERC1-202ENST00000558324 EGR1P18146 543 aa9.93□□□□□ -0.82
HERC1-202ENST00000558324 CPT2P23786 658 aa9.93□□□□□ -0.82
HERC1-202ENST00000558324 CFPP27918 469 aa9.93□□□□□ -0.82
HERC1-202ENST00000558324 DDOSTP39656 456 aa9.93□□□□□ -0.82
HERC1-202ENST00000558324 CDK5Q00535 292 aa9.93□□□□□ -0.82
HERC1-202ENST00000558324 PRSS45Q7RTY3 260 aa9.93□□□□□ -0.82
HERC1-202ENST00000558324 WDR86Q86TI4 376 aa9.93□□□□□ -0.82
HERC1-202ENST00000558324 SPERTQ8NA61 448 aa9.93□□□□□ -0.82
HERC1-202ENST00000558324 OR52H1Q8NGJ2 320 aa9.93□□□□□ -0.82
HERC1-202ENST00000558324 OTOSQ8NHW6 89 aa9.93□□□□□ -0.82
HERC1-202ENST00000558324 ZNF48Q96MX3 618 aaPredicted RBP9.93□□□□□ -0.82
HERC1-202ENST00000558324 PAPOLGQ9BWT3 736 aaKnown RBP9.93□□□□□ -0.82
HERC1-202ENST00000558324 OR10A2Q9H208 303 aa9.93□□□□□ -0.82
HERC1-202ENST00000558324 SP140LQ9H930 580 aa9.93□□□□□ -0.82
HERC1-202ENST00000558324 ZNF319Q9P2F9 582 aa9.93□□□□□ -0.82
HERC1-202ENST00000558324 TRAV38-1A0A0B4J264 116 aa9.92□□□□□ -0.82
HERC1-202ENST00000558324 MDFIC2A0A1B0GVS7 189 aa9.92□□□□□ -0.82
HERC1-202ENST00000558324 PRODHO43272 600 aa9.92□□□□□ -0.82
HERC1-202ENST00000558324 MRPL3P09001 348 aaKnown RBP9.92□□□□□ -0.82
HERC1-202ENST00000558324 ANXA8P13928 327 aa9.92□□□□□ -0.82
HERC1-202ENST00000558324 HOXB6P17509 224 aaKnown RBP9.92□□□□□ -0.82
HERC1-202ENST00000558324 GNALP38405 381 aa9.92□□□□□ -0.82
HERC1-202ENST00000558324 PSMB10P40306 273 aa9.92□□□□□ -0.82
HERC1-202ENST00000558324 GSK3AP49840 483 aa9.92□□□□□ -0.82
HERC1-202ENST00000558324 HCCSP53701 268 aa9.92□□□□□ -0.82
HERC1-202ENST00000558324 FGF12P61328 243 aa9.92□□□□□ -0.82
HERC1-202ENST00000558324 CSNK2BP67870 215 aa9.92□□□□□ -0.82
HERC1-202ENST00000558324 MZT1Q08AG7 82 aa9.92□□□□□ -0.82
HERC1-202ENST00000558324 BAMBIQ13145 260 aa9.92□□□□□ -0.82
HERC1-202ENST00000558324 APOFQ13790 326 aa9.92□□□□□ -0.82
HERC1-202ENST00000558324 KCNJ8Q15842 424 aa9.92□□□□□ -0.82
HERC1-202ENST00000558324 BRD3OSQ6XYD6 125 aa9.92□□□□□ -0.82
HERC1-202ENST00000558324 ZNF841Q6ZN19 808 aa9.92□□□□□ -0.82
HERC1-202ENST00000558324 DOK3Q7L591 496 aa9.92□□□□□ -0.82
HERC1-202ENST00000558324 GCSAMQ8N6F7 178 aa9.92□□□□□ -0.82
HERC1-202ENST00000558324 C3orf56Q8N813 242 aa9.92□□□□□ -0.82
HERC1-202ENST00000558324 ZNF454Q8N9F8 522 aa9.92□□□□□ -0.82
HERC1-202ENST00000558324 PLPP7Q8NBV4 271 aa9.92□□□□□ -0.82
HERC1-202ENST00000558324 LRRC29Q8WV35 223 aa9.92□□□□□ -0.82
HERC1-202ENST00000558324 DACT3Q96B18 629 aaPredicted RBP9.92□□□□□ -0.82
HERC1-202ENST00000558324 UPRTQ96BW1 309 aa9.92□□□□□ -0.82
HERC1-202ENST00000558324 TEX12Q9BXU0 123 aa9.92□□□□□ -0.82
HERC1-202ENST00000558324 TTTY10Q9BZA0 68 aa9.92□□□□□ -0.82
HERC1-202ENST00000558324 RASSF4Q9H2L5 321 aa9.92□□□□□ -0.82
HERC1-202ENST00000558324 SMURF1Q9HCE7 757 aa9.92□□□□□ -0.82
HERC1-202ENST00000558324 PAPOLBQ9NRJ5 636 aaKnown RBP9.92□□□□□ -0.82
HERC1-202ENST00000558324 FAM53CQ9NYF3 392 aa9.92□□□□□ -0.82
HERC1-202ENST00000558324 TVP23BQ9NYZ1 205 aa9.92□□□□□ -0.82
HERC1-202ENST00000558324 ERVK-18Q9QC07 812 aa9.92□□□□□ -0.82
HERC1-202ENST00000558324 RHBDD3Q9Y3P4 386 aa9.92□□□□□ -0.82
HERC1-202ENST00000558324 WNK2Q9Y3S1 2297 aa9.91□□□□□ -0.82
HERC1-202ENST00000558324 KIR2DS1A0A191URI9 304 aa9.91□□□□□ -0.82
HERC1-202ENST00000558324 TMEM89A2RUT3 159 aa9.91□□□□□ -0.82
HERC1-202ENST00000558324 M0R129 80 aa9.91□□□□□ -0.82
HERC1-202ENST00000558324 PSMD9O00233 223 aa9.91□□□□□ -0.82
HERC1-202ENST00000558324 GSC2O15499 205 aa9.91□□□□□ -0.82
HERC1-202ENST00000558324 ENSAO43768 121 aaKnown RBP9.91□□□□□ -0.82
HERC1-202ENST00000558324 SFTPBP07988 381 aa9.91□□□□□ -0.82
HERC1-202ENST00000558324 SLC2A5P22732 501 aa9.91□□□□□ -0.82
HERC1-202ENST00000558324 CFL1P23528 166 aaKnown RBP9.91□□□□□ -0.82
HERC1-202ENST00000558324 PSMA6P60900 246 aaKnown RBP9.91□□□□□ -0.82
HERC1-202ENST00000558324 GMFBP60983 142 aa9.91□□□□□ -0.82
HERC1-202ENST00000558324 ELF3P78545 371 aaPredicted RBP9.91□□□□□ -0.82
HERC1-202ENST00000558324 SNAPC1Q16533 368 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms