RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 ALDOBP05062 364 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 DCNP07585 359 aaKnown RBP2.02□□□□□ -2.09
SPG11-206ENST00000558093 GUSBP08236 651 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 GIPP09681 153 aaPredicted RBP2.02□□□□□ -2.09
SPG11-206ENST00000558093 NQO1P15559 274 aaKnown RBP2.02□□□□□ -2.09
SPG11-206ENST00000558093 RCC1P18754 421 aaPredicted RBP2.02□□□□□ -2.09
SPG11-206ENST00000558093 ELK4P28324 431 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 DDOSTP39656 456 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 RPL13AP40429 203 aaKnown RBP2.02□□□□□ -2.09
SPG11-206ENST00000558093 CSKP41240 450 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 NBL1P41271 181 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 GPR1P46091 355 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 EFNB2P52799 333 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 CRISP1P54107 249 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 TMEM33P57088 247 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 TAS2R60P59551 318 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 SELENOTP62341 195 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 PSPHP78330 225 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 CCL7P80098 99 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 FLI1Q01543 452 aaPredicted RBP2.02□□□□□ -2.09
SPG11-206ENST00000558093 TNFRSF9Q07011 255 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 RAB40BQ12829 278 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 PDIA2Q13087 525 aaKnown RBP2.02□□□□□ -2.09
SPG11-206ENST00000558093 VGLL4Q14135 290 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 MAD2L1BPQ15013 274 aaPredicted RBP2.02□□□□□ -2.09
SPG11-206ENST00000558093 SHHQ15465 462 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 RFX4Q33E94 735 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 BSXQ3C1V8 233 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 TP53I3Q53FA7 332 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 ACSM3Q53FZ2 586 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 DMRTC1Q5HYR2 192 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 TEX30Q5JUR7 227 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 C1orf220Q5T0J3 134 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 TSPO2Q5TGU0 170 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 STUMQ69YW2 141 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 ZFP2Q6ZN57 461 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 Q6ZSR3 168 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 NT5DC3Q86UY8 548 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 TMEM25Q86YD3 366 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 CALHM1Q8IU99 346 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 TRAPPC5Q8IUR0 188 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 CLDN19Q8N6F1 224 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 C15orf54Q8N8G6 183 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 C12orf29Q8N999 325 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 ZNF738Q8NE65 137 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 NOXO1Q8NFA2 376 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 OR11L1Q8NGX0 322 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 OR6N2Q8NGY6 317 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 OR2V1Q8NHB1 315 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 PIGXQ8TBF5 258 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 MAGEE2Q8TD90 523 aaPredicted RBP2.02□□□□□ -2.09
SPG11-206ENST00000558093 ZNF721Q8TF20 911 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 KCTD4Q8WVF5 259 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 NELFBQ8WX92 580 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 IFT81Q8WYA0 676 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 BORCS5Q969J3 196 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 MYLPFQ96A32 169 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 PTH2Q96A98 100 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 RPEQ96AT9 228 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 SGTBQ96EQ0 304 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 PGLYRP4Q96LB8 373 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 RASL11BQ9BPW5 248 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 ECSITQ9BQ95 431 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 SEC22CQ9BRL7 303 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 TMEM109Q9BVC6 243 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 ULBP1Q9BZM6 244 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 ING2Q9H160 280 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 NXF5Q9H1B4 397 aaKnown RBP2.02□□□□□ -2.09
SPG11-206ENST00000558093 SYT4Q9H2B2 425 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 OR51M1Q9H341 326 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 NMRAL1Q9HBL8 299 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 RETNQ9HD89 108 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 ARMC1Q9NVT9 282 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 RMND1Q9NWS8 449 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 C1orf109Q9NX04 203 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 WRAP73Q9P2S5 460 aaPredicted RBP2.02□□□□□ -2.09
SPG11-206ENST00000558093 NDRG2Q9UN36 371 aaKnown RBP2.02□□□□□ -2.09
SPG11-206ENST00000558093 YARS2Q9Y2Z4 477 aaKnown RBP2.02□□□□□ -2.09
SPG11-206ENST00000558093 PEX16Q9Y5Y5 336 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 ALG6Q9Y672 507 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 NAV1Q8NEY1 1877 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 MSH6P52701 1360 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 LTBP1Q14766 1721 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 IGLV4-69A0A075B6H9 119 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 IGLV4-60A0A075B6I1 120 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 UQCRHLA0A096LP55 91 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.01□□□□□ -2.09
SPG11-206ENST00000558093 ZNF98A6NK75 572 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 LINC00587B1AMM8 73 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 C9J4A7 227 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 ATP6V1G2-DDX39BF2Z307 99 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 F5H5T6 163 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 M0R036 132 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 DFFAO00273 331 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 PPP1R2P9O14990 202 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 SLC16A4O15374 487 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 SLC31A2O15432 143 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 ARPC5O15511 151 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 PSTPIP1O43586 416 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 DPM1O60762 260 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms