RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 COMMD4Q9H0A8 199 aa18.15■□□□□ 0.5
CASC4-204ENST00000557945 APCP25054 2843 aa18.14■□□□□ 0.49
CASC4-204ENST00000557945 LRBAP50851 2863 aa18.14■□□□□ 0.49
CASC4-204ENST00000557945 A0A1B0GTI1 187 aa18.14■□□□□ 0.49
CASC4-204ENST00000557945 LOC107986453A0A1B0GWG9 222 aa18.14■□□□□ 0.49
CASC4-204ENST00000557945 ZSCAN5BA6NJL1 495 aa18.14■□□□□ 0.49
CASC4-204ENST00000557945 OR4C45A6NMZ5 311 aa18.14■□□□□ 0.49
CASC4-204ENST00000557945 ANKRD30BLA7E2S9 258 aa18.14■□□□□ 0.49
CASC4-204ENST00000557945 C17orf100A8MU93 164 aa18.14■□□□□ 0.49
CASC4-204ENST00000557945 SYT7O43581 403 aa18.14■□□□□ 0.49
CASC4-204ENST00000557945 MRPS14O60783 128 aaKnown RBP18.14■□□□□ 0.49
CASC4-204ENST00000557945 MTRF1O75570 445 aaKnown RBP18.14■□□□□ 0.49
CASC4-204ENST00000557945 MAP2K3P46734 347 aa18.14■□□□□ 0.49
CASC4-204ENST00000557945 TAS2R43P59537 309 aa18.14■□□□□ 0.49
CASC4-204ENST00000557945 OR8B8Q15620 311 aa18.14■□□□□ 0.49
CASC4-204ENST00000557945 TMEM244Q5VVB8 128 aa18.14■□□□□ 0.49
CASC4-204ENST00000557945 DOK3Q7L591 496 aa18.14■□□□□ 0.49
CASC4-204ENST00000557945 SEMA6DQ8NFY4 1073 aa18.14■□□□□ 0.49
CASC4-204ENST00000557945 OR5AK2Q8NH90 309 aa18.14■□□□□ 0.49
CASC4-204ENST00000557945 RAB1BQ9H0U4 201 aa18.14■□□□□ 0.49
CASC4-204ENST00000557945 TMEM100Q9NV29 134 aa18.14■□□□□ 0.49
CASC4-204ENST00000557945 LSM2Q9Y333 95 aaKnown RBP18.14■□□□□ 0.49
CASC4-204ENST00000557945 SIRT4Q9Y6E7 314 aaPredicted RBP18.14■□□□□ 0.49
CASC4-204ENST00000557945 USF3Q68DE3 2245 aa18.14■□□□□ 0.49
CASC4-204ENST00000557945 ARFGEF3Q5TH69 2177 aa18.13■□□□□ 0.49
CASC4-204ENST00000557945 PNMA8CA0A1B0GUJ8 204 aa18.13■□□□□ 0.49
CASC4-204ENST00000557945 TMEM212A6NML5 194 aa18.13■□□□□ 0.49
CASC4-204ENST00000557945 H7C417 338 aa18.13■□□□□ 0.49
CASC4-204ENST00000557945 DHRS3O75911 302 aa18.13■□□□□ 0.49
CASC4-204ENST00000557945 ZFPL1O95159 310 aa18.13■□□□□ 0.49
CASC4-204ENST00000557945 TNFAIP8O95379 198 aa18.13■□□□□ 0.49
CASC4-204ENST00000557945 ERCC1P07992 297 aaPredicted RBP18.13■□□□□ 0.49
CASC4-204ENST00000557945 ACKR3P25106 362 aa18.13■□□□□ 0.49
CASC4-204ENST00000557945 SLC3A1Q07837 685 aa18.13■□□□□ 0.49
CASC4-204ENST00000557945 Q6ZR03 302 aa18.13■□□□□ 0.49
CASC4-204ENST00000557945 SVOPQ8N4V2 548 aa18.13■□□□□ 0.49
CASC4-204ENST00000557945 CSNK2A3Q8NEV1 391 aa18.13■□□□□ 0.49
CASC4-204ENST00000557945 OR2Z1Q8NG97 314 aa18.13■□□□□ 0.49
CASC4-204ENST00000557945 OR13G1Q8NGZ3 307 aa18.13■□□□□ 0.49
CASC4-204ENST00000557945 NINJ1Q92982 152 aa18.13■□□□□ 0.49
CASC4-204ENST00000557945 TRMT61AQ96FX7 289 aaKnown RBP18.13■□□□□ 0.49
CASC4-204ENST00000557945 PDCD1LG2Q9BQ51 273 aa18.13■□□□□ 0.49
CASC4-204ENST00000557945 LOC390937A0A1W2PQ73 354 aa18.12■□□□□ 0.49
CASC4-204ENST00000557945 OGG1O15527 345 aa18.12■□□□□ 0.49
CASC4-204ENST00000557945 IGHV1-46P01743 117 aa18.12■□□□□ 0.49
CASC4-204ENST00000557945 HSMCR30P0CW71 290 aa18.12■□□□□ 0.49
CASC4-204ENST00000557945 ATP6V1B1P15313 513 aa18.12■□□□□ 0.49
CASC4-204ENST00000557945 CCL1P22362 96 aa18.12■□□□□ 0.49
CASC4-204ENST00000557945 CA6P23280 308 aa18.12■□□□□ 0.49
CASC4-204ENST00000557945 RIPPLY1Q0D2K3 151 aa18.12■□□□□ 0.49
CASC4-204ENST00000557945 TNK1Q13470 666 aa18.12■□□□□ 0.49
CASC4-204ENST00000557945 DOC2BQ14184 412 aa18.12■□□□□ 0.49
CASC4-204ENST00000557945 TBCEQ15813 527 aaPredicted RBP18.12■□□□□ 0.49
CASC4-204ENST00000557945 TSTQ16762 297 aaKnown RBP18.12■□□□□ 0.49
CASC4-204ENST00000557945 DEFB113Q30KQ7 82 aa18.12■□□□□ 0.49
CASC4-204ENST00000557945 ZNF773Q6PK81 442 aa18.12■□□□□ 0.49
CASC4-204ENST00000557945 FTMTQ8N4E7 242 aa18.12■□□□□ 0.49
CASC4-204ENST00000557945 PERPQ96FX8 193 aa18.12■□□□□ 0.49
CASC4-204ENST00000557945 SLC30A2Q9BRI3 323 aa18.12■□□□□ 0.49
CASC4-204ENST00000557945 BEX4Q9NWD9 120 aaPredicted RBP18.12■□□□□ 0.49
CASC4-204ENST00000557945 MRPL15Q9P015 296 aaKnown RBP18.12■□□□□ 0.49
CASC4-204ENST00000557945 PIGLQ9Y2B2 252 aa18.12■□□□□ 0.49
CASC4-204ENST00000557945 NAV2Q8IVL1 2488 aa18.11■□□□□ 0.49
CASC4-204ENST00000557945 TPD52L2O43399 206 aaKnown RBP18.11■□□□□ 0.49
CASC4-204ENST00000557945 HLA-DPB1P04440 258 aa18.11■□□□□ 0.49
CASC4-204ENST00000557945 ISG15P05161 165 aa18.11■□□□□ 0.49
CASC4-204ENST00000557945 ACHEP22303 614 aa18.11■□□□□ 0.49
CASC4-204ENST00000557945 GNALP38405 381 aa18.11■□□□□ 0.49
CASC4-204ENST00000557945 DMKNQ6E0U4 476 aaPredicted RBP18.11■□□□□ 0.49
CASC4-204ENST00000557945 SPARTQ8N0X7 666 aa18.11■□□□□ 0.49
CASC4-204ENST00000557945 PLPP7Q8NBV4 271 aa18.11■□□□□ 0.49
CASC4-204ENST00000557945 OR14K1Q8NGZ2 314 aa18.11■□□□□ 0.49
CASC4-204ENST00000557945 SMIM19Q96E16 107 aa18.11■□□□□ 0.49
CASC4-204ENST00000557945 ELMOD3Q96FG2 381 aa18.11■□□□□ 0.49
CASC4-204ENST00000557945 SORCS2Q96PQ0 1159 aa18.11■□□□□ 0.49
CASC4-204ENST00000557945 PAPOLGQ9BWT3 736 aaKnown RBP18.11■□□□□ 0.49
CASC4-204ENST00000557945 PLEKHA1Q9HB21 404 aa18.11■□□□□ 0.49
CASC4-204ENST00000557945 ACOT13Q9NPJ3 140 aa18.11■□□□□ 0.49
CASC4-204ENST00000557945 ZNF701Q9NV72 531 aaPredicted RBP18.11■□□□□ 0.49
CASC4-204ENST00000557945 ZDHHC8Q9ULC8 765 aa18.11■□□□□ 0.49
CASC4-204ENST00000557945 HHLA2Q9UM44 414 aa18.11■□□□□ 0.49
CASC4-204ENST00000557945 RHBDD3Q9Y3P4 386 aa18.11■□□□□ 0.49
CASC4-204ENST00000557945 V9GYS6 101 aa18.11■□□□□ 0.49
CASC4-204ENST00000557945 TACC2O95359 2948 aa18.11■□□□□ 0.49
CASC4-204ENST00000557945 ITPR2Q14571 2701 aa18.1■□□□□ 0.49
CASC4-204ENST00000557945 H0YL77 283 aa18.1■□□□□ 0.49
CASC4-204ENST00000557945 NDUFS7O75251 213 aa18.1■□□□□ 0.49
CASC4-204ENST00000557945 FAHP16930 419 aa18.1■□□□□ 0.49
CASC4-204ENST00000557945 ZNF12P17014 697 aa18.1■□□□□ 0.49
CASC4-204ENST00000557945 CELP19835 753 aa18.1■□□□□ 0.49
CASC4-204ENST00000557945 MAGEB1P43366 347 aa18.1■□□□□ 0.49
CASC4-204ENST00000557945 PTH2RP49190 550 aa18.1■□□□□ 0.49
CASC4-204ENST00000557945 ATP5J2P56134 94 aa18.1■□□□□ 0.49
CASC4-204ENST00000557945 BDH1Q02338 343 aa18.1■□□□□ 0.49
CASC4-204ENST00000557945 EMX1Q04741 257 aaPredicted RBP18.1■□□□□ 0.49
CASC4-204ENST00000557945 OR8G1Q15617 311 aa18.1■□□□□ 0.49
CASC4-204ENST00000557945 PCGF3Q3KNV8 242 aa18.1■□□□□ 0.49
CASC4-204ENST00000557945 CCDC54Q8NEL0 328 aa18.1■□□□□ 0.49
CASC4-204ENST00000557945 OR10AD1Q8NGE0 317 aa18.1■□□□□ 0.49
CASC4-204ENST00000557945 OR10AC1Q8NH08 325 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms