RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 RPL22L1Q6P5R6 122 aaKnown RBP13.04□□□□□ -0.32
NEDD1-213ENST00000557644 ZNF773Q6PK81 442 aa13.04□□□□□ -0.32
NEDD1-213ENST00000557644 TPK1Q9H3S4 243 aa13.04□□□□□ -0.32
NEDD1-213ENST00000557644 LOC107986453A0A1B0GWG9 222 aa13.03□□□□□ -0.32
NEDD1-213ENST00000557644 ZSCAN5BA6NJL1 495 aa13.03□□□□□ -0.32
NEDD1-213ENST00000557644 OGG1O15527 345 aa13.03□□□□□ -0.32
NEDD1-213ENST00000557644 LMX1BO60663 402 aa13.03□□□□□ -0.32
NEDD1-213ENST00000557644 HSMCR30P0CW71 290 aa13.03□□□□□ -0.32
NEDD1-213ENST00000557644 CFL1P23528 166 aaKnown RBP13.03□□□□□ -0.32
NEDD1-213ENST00000557644 ZNF676Q8N7Q3 588 aa13.03□□□□□ -0.32
NEDD1-213ENST00000557644 RPS4Y2Q8TD47 263 aa13.03□□□□□ -0.32
NEDD1-213ENST00000557644 OPA3Q9H6K4 179 aa13.03□□□□□ -0.32
NEDD1-213ENST00000557644 DYNLRB1Q9NP97 96 aa13.03□□□□□ -0.32
NEDD1-213ENST00000557644 ANKRD17O75179 2603 aaKnown RBP13.03□□□□□ -0.32
NEDD1-213ENST00000557644 HLA-DPB1P04440 258 aa13.03□□□□□ -0.32
NEDD1-213ENST00000557644 UBCP0CG48 685 aaKnown RBP13.03□□□□□ -0.32
NEDD1-213ENST00000557644 CELP19835 753 aa13.03□□□□□ -0.32
NEDD1-213ENST00000557644 PCMT1P22061 227 aa13.03□□□□□ -0.32
NEDD1-213ENST00000557644 MAGEB1P43366 347 aa13.03□□□□□ -0.32
NEDD1-213ENST00000557644 DMKNQ6E0U4 476 aaPredicted RBP13.03□□□□□ -0.32
NEDD1-213ENST00000557644 OR8G5Q8NG78 346 aa13.03□□□□□ -0.32
NEDD1-213ENST00000557644 OR5AK2Q8NH90 309 aa13.03□□□□□ -0.32
NEDD1-213ENST00000557644 SMIM19Q96E16 107 aa13.03□□□□□ -0.32
NEDD1-213ENST00000557644 VRK1Q99986 396 aaPredicted RBP13.03□□□□□ -0.32
NEDD1-213ENST00000557644 ZNF391Q9UJN7 358 aa13.03□□□□□ -0.32
NEDD1-213ENST00000557644 PLSCR5A0PG75 271 aa13.02□□□□□ -0.32
NEDD1-213ENST00000557644 OVOL3O00110 214 aa13.02□□□□□ -0.32
NEDD1-213ENST00000557644 SYT7O43581 403 aa13.02□□□□□ -0.32
NEDD1-213ENST00000557644 SPRY3O43610 288 aa13.02□□□□□ -0.32
NEDD1-213ENST00000557644 MRPS14O60783 128 aaKnown RBP13.02□□□□□ -0.32
NEDD1-213ENST00000557644 NDUFS7O75251 213 aa13.02□□□□□ -0.32
NEDD1-213ENST00000557644 DHRS3O75911 302 aa13.02□□□□□ -0.32
NEDD1-213ENST00000557644 RAF1P04049 648 aa13.02□□□□□ -0.32
NEDD1-213ENST00000557644 SELEP16581 610 aa13.02□□□□□ -0.32
NEDD1-213ENST00000557644 CCL1P22362 96 aa13.02□□□□□ -0.32
NEDD1-213ENST00000557644 PLPP7Q8NBV4 271 aa13.02□□□□□ -0.32
NEDD1-213ENST00000557644 OR14K1Q8NGZ2 314 aa13.02□□□□□ -0.32
NEDD1-213ENST00000557644 HAVCR2Q8TDQ0 301 aa13.02□□□□□ -0.32
NEDD1-213ENST00000557644 RGP1Q92546 391 aaPredicted RBP13.02□□□□□ -0.32
NEDD1-213ENST00000557644 DVL3Q92997 716 aaPredicted RBP13.02□□□□□ -0.32
NEDD1-213ENST00000557644 ZNF696Q9H7X3 374 aa13.02□□□□□ -0.32
NEDD1-213ENST00000557644 RHBDD3Q9Y3P4 386 aa13.02□□□□□ -0.32
NEDD1-213ENST00000557644 MAP1AP78559 2803 aaPredicted RBP13.02□□□□□ -0.32
NEDD1-213ENST00000557644 A0A1B0GVI7 797 aa13.02□□□□□ -0.33
NEDD1-213ENST00000557644 TMEM212A6NML5 194 aa13.02□□□□□ -0.33
NEDD1-213ENST00000557644 H0YL77 283 aa13.02□□□□□ -0.33
NEDD1-213ENST00000557644 ISG15P05161 165 aa13.02□□□□□ -0.33
NEDD1-213ENST00000557644 FAHP16930 419 aa13.02□□□□□ -0.33
NEDD1-213ENST00000557644 CA6P23280 308 aa13.02□□□□□ -0.33
NEDD1-213ENST00000557644 ZNF81P51508 661 aa13.02□□□□□ -0.33
NEDD1-213ENST00000557644 DMRTC1Q5HYR2 192 aa13.02□□□□□ -0.33
NEDD1-213ENST00000557644 DOK3Q7L591 496 aa13.02□□□□□ -0.33
NEDD1-213ENST00000557644 OR10AD1Q8NGE0 317 aa13.02□□□□□ -0.33
NEDD1-213ENST00000557644 GHSRQ92847 366 aa13.02□□□□□ -0.33
NEDD1-213ENST00000557644 PGLYRP3Q96LB9 341 aa13.02□□□□□ -0.33
NEDD1-213ENST00000557644 PIGLQ9Y2B2 252 aa13.02□□□□□ -0.33
NEDD1-213ENST00000557644 ACSM1Q08AH1 577 aa13.01□□□□□ -0.33
NEDD1-213ENST00000557644 TMEM244Q5VVB8 128 aa13.01□□□□□ -0.33
NEDD1-213ENST00000557644 SEMA6DQ8NFY4 1073 aa13.01□□□□□ -0.33
NEDD1-213ENST00000557644 TSPAN14Q8NG11 270 aa13.01□□□□□ -0.33
NEDD1-213ENST00000557644 OR13C5Q8NGS8 318 aa13.01□□□□□ -0.33
NEDD1-213ENST00000557644 OPALINQ96PE5 141 aa13.01□□□□□ -0.33
NEDD1-213ENST00000557644 NR1H4Q96RI1 486 aaPredicted RBP13.01□□□□□ -0.33
NEDD1-213ENST00000557644 SLC30A2Q9BRI3 323 aa13.01□□□□□ -0.33
NEDD1-213ENST00000557644 COMMD4Q9H0A8 199 aa13.01□□□□□ -0.33
NEDD1-213ENST00000557644 PMF1-BGLAPU3KQ54 211 aa13.01□□□□□ -0.33
NEDD1-213ENST00000557644 V9GYS6 101 aa13.01□□□□□ -0.33
NEDD1-213ENST00000557644 C17orf100A8MU93 164 aa13.01□□□□□ -0.33
NEDD1-213ENST00000557644 MLNRO43193 412 aa13.01□□□□□ -0.33
NEDD1-213ENST00000557644 LY6HO94772 140 aa13.01□□□□□ -0.33
NEDD1-213ENST00000557644 MAP2K3P46734 347 aa13.01□□□□□ -0.33
NEDD1-213ENST00000557644 TAS2R43P59537 309 aa13.01□□□□□ -0.33
NEDD1-213ENST00000557644 MOGQ16653 247 aa13.01□□□□□ -0.33
NEDD1-213ENST00000557644 SVOPQ8N4V2 548 aa13.01□□□□□ -0.33
NEDD1-213ENST00000557644 OR2Z1Q8NG97 314 aa13.01□□□□□ -0.33
NEDD1-213ENST00000557644 SORCS2Q96PQ0 1159 aa13.01□□□□□ -0.33
NEDD1-213ENST00000557644 MGLLQ99685 303 aa13.01□□□□□ -0.33
NEDD1-213ENST00000557644 TMEM100Q9NV29 134 aa13.01□□□□□ -0.33
NEDD1-213ENST00000557644 GPR160Q9UJ42 338 aa13.01□□□□□ -0.33
NEDD1-213ENST00000557644 LOC390937A0A1W2PQ73 354 aa13□□□□□ -0.33
NEDD1-213ENST00000557644 PLPP2O43688 288 aa13□□□□□ -0.33
NEDD1-213ENST00000557644 MTRF1O75570 445 aaKnown RBP13□□□□□ -0.33
NEDD1-213ENST00000557644 IGHV1-46P01743 117 aa13□□□□□ -0.33
NEDD1-213ENST00000557644 BMP4P12644 408 aa13□□□□□ -0.33
NEDD1-213ENST00000557644 ATP6V1B1P15313 513 aa13□□□□□ -0.33
NEDD1-213ENST00000557644 DDOSTP39656 456 aa13□□□□□ -0.33
NEDD1-213ENST00000557644 PPOXP50336 477 aa13□□□□□ -0.33
NEDD1-213ENST00000557644 CCL8P80075 99 aa13□□□□□ -0.33
NEDD1-213ENST00000557644 BDH1Q02338 343 aa13□□□□□ -0.33
NEDD1-213ENST00000557644 SPRNQ5BIV9 151 aa13□□□□□ -0.33
NEDD1-213ENST00000557644 LIPKQ5VXJ0 399 aa13□□□□□ -0.33
NEDD1-213ENST00000557644 Q6ZSR3 168 aa13□□□□□ -0.33
NEDD1-213ENST00000557644 ZNF367Q7RTV3 350 aa13□□□□□ -0.33
NEDD1-213ENST00000557644 PIGTQ969N2 578 aa13□□□□□ -0.33
NEDD1-213ENST00000557644 PAPOLGQ9BWT3 736 aaKnown RBP13□□□□□ -0.33
NEDD1-213ENST00000557644 MS4A5Q9H3V2 200 aa13□□□□□ -0.33
NEDD1-213ENST00000557644 CXorf56Q9H5V9 222 aa13□□□□□ -0.33
NEDD1-213ENST00000557644 MRPL15Q9P015 296 aaKnown RBP13□□□□□ -0.33
NEDD1-213ENST00000557644 HHLA2Q9UM44 414 aa13□□□□□ -0.33
NEDD1-213ENST00000557644 CCDC168Q8NDH2 2452 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms