RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 IL2RGP31785 369 aa10.55□□□□□ -0.72
SLIRP-211ENST00000557623 CD200P41217 278 aa10.55□□□□□ -0.72
SLIRP-211ENST00000557623 SNRPGP62308 76 aaKnown RBP10.55□□□□□ -0.72
SLIRP-211ENST00000557623 OCLNQ16625 522 aa10.55□□□□□ -0.72
SLIRP-211ENST00000557623 ZNF181Q2M3W8 571 aa10.55□□□□□ -0.72
SLIRP-211ENST00000557623 GFOD2Q3B7J2 385 aa10.55□□□□□ -0.72
SLIRP-211ENST00000557623 ZNF322Q6U7Q0 402 aaPredicted RBP10.55□□□□□ -0.72
SLIRP-211ENST00000557623 C1orf87Q8N0U7 546 aa10.55□□□□□ -0.72
SLIRP-211ENST00000557623 ZNF555Q8NEP9 628 aa10.55□□□□□ -0.72
SLIRP-211ENST00000557623 CSNK2A3Q8NEV1 391 aa10.55□□□□□ -0.72
SLIRP-211ENST00000557623 OR2T27Q8NH04 317 aa10.55□□□□□ -0.72
SLIRP-211ENST00000557623 MBOAT4Q96T53 435 aa10.55□□□□□ -0.72
SLIRP-211ENST00000557623 ADAT1Q9BUB4 502 aaKnown RBP10.55□□□□□ -0.72
SLIRP-211ENST00000557623 TMEM160Q9NX00 188 aa10.55□□□□□ -0.72
SLIRP-211ENST00000557623 ZNF319Q9P2F9 582 aa10.55□□□□□ -0.72
SLIRP-211ENST00000557623 A0A0U1RQV5 110 aa10.54□□□□□ -0.72
SLIRP-211ENST00000557623 LOC100130705A0A1B0GUX0 176 aa10.54□□□□□ -0.72
SLIRP-211ENST00000557623 ISPDA4D126 451 aa10.54□□□□□ -0.72
SLIRP-211ENST00000557623 LMX1BO60663 402 aa10.54□□□□□ -0.72
SLIRP-211ENST00000557623 TGFAP01135 160 aa10.54□□□□□ -0.72
SLIRP-211ENST00000557623 IRF2P14316 349 aa10.54□□□□□ -0.72
SLIRP-211ENST00000557623 GATA4P43694 442 aa10.54□□□□□ -0.72
SLIRP-211ENST00000557623 MTNR1AP48039 350 aa10.54□□□□□ -0.72
SLIRP-211ENST00000557623 GSK3AP49840 483 aa10.54□□□□□ -0.72
SLIRP-211ENST00000557623 CDH15P55291 814 aa10.54□□□□□ -0.72
SLIRP-211ENST00000557623 RCN1Q15293 331 aa10.54□□□□□ -0.72
SLIRP-211ENST00000557623 SPICQ8N5J4 248 aa10.54□□□□□ -0.72
SLIRP-211ENST00000557623 OR8B12Q8NGG6 310 aa10.54□□□□□ -0.72
SLIRP-211ENST00000557623 OR11L1Q8NGX0 322 aa10.54□□□□□ -0.72
SLIRP-211ENST00000557623 GAL3ST1Q99999 423 aa10.54□□□□□ -0.72
SLIRP-211ENST00000557623 MOB1AQ9H8S9 216 aa10.54□□□□□ -0.72
SLIRP-211ENST00000557623 ABCB9Q9NP78 766 aa10.54□□□□□ -0.72
SLIRP-211ENST00000557623 C14orf119Q9NWQ9 140 aa10.54□□□□□ -0.72
SLIRP-211ENST00000557623 FAM118AQ9NWS6 357 aa10.54□□□□□ -0.72
SLIRP-211ENST00000557623 FAM206AQ9NX38 181 aa10.54□□□□□ -0.72
SLIRP-211ENST00000557623 SMPD3Q9NY59 655 aaPredicted RBP10.54□□□□□ -0.72
SLIRP-211ENST00000557623 HIVEP2P31629 2446 aa10.54□□□□□ -0.72
SLIRP-211ENST00000557623 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.53□□□□□ -0.724e-15■■■■■ 30.4
SLIRP-211ENST00000557623 TMEM178BH3BS89 294 aa10.53□□□□□ -0.72
SLIRP-211ENST00000557623 WNT9BO14905 357 aa10.53□□□□□ -0.72
SLIRP-211ENST00000557623 SLC16A6O15403 523 aa10.53□□□□□ -0.72
SLIRP-211ENST00000557623 ENTPD6O75354 484 aa10.53□□□□□ -0.72
SLIRP-211ENST00000557623 CRLF1O75462 422 aa10.53□□□□□ -0.72
SLIRP-211ENST00000557623 IGHV2-70P01814 119 aa10.53□□□□□ -0.72
SLIRP-211ENST00000557623 KRT8P05787 483 aa10.53□□□□□ -0.72
SLIRP-211ENST00000557623 ATP6V1B1P15313 513 aa10.53□□□□□ -0.72
SLIRP-211ENST00000557623 HOXB4P17483 251 aaPredicted RBP10.53□□□□□ -0.72
SLIRP-211ENST00000557623 PCMT1P22061 227 aa10.53□□□□□ -0.72
SLIRP-211ENST00000557623 GNALP38405 381 aa10.53□□□□□ -0.72
SLIRP-211ENST00000557623 DVL1P1P54792 670 aaPredicted RBP10.53□□□□□ -0.72
SLIRP-211ENST00000557623 LMO4P61968 165 aa10.53□□□□□ -0.72
SLIRP-211ENST00000557623 BTG1P62324 171 aa10.53□□□□□ -0.72
SLIRP-211ENST00000557623 ACTC1P68032 377 aa10.53□□□□□ -0.72
SLIRP-211ENST00000557623 ACTA1P68133 377 aa10.53□□□□□ -0.72
SLIRP-211ENST00000557623 MAB21L1Q13394 359 aa10.53□□□□□ -0.72
SLIRP-211ENST00000557623 OR8B8Q15620 311 aa10.53□□□□□ -0.72
SLIRP-211ENST00000557623 TMEM155Q4W5P6 130 aa10.53□□□□□ -0.72
SLIRP-211ENST00000557623 MOGAT3Q86VF5 341 aa10.53□□□□□ -0.72
SLIRP-211ENST00000557623 MUC20Q8N307 709 aaPredicted RBP10.53□□□□□ -0.72
SLIRP-211ENST00000557623 KLHL36Q8N4N3 616 aa10.53□□□□□ -0.72
SLIRP-211ENST00000557623 PACRGLQ8N7B6 248 aa10.53□□□□□ -0.72
SLIRP-211ENST00000557623 OR10H4Q8NGA5 316 aa10.53□□□□□ -0.72
SLIRP-211ENST00000557623 OR8S1Q8NH09 359 aa10.53□□□□□ -0.72
SLIRP-211ENST00000557623 ZNF420Q8TAQ5 688 aaPredicted RBP10.53□□□□□ -0.72
SLIRP-211ENST00000557623 Q8TCH9 128 aa10.53□□□□□ -0.72
SLIRP-211ENST00000557623 UBE2FQ969M7 185 aa10.53□□□□□ -0.72
SLIRP-211ENST00000557623 Q96MT0 163 aa10.53□□□□□ -0.72
SLIRP-211ENST00000557623 SIGLEC11Q96RL6 698 aa10.53□□□□□ -0.72
SLIRP-211ENST00000557623 MYCBPQ99417 103 aaPredicted RBP10.53□□□□□ -0.72
SLIRP-211ENST00000557623 TBX5Q99593 518 aa10.53□□□□□ -0.72
SLIRP-211ENST00000557623 APOL4Q9BPW4 351 aa10.53□□□□□ -0.72
SLIRP-211ENST00000557623 SOX7Q9BT81 388 aa10.53□□□□□ -0.72
SLIRP-211ENST00000557623 TTTY10Q9BZA0 68 aa10.53□□□□□ -0.72
SLIRP-211ENST00000557623 PBOV1Q9GZY1 135 aa10.53□□□□□ -0.72
SLIRP-211ENST00000557623 ZNF665Q9H7R5 613 aa10.53□□□□□ -0.72
SLIRP-211ENST00000557623 FN3KRPQ9HA64 309 aa10.53□□□□□ -0.72
SLIRP-211ENST00000557623 LPAR3Q9UBY5 353 aa10.53□□□□□ -0.72
SLIRP-211ENST00000557623 NUFIP1Q9UHK0 495 aaKnown RBP10.53□□□□□ -0.72
SLIRP-211ENST00000557623 PCDHGB1Q9Y5G3 927 aa10.53□□□□□ -0.72
SLIRP-211ENST00000557623 R4GMQ9 66 aa10.53□□□□□ -0.72
SLIRP-211ENST00000557623 CSPG4Q6UVK1 2322 aa10.53□□□□□ -0.72
SLIRP-211ENST00000557623 A0A1W2PQL4 384 aaPredicted RBP10.52□□□□□ -0.73
SLIRP-211ENST00000557623 ANXA2P2A6NMY6 339 aa10.52□□□□□ -0.73
SLIRP-211ENST00000557623 PRR32B1ATL7 298 aa10.52□□□□□ -0.73
SLIRP-211ENST00000557623 ANKRD65E5RJM6 399 aa10.52□□□□□ -0.73
SLIRP-211ENST00000557623 LOC110117498-PIK3R3F6TDL0 507 aa10.52□□□□□ -0.73
SLIRP-211ENST00000557623 SULT1C4O75897 302 aa10.52□□□□□ -0.73
SLIRP-211ENST00000557623 FSTL3O95633 263 aa10.52□□□□□ -0.73
SLIRP-211ENST00000557623 PTBP3O95758 552 aaKnown RBP10.52□□□□□ -0.73
SLIRP-211ENST00000557623 IGHV2-5P01817 119 aa10.52□□□□□ -0.73
SLIRP-211ENST00000557623 LORP23490 312 aaPredicted RBP10.52□□□□□ -0.73
SLIRP-211ENST00000557623 MDH2P40926 338 aaKnown RBP10.52□□□□□ -0.73
SLIRP-211ENST00000557623 MAP2K3P46734 347 aa10.52□□□□□ -0.73
SLIRP-211ENST00000557623 PLEKHG7Q6ZR37 379 aa10.52□□□□□ -0.73
SLIRP-211ENST00000557623 GLCCI1Q86VQ1 547 aa10.52□□□□□ -0.73
SLIRP-211ENST00000557623 LRRC28Q86X40 367 aaPredicted RBP10.52□□□□□ -0.73
SLIRP-211ENST00000557623 COMMD2Q86X83 199 aa10.52□□□□□ -0.73
SLIRP-211ENST00000557623 GALNT4Q8N4A0 578 aa10.52□□□□□ -0.73
SLIRP-211ENST00000557623 RFLNBQ8N5W9 214 aa10.52□□□□□ -0.73
SLIRP-211ENST00000557623 YIPF7Q8N8F6 280 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms