RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 MUC4Q99102 2169 aa3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 IGHV3-35A0A0C4DH35 117 aa3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 KIR2DL5BA0A0G2JN68 375 aa3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 KIR2DL5BA0A0G2JPC4 375 aa3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 A0A1W2PRD5 423 aa3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 PRSS37A4D1T9 235 aa3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 ZNF99A8MXY4 864 aaPredicted RBP3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 ZBTB5O15062 677 aa3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 PLXNB1O43157 2135 aa3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 TRAPPC3O43617 180 aa3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 TCF21O43680 179 aa3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 KDELR3O43731 214 aa3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 MGRN1O60291 552 aa3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 CD160O95971 181 aa3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 IGHV3-13P01766 116 aa3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 PRB2P02812 416 aaPredicted RBP3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 SSR4P51571 173 aa3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 ADARB1P78563 741 aaKnown RBP3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 LCN2P80188 198 aa3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 ACVR1Q04771 509 aa3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 CDH17Q12864 832 aa3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 SLAQ13239 276 aa3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 C16orf72Q14CZ0 275 aa3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 CYTH1Q15438 398 aa3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 FAM83EQ2M2I3 478 aa3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 C11orf71Q6IPW1 123 aa3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 UNQ9370/PRO34162Q6UXP9 181 aa3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 IQCF2Q8IXL9 164 aa3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 KIR2DL5AQ8N109 375 aa3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 C6orf223Q8N319 242 aa3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 FBXO36Q8NEA4 188 aa3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 OR56A4Q8NGH8 313 aa3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 KIR2DL5BQ8NHK3 375 aa3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 ATP6V1G3Q96LB4 118 aa3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 CSPG4P5Q96PW8 444 aa3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 HIST1H4GQ99525 98 aa3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 VGLL1Q99990 258 aa3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 SOSTQ9BQB4 213 aa3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 APOL2Q9BQE5 337 aa3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 LHX5Q9H2C1 402 aa3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 TXLNGQ9NUQ3 528 aa3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 CLEC5AQ9NY25 188 aa3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 WWOXQ9NZC7 414 aa3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 CCDC59Q9P031 241 aaKnown RBP3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 IFNKQ9P0W0 207 aa3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 STOX2Q9P2F5 926 aaPredicted RBP3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 ZMAT5Q9UDW3 170 aaKnown RBP3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 KIF25Q9UIL4 384 aa3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 FLVCR2Q9UPI3 526 aa3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 UGT2A1Q9Y4X1 527 aa3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 BAZ2AQ9UIF9 1905 aaKnown RBP3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 FAT4Q6V0I7 4981 aa3.69□□□□□ -1.82
MTHFD1-216ENST00000557539 IGHV3OR16-13A0A075B7E8 117 aa3.68□□□□□ -1.82
MTHFD1-216ENST00000557539 IGHV7-81A0A0B4J1V7 117 aa3.68□□□□□ -1.82
MTHFD1-216ENST00000557539 USP27XA6NNY8 438 aa3.68□□□□□ -1.82
MTHFD1-216ENST00000557539 K7ERQ8 282 aa3.68□□□□□ -1.82
MTHFD1-216ENST00000557539 NMT2O60551 498 aa3.68□□□□□ -1.82
MTHFD1-216ENST00000557539 KRT16P08779 473 aa3.68□□□□□ -1.82
MTHFD1-216ENST00000557539 NR2C1P13056 603 aa3.68□□□□□ -1.82
MTHFD1-216ENST00000557539 GDF1P27539 372 aa3.68□□□□□ -1.82
MTHFD1-216ENST00000557539 KIR2DS4P43632 304 aa3.68□□□□□ -1.82
MTHFD1-216ENST00000557539 CCNG1P51959 295 aa3.68□□□□□ -1.82
MTHFD1-216ENST00000557539 RPS15AP62244 130 aaKnown RBP3.68□□□□□ -1.82
MTHFD1-216ENST00000557539 TGFBR3Q03167 851 aa3.68□□□□□ -1.82
MTHFD1-216ENST00000557539 FZD2Q14332 565 aa3.68□□□□□ -1.82
MTHFD1-216ENST00000557539 DEFB133Q30KQ1 61 aa3.68□□□□□ -1.82
MTHFD1-216ENST00000557539 TIMM50Q3ZCQ8 353 aa3.68□□□□□ -1.82
MTHFD1-216ENST00000557539 PAGE2BQ5JRK9 111 aa3.68□□□□□ -1.82
MTHFD1-216ENST00000557539 ULK3Q6PHR2 472 aa3.68□□□□□ -1.82
MTHFD1-216ENST00000557539 CNIH2Q6PI25 160 aa3.68□□□□□ -1.82
MTHFD1-216ENST00000557539 SPESP1Q6UW49 350 aa3.68□□□□□ -1.82
MTHFD1-216ENST00000557539 TMIGD1Q6UXZ0 262 aa3.68□□□□□ -1.82
MTHFD1-216ENST00000557539 PRSS41Q7RTY9 318 aa3.68□□□□□ -1.82
MTHFD1-216ENST00000557539 FAM122BQ7Z309 247 aa3.68□□□□□ -1.82
MTHFD1-216ENST00000557539 TMEM150AQ86TG1 271 aa3.68□□□□□ -1.82
MTHFD1-216ENST00000557539 FAM86B1Q8N7N1 296 aa3.68□□□□□ -1.82
MTHFD1-216ENST00000557539 PRELID2Q8N945 189 aa3.68□□□□□ -1.82
MTHFD1-216ENST00000557539 HSD17B11Q8NBQ5 300 aa3.68□□□□□ -1.82
MTHFD1-216ENST00000557539 OR13C9Q8NGT0 318 aa3.68□□□□□ -1.82
MTHFD1-216ENST00000557539 LRRC20Q8TCA0 184 aa3.68□□□□□ -1.82
MTHFD1-216ENST00000557539 MRAPQ8TCY5 172 aa3.68□□□□□ -1.82
MTHFD1-216ENST00000557539 ASZ1Q8WWH4 475 aa3.68□□□□□ -1.82
MTHFD1-216ENST00000557539 NEIL2Q969S2 332 aa3.68□□□□□ -1.82
MTHFD1-216ENST00000557539 APH1AQ96BI3 265 aa3.68□□□□□ -1.82
MTHFD1-216ENST00000557539 DUS3LQ96G46 650 aaKnown RBP3.68□□□□□ -1.82
MTHFD1-216ENST00000557539 C9orf72Q96LT7 481 aa3.68□□□□□ -1.82
MTHFD1-216ENST00000557539 COL21A1Q96P44 957 aa3.68□□□□□ -1.82
MTHFD1-216ENST00000557539 DDA1Q9BW61 102 aa3.68□□□□□ -1.82
MTHFD1-216ENST00000557539 ZYG11BQ9C0D3 744 aa3.68□□□□□ -1.82
MTHFD1-216ENST00000557539 Q9H3A6 140 aa3.68□□□□□ -1.82
MTHFD1-216ENST00000557539 ZNHIT6Q9NWK9 470 aaKnown RBP3.68□□□□□ -1.82
MTHFD1-216ENST00000557539 ZNF581Q9P0T4 197 aa3.68□□□□□ -1.82
MTHFD1-216ENST00000557539 DCDC2Q9UHG0 476 aa3.68□□□□□ -1.82
MTHFD1-216ENST00000557539 ING4Q9UNL4 249 aa3.68□□□□□ -1.82
MTHFD1-216ENST00000557539 CDH10Q9Y6N8 788 aa3.68□□□□□ -1.82
MTHFD1-216ENST00000557539 IGLV8-61A0A075B6I0 122 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 A0A0J9YWU9 116 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 GLYATL1P3A0A0U1RQE8 302 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 A0A1B0GW55 424 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 A0A1W2PPR1 153 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms