RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 CDH17Q12864 832 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 APOFQ13790 326 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 ZNF846Q147U1 533 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 TRAM2Q15035 370 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 PDK2Q15119 407 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 ISXQ2M1V0 245 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 PDZK1Q5T2W1 519 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 ZNF544Q6NX49 715 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 CCDC137Q6PK04 289 aaKnown RBP3.32□□□□□ -1.88
PRPF39-212ENST00000557477 UGT2A3Q6UWM9 527 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 TFAP2EQ6VUC0 442 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 SNX20Q7Z614 316 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 ARPINQ7Z6K5 226 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 SLC13A5Q86YT5 568 aaPredicted RBP3.32□□□□□ -1.88
PRPF39-212ENST00000557477 ZNF584Q8IVC4 421 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 SLC35F2Q8IXU6 374 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 SPAG16Q8N0X2 631 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 SVOPLQ8N434 492 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 EIF1ADQ8N9N8 165 aaKnown RBP3.32□□□□□ -1.88
PRPF39-212ENST00000557477 OR2L5Q8NG80 312 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 OR2L3Q8NG85 312 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 OR5D13Q8NGL4 314 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 OR56B4Q8NH76 319 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 UBA3Q8TBC4 463 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 SPPL2BQ8TCT7 592 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 DTX3LQ8TDB6 740 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 FGGYQ96C11 551 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 PAGE5Q96GU1 130 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 COQ2Q96H96 371 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 ZNF514Q96K75 400 aaPredicted RBP3.32□□□□□ -1.88
PRPF39-212ENST00000557477 RILPQ96NA2 401 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 KLHDC3Q9BQ90 382 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 TMEM246Q9BRR3 403 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 TCEAL7Q9BRU2 100 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 TUBGCP2Q9BSJ2 902 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 SRXN1Q9BYN0 137 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 DERL2Q9GZP9 239 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 METTL8Q9H825 291 aaKnown RBP3.32□□□□□ -1.88
PRPF39-212ENST00000557477 UGT1A7Q9HAW7 530 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 UGT1A10Q9HAW8 530 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 UGT1A8Q9HAW9 530 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 MYOZ1Q9NP98 299 aaPredicted RBP3.32□□□□□ -1.88
PRPF39-212ENST00000557477 BIN3Q9NQY0 253 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 CD274Q9NZQ7 290 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 BTNL2Q9UIR0 455 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 MMP17Q9ULZ9 603 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 SAR1BQ9Y6B6 198 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 NID2Q14112 1375 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 COL4A2P08572 1712 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 FRYQ5TBA9 3013 aa3.32□□□□□ -1.88
PRPF39-212ENST00000557477 NOTCH3Q9UM47 2321 aa3.31□□□□□ -1.88
PRPF39-212ENST00000557477 TRAV26-1A0A087WT03 109 aa3.31□□□□□ -1.88
PRPF39-212ENST00000557477 IGHV7-81A0A0B4J1V7 117 aa3.31□□□□□ -1.88
PRPF39-212ENST00000557477 A0A1B0GUS0 222 aa3.31□□□□□ -1.88
PRPF39-212ENST00000557477 ISPDA4D126 451 aa3.31□□□□□ -1.88
PRPF39-212ENST00000557477 LINC00862A6NCI5 91 aa3.31□□□□□ -1.88
PRPF39-212ENST00000557477 RFPL4AA6NLU0 287 aa3.31□□□□□ -1.88
PRPF39-212ENST00000557477 CENPXA8MT69 81 aa3.31□□□□□ -1.88
PRPF39-212ENST00000557477 TRDCB7Z8K6 153 aa3.31□□□□□ -1.88
PRPF39-212ENST00000557477 RFPL4AL1F8VTS6 287 aa3.31□□□□□ -1.88
PRPF39-212ENST00000557477 ABCD4O14678 606 aa3.31□□□□□ -1.88
PRPF39-212ENST00000557477 CXCL13O43927 109 aa3.31□□□□□ -1.88
PRPF39-212ENST00000557477 OR10H3O60404 316 aa3.31□□□□□ -1.88
PRPF39-212ENST00000557477 ENTPD5O75356 428 aa3.31□□□□□ -1.88
PRPF39-212ENST00000557477 MED6O75586 246 aa3.31□□□□□ -1.88
PRPF39-212ENST00000557477 CLPXO76031 633 aa3.31□□□□□ -1.88
PRPF39-212ENST00000557477 IL1BP01584 269 aa3.31□□□□□ -1.88
PRPF39-212ENST00000557477 SERPINA5P05154 406 aa3.31□□□□□ -1.88
PRPF39-212ENST00000557477 KLK3P07288 261 aaPredicted RBP3.31□□□□□ -1.88
PRPF39-212ENST00000557477 PSKH1P11801 424 aa3.31□□□□□ -1.88
PRPF39-212ENST00000557477 KCNE1P15382 129 aa3.31□□□□□ -1.88
PRPF39-212ENST00000557477 NCK1P16333 377 aa3.31□□□□□ -1.88
PRPF39-212ENST00000557477 PSMB1P20618 241 aaKnown RBP3.31□□□□□ -1.88
PRPF39-212ENST00000557477 ZBTB25P24278 435 aa3.31□□□□□ -1.88
PRPF39-212ENST00000557477 TNFSF9P41273 254 aa3.31□□□□□ -1.88
PRPF39-212ENST00000557477 OMPP47874 163 aa3.31□□□□□ -1.88
PRPF39-212ENST00000557477 CSNK1DP48730 415 aa3.31□□□□□ -1.88
PRPF39-212ENST00000557477 HLCSP50747 726 aa3.31□□□□□ -1.88
PRPF39-212ENST00000557477 BIDP55957 195 aa3.31□□□□□ -1.88
PRPF39-212ENST00000557477 RIPPLY3P57055 190 aa3.31□□□□□ -1.88
PRPF39-212ENST00000557477 PSPHP78330 225 aa3.31□□□□□ -1.88
PRPF39-212ENST00000557477 TFAMQ00059 246 aaKnown RBP3.31□□□□□ -1.88
PRPF39-212ENST00000557477 LRRC63Q05C16 580 aa3.31□□□□□ -1.88
PRPF39-212ENST00000557477 DGCR6Q14129 220 aa3.31□□□□□ -1.88
PRPF39-212ENST00000557477 ZNHIT3Q15649 155 aaPredicted RBP3.31□□□□□ -1.88
PRPF39-212ENST00000557477 UAP1Q16222 522 aaPredicted RBP3.31□□□□□ -1.88
PRPF39-212ENST00000557477 EXOC3L2Q2M3D2 409 aa3.31□□□□□ -1.88
PRPF39-212ENST00000557477 GPRC6AQ5T6X5 926 aa3.31□□□□□ -1.88
PRPF39-212ENST00000557477 METAP1DQ6UB28 335 aaPredicted RBP3.31□□□□□ -1.88
PRPF39-212ENST00000557477 Q6ZPB1 254 aaPredicted RBP3.31□□□□□ -1.88
PRPF39-212ENST00000557477 PAGE2Q7Z2X7 111 aa3.31□□□□□ -1.88
PRPF39-212ENST00000557477 SMIM15Q7Z3B0 74 aa3.31□□□□□ -1.88
PRPF39-212ENST00000557477 HSD17B13Q7Z5P4 300 aaPredicted RBP3.31□□□□□ -1.88
PRPF39-212ENST00000557477 CROCCP2Q86T23 111 aa3.31□□□□□ -1.88
PRPF39-212ENST00000557477 NT5DC3Q86UY8 548 aa3.31□□□□□ -1.88
PRPF39-212ENST00000557477 GID4Q8IVV7 300 aa3.31□□□□□ -1.88
PRPF39-212ENST00000557477 NRMQ8IXM6 262 aa3.31□□□□□ -1.88
PRPF39-212ENST00000557477 PRSS58Q8IYP2 241 aa3.31□□□□□ -1.88
PRPF39-212ENST00000557477 C4orf33Q8N1A6 199 aa3.31□□□□□ -1.88
PRPF39-212ENST00000557477 ZNF786Q8N393 782 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms