RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 AMDHD2Q9Y303 409 aa15.47■□□□□ 0.07
PTPN21-208ENST00000556564 ZNF236Q9UL36 1845 aa15.47■□□□□ 0.07
PTPN21-208ENST00000556564 MEX3AA1L020 520 aaKnown RBP15.47■□□□□ 0.07
PTPN21-208ENST00000556564 LGALS8O00214 317 aa15.47■□□□□ 0.07
PTPN21-208ENST00000556564 ALOX5APP20292 161 aa15.47■□□□□ 0.07
PTPN21-208ENST00000556564 TGFBR1P36897 503 aa15.47■□□□□ 0.07
PTPN21-208ENST00000556564 CCDC71Q8IV32 467 aaPredicted RBP15.47■□□□□ 0.07
PTPN21-208ENST00000556564 C4orf45Q96LM5 186 aa15.47■□□□□ 0.07
PTPN21-208ENST00000556564 LIPT2A6NK58 231 aa15.47■□□□□ 0.07
PTPN21-208ENST00000556564 SLC25A1P53007 311 aa15.47■□□□□ 0.07
PTPN21-208ENST00000556564 OR51S1Q8NGJ8 323 aa15.47■□□□□ 0.07
PTPN21-208ENST00000556564 TRMT61AQ96FX7 289 aaKnown RBP15.47■□□□□ 0.07
PTPN21-208ENST00000556564 PLK3Q9H4B4 646 aa15.47■□□□□ 0.07
PTPN21-208ENST00000556564 PLCXD1Q9NUJ7 323 aa15.47■□□□□ 0.07
PTPN21-208ENST00000556564 RNF150Q9ULK6 438 aa15.47■□□□□ 0.07
PTPN21-208ENST00000556564 MED6O75586 246 aa15.47■□□□□ 0.07
PTPN21-208ENST00000556564 PSMB1P20618 241 aaKnown RBP15.47■□□□□ 0.07
PTPN21-208ENST00000556564 PILRAQ9UKJ1 303 aa15.47■□□□□ 0.07
PTPN21-208ENST00000556564 SDCBPO00560 298 aaPredicted RBP15.46■□□□□ 0.07
PTPN21-208ENST00000556564 RPS16P62249 146 aaKnown RBP15.46■□□□□ 0.07
PTPN21-208ENST00000556564 C12orf73Q69YU5 71 aa15.46■□□□□ 0.07
PTPN21-208ENST00000556564 ATF4P18848 351 aaPredicted RBP15.46■□□□□ 0.07
PTPN21-208ENST00000556564 ETFDHQ16134 617 aa15.46■□□□□ 0.07
PTPN21-208ENST00000556564 PRAMEF5Q5TYX0 476 aa15.46■□□□□ 0.07
PTPN21-208ENST00000556564 PRAMEF6Q5VXH4 476 aa15.46■□□□□ 0.07
PTPN21-208ENST00000556564 TMEM217Q8N7C4 229 aa15.46■□□□□ 0.07
PTPN21-208ENST00000556564 OR2AK2Q8NG84 335 aa15.46■□□□□ 0.07
PTPN21-208ENST00000556564 GDF9O60383 454 aa15.46■□□□□ 0.07
PTPN21-208ENST00000556564 GLI4P10075 376 aa15.46■□□□□ 0.07
PTPN21-208ENST00000556564 DLX5P56178 289 aa15.46■□□□□ 0.07
PTPN21-208ENST00000556564 C21orf58P58505 322 aa15.46■□□□□ 0.07
PTPN21-208ENST00000556564 RTL8BQ17RB0 113 aa15.46■□□□□ 0.07
PTPN21-208ENST00000556564 PDZD9Q8IXQ8 264 aa15.46■□□□□ 0.07
PTPN21-208ENST00000556564 PLPPR2Q96GM1 343 aa15.46■□□□□ 0.07
PTPN21-208ENST00000556564 RAB33BQ9H082 229 aa15.46■□□□□ 0.07
PTPN21-208ENST00000556564 FGF20Q9NP95 211 aaPredicted RBP15.46■□□□□ 0.07
PTPN21-208ENST00000556564 SCN3AQ9NY46 2000 aa15.46■□□□□ 0.07
PTPN21-208ENST00000556564 WDR1O75083 606 aa15.46■□□□□ 0.06
PTPN21-208ENST00000556564 CDK5Q00535 292 aa15.46■□□□□ 0.06
PTPN21-208ENST00000556564 ACSM1Q08AH1 577 aa15.46■□□□□ 0.06
PTPN21-208ENST00000556564 SKP2Q13309 424 aa15.46■□□□□ 0.06
PTPN21-208ENST00000556564 ATPAF1Q5TC12 328 aaPredicted RBP15.46■□□□□ 0.06
PTPN21-208ENST00000556564 C20orf85Q9H1P6 137 aa15.46■□□□□ 0.06
PTPN21-208ENST00000556564 C12orf10Q9HB07 376 aa15.46■□□□□ 0.06
PTPN21-208ENST00000556564 SSUH2Q9Y2M2 353 aa15.46■□□□□ 0.06
PTPN21-208ENST00000556564 K7EPK0 472 aa15.45■□□□□ 0.06
PTPN21-208ENST00000556564 SRPXP78539 464 aa15.45■□□□□ 0.06
PTPN21-208ENST00000556564 C6orf183Q5T699 404 aa15.45■□□□□ 0.06
PTPN21-208ENST00000556564 CMTM4Q8IZR5 234 aa15.45■□□□□ 0.06
PTPN21-208ENST00000556564 FAM71E2Q8N5Q1 922 aa15.45■□□□□ 0.06
PTPN21-208ENST00000556564 OR56B4Q8NH76 319 aa15.45■□□□□ 0.06
PTPN21-208ENST00000556564 ANKRD34CP0C6C1 535 aa15.45■□□□□ 0.06
PTPN21-208ENST00000556564 TMEM11P17152 192 aa15.45■□□□□ 0.06
PTPN21-208ENST00000556564 MICBQ29980 383 aa15.45■□□□□ 0.06
PTPN21-208ENST00000556564 OR5B12Q96R08 314 aa15.45■□□□□ 0.06
PTPN21-208ENST00000556564 RAB1BQ9H0U4 201 aa15.45■□□□□ 0.06
PTPN21-208ENST00000556564 TNFRSF19Q9NS68 423 aa15.45■□□□□ 0.06
PTPN21-208ENST00000556564 MGMTP16455 207 aa15.45■□□□□ 0.06
PTPN21-208ENST00000556564 ID4P47928 161 aa15.45■□□□□ 0.06
PTPN21-208ENST00000556564 RAB4BP61018 213 aa15.45■□□□□ 0.06
PTPN21-208ENST00000556564 C1orf185Q5T7R7 199 aa15.45■□□□□ 0.06
PTPN21-208ENST00000556564 DRAM2Q6UX65 266 aa15.45■□□□□ 0.06
PTPN21-208ENST00000556564 MYOZ1Q9NP98 299 aaPredicted RBP15.45■□□□□ 0.06
PTPN21-208ENST00000556564 FBXO7Q9Y3I1 522 aa15.45■□□□□ 0.06
PTPN21-208ENST00000556564 MN1Q10571 1320 aaPredicted RBP15.45■□□□□ 0.06
PTPN21-208ENST00000556564 TRGV10A0A0A0MS01 117 aa15.45■□□□□ 0.06
PTPN21-208ENST00000556564 PRDX4Q13162 271 aa15.45■□□□□ 0.06
PTPN21-208ENST00000556564 THSD4Q6ZMP0 1018 aa15.45■□□□□ 0.06
PTPN21-208ENST00000556564 S100A7AQ86SG5 101 aa15.45■□□□□ 0.06
PTPN21-208ENST00000556564 ATG4DQ86TL0 474 aaPredicted RBP15.45■□□□□ 0.06
PTPN21-208ENST00000556564 ADGRG3Q86Y34 549 aa15.45■□□□□ 0.06
PTPN21-208ENST00000556564 NUDCD2Q8WVJ2 157 aa15.45■□□□□ 0.06
PTPN21-208ENST00000556564 ZNF416Q9BWM5 594 aa15.45■□□□□ 0.06
PTPN21-208ENST00000556564 A3GALT2U3KPV4 340 aa15.45■□□□□ 0.06
PTPN21-208ENST00000556564 JUNBP17275 347 aaPredicted RBP15.45■□□□□ 0.06
PTPN21-208ENST00000556564 SRP14P37108 136 aaKnown RBP15.45■□□□□ 0.06
PTPN21-208ENST00000556564 ECI1P42126 302 aa15.45■□□□□ 0.06
PTPN21-208ENST00000556564 OR52I2Q8NH67 350 aa15.45■□□□□ 0.06
PTPN21-208ENST00000556564 ZC3H10Q96K80 434 aaKnown RBP15.45■□□□□ 0.06
PTPN21-208ENST00000556564 LRP5LA4QPB2 252 aa15.44■□□□□ 0.06
PTPN21-208ENST00000556564 CDC42EP2O14613 210 aa15.44■□□□□ 0.06
PTPN21-208ENST00000556564 DUSP1P28562 367 aa15.44■□□□□ 0.06
PTPN21-208ENST00000556564 HIKESHIQ53FT3 197 aa15.44■□□□□ 0.06
PTPN21-208ENST00000556564 VWCEQ96DN2 955 aa15.44■□□□□ 0.06
PTPN21-208ENST00000556564 RALGAPA2Q2PPJ7 1873 aa15.44■□□□□ 0.06
PTPN21-208ENST00000556564 TPT1P13693 172 aaKnown RBP15.44■□□□□ 0.06
PTPN21-208ENST00000556564 SSTR2P30874 369 aa15.44■□□□□ 0.06
PTPN21-208ENST00000556564 NRARPQ7Z6K4 114 aa15.44■□□□□ 0.06
PTPN21-208ENST00000556564 SLC7A6Q92536 515 aa15.44■□□□□ 0.06
PTPN21-208ENST00000556564 SERTAD4Q9NUC0 356 aa15.44■□□□□ 0.06
PTPN21-208ENST00000556564 CCL27Q9Y4X3 112 aa15.44■□□□□ 0.06
PTPN21-208ENST00000556564 CTXN2P0C2S0 81 aa15.44■□□□□ 0.06
PTPN21-208ENST00000556564 CTLA4P16410 223 aa15.44■□□□□ 0.06
PTPN21-208ENST00000556564 GNG10P50151 68 aa15.44■□□□□ 0.06
PTPN21-208ENST00000556564 ZNF546Q86UE3 836 aa15.44■□□□□ 0.06
PTPN21-208ENST00000556564 CATSPERDQ86XM0 798 aa15.44■□□□□ 0.06
PTPN21-208ENST00000556564 OR13G1Q8NGZ3 307 aa15.44■□□□□ 0.06
PTPN21-208ENST00000556564 METTL17Q9H7H0 456 aaPredicted RBP15.44■□□□□ 0.06
PTPN21-208ENST00000556564 S100A7P31151 101 aa15.44■□□□□ 0.06
PTPN21-208ENST00000556564 GNG3P63215 75 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms