RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 TMEM255BQ8WV15 326 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 S100ZQ8WXG8 99 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 BORCS5Q969J3 196 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 BPIFA2Q96DR5 249 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 TECTBQ96PL2 329 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 IL4I1Q96RQ9 567 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 WFDC6Q9BQY6 131 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 RSPO3Q9BXY4 272 aaPredicted RBP4.46□□□□□ -1.7
SRP54-211ENST00000556445 OR8D2Q9GZM6 311 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 LAT2Q9GZY6 243 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 HDHD2Q9H0R4 259 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 OR52D1Q9H346 318 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 PLGRKTQ9HBL7 147 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 MCCC2Q9HCC0 563 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 HMG20AQ9NP66 347 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 FGF20Q9NP95 211 aaPredicted RBP4.46□□□□□ -1.7
SRP54-211ENST00000556445 CTPS2Q9NRF8 586 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 INPP5EQ9NRR6 644 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 ZNF275Q9NSD4 429 aaPredicted RBP4.46□□□□□ -1.7
SRP54-211ENST00000556445 GPR83Q9NYM4 423 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 DHCR7Q9UBM7 475 aaKnown RBP4.46□□□□□ -1.7
SRP54-211ENST00000556445 KLHL21Q9UJP4 597 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 ZNF346Q9UL40 294 aaKnown RBP4.46□□□□□ -1.7
SRP54-211ENST00000556445 PRELID1Q9Y255 219 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 SPTBP11277 2137 aa4.46□□□□□ -1.7
SRP54-211ENST00000556445 COL5A1P20908 1838 aaPredicted RBP4.46□□□□□ -1.7
SRP54-211ENST00000556445 TRAV18A0A075B6X5 111 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 A0A087WUJ7 227 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 NPIPA5A0A0B4J1W7 369 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 IGHV5-10-1A0A0J9YXX1 117 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 OR2M5A3KFT3 312 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 A6NNC1 897 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 RIIAD1A6NNX1 92 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 EFCAB9A8MZ26 197 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 FAM90A26D6RGX4 464 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 NPIPA7E9PJI5 369 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 CCRL2O00421 344 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 HSPB6O14558 160 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 SURF4O15260 269 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 AIREO43918 545 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 ENTPD6O75354 484 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 SCRG1O75711 98 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 OR2F2O95006 317 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 NDUFB2O95178 105 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 UTS2O95399 124 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 WDPCPO95876 746 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 LCKP06239 509 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 KLK3P07288 261 aaPredicted RBP4.45□□□□□ -1.7
SRP54-211ENST00000556445 GP1BAP07359 652 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 GKN3PP0CG01 181 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 NPIPA8P0DM63 369 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 ADORA3P0DMS8 318 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 FGF5P12034 268 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 IRF2P14316 349 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 PGCP20142 388 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 ACKR3P25106 362 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 PSMA1P25786 263 aaKnown RBP4.45□□□□□ -1.7
SRP54-211ENST00000556445 LAP3P28838 519 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 C21orf33P30042 268 aaPredicted RBP4.45□□□□□ -1.7
SRP54-211ENST00000556445 HTR1FP30939 366 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 MAP2K4P45985 399 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 POU3F4P49335 361 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 THBS3P49746 956 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 CDH11P55287 796 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 WNT4P56705 351 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 KRTAP10-9P60411 292 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 CCL7P80098 99 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 LGALS3BPQ08380 585 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 PLCXD2Q0VAA5 305 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 MLLT11Q13015 90 aaPredicted RBP4.45□□□□□ -1.7
SRP54-211ENST00000556445 EXOSC2Q13868 293 aaKnown RBP4.45□□□□□ -1.7
SRP54-211ENST00000556445 EBPQ15125 230 aaKnown RBP4.45□□□□□ -1.7
SRP54-211ENST00000556445 SPHARQ15513 63 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 ISXQ2M1V0 245 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 ACSM5Q6NUN0 579 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 GUSBP11Q6P575 273 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 SMARCD3Q6STE5 483 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 NPSR1Q6W5P4 371 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 TMPRSS11AQ6ZMR5 421 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 DGAT2L6Q6ZPD8 337 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 HMGN2P46Q86SG4 172 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 OAFQ86UD1 273 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 MUC20Q8N307 709 aaPredicted RBP4.45□□□□□ -1.7
SRP54-211ENST00000556445 METTL27Q8N6F8 245 aaPredicted RBP4.45□□□□□ -1.7
SRP54-211ENST00000556445 EID2Q8N6I1 236 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 OR1L4Q8NGR5 311 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 NUBPLQ8TB37 319 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 FANK1Q8TC84 345 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 ZNF721Q8TF20 911 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 CACNG8Q8WXS5 425 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 NRGNQ92686 78 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 ADIPOR1Q96A54 375 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 LGALS12Q96DT0 336 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 ZHX1-C8orf76Q96EF9 292 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 SGTBQ96EQ0 304 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 FOXN4Q96NZ1 517 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 LPAR4Q99677 370 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 MGLLQ99685 303 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 SH3GL3Q99963 347 aa4.45□□□□□ -1.7
SRP54-211ENST00000556445 PRSS27Q9BQR3 290 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms