RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 PRR31Q5SQ13 230 aa18.75■□□□□ 0.59
ACTN1-220ENST00000556433 SLC16A9Q7RTY1 509 aa18.75■□□□□ 0.59
ACTN1-220ENST00000556433 GCSAMQ8N6F7 178 aa18.75■□□□□ 0.59
ACTN1-220ENST00000556433 OR10G2Q8NGC3 310 aa18.75■□□□□ 0.59
ACTN1-220ENST00000556433 OR8S1Q8NH09 359 aa18.75■□□□□ 0.59
ACTN1-220ENST00000556433 OTULINQ96BN8 352 aa18.75■□□□□ 0.59
ACTN1-220ENST00000556433 TOR3AQ9H497 397 aa18.75■□□□□ 0.59
ACTN1-220ENST00000556433 PRDM13Q9H4Q3 707 aa18.75■□□□□ 0.59
ACTN1-220ENST00000556433 SP140LQ9H930 580 aa18.75■□□□□ 0.59
ACTN1-220ENST00000556433 MED20Q9H944 212 aa18.75■□□□□ 0.59
ACTN1-220ENST00000556433 CMC2Q9NRP2 79 aa18.75■□□□□ 0.59
ACTN1-220ENST00000556433 KIF17Q9P2E2 1029 aa18.75■□□□□ 0.59
ACTN1-220ENST00000556433 FAM183AA6NL82 134 aa18.74■□□□□ 0.59
ACTN1-220ENST00000556433 TOX4O94842 621 aa18.74■□□□□ 0.59
ACTN1-220ENST00000556433 LHBP01229 141 aa18.74■□□□□ 0.59
ACTN1-220ENST00000556433 FAM3AP98173 230 aa18.74■□□□□ 0.59
ACTN1-220ENST00000556433 RUSC1-AS1Q66K80 236 aa18.74■□□□□ 0.59
ACTN1-220ENST00000556433 DPY19L4Q7Z388 723 aa18.74■□□□□ 0.59
ACTN1-220ENST00000556433 ERI1Q8IV48 349 aaKnown RBP18.74■□□□□ 0.59
ACTN1-220ENST00000556433 OR6N2Q8NGY6 317 aa18.74■□□□□ 0.59
ACTN1-220ENST00000556433 TEX47Q8TBZ9 253 aa18.74■□□□□ 0.59
ACTN1-220ENST00000556433 TMIGD2Q96BF3 282 aa18.74■□□□□ 0.59
ACTN1-220ENST00000556433 REEP6Q96HR9 211 aa18.74■□□□□ 0.59
ACTN1-220ENST00000556433 INTS14Q96SY0 518 aa18.74■□□□□ 0.59
ACTN1-220ENST00000556433 NIPSNAP1Q9BPW8 284 aa18.74■□□□□ 0.59
ACTN1-220ENST00000556433 ABHD6Q9BV23 337 aa18.74■□□□□ 0.59
ACTN1-220ENST00000556433 ZNF696Q9H7X3 374 aa18.74■□□□□ 0.59
ACTN1-220ENST00000556433 SMURF1Q9HCE7 757 aa18.74■□□□□ 0.59
ACTN1-220ENST00000556433 TNFRSF19Q9NS68 423 aa18.74■□□□□ 0.59
ACTN1-220ENST00000556433 APOC1P02654 83 aa18.73■□□□□ 0.59
ACTN1-220ENST00000556433 OMGP23515 440 aa18.73■□□□□ 0.59
ACTN1-220ENST00000556433 GSTT1P30711 240 aa18.73■□□□□ 0.59
ACTN1-220ENST00000556433 GRK5P34947 590 aa18.73■□□□□ 0.59
ACTN1-220ENST00000556433 CD300LDQ6UXZ3 194 aa18.73■□□□□ 0.59
ACTN1-220ENST00000556433 FAM57BQ71RH2 274 aa18.73■□□□□ 0.59
ACTN1-220ENST00000556433 FAM90A1Q86YD7 464 aa18.73■□□□□ 0.59
ACTN1-220ENST00000556433 C11orf53Q8IXP5 236 aa18.73■□□□□ 0.59
ACTN1-220ENST00000556433 PNLDC1Q8NA58 520 aaKnown RBP18.73■□□□□ 0.59
ACTN1-220ENST00000556433 RNF133Q8WVZ7 376 aa18.73■□□□□ 0.59
ACTN1-220ENST00000556433 WDFY2Q96P53 400 aa18.73■□□□□ 0.59
ACTN1-220ENST00000556433 CCT8L2Q96SF2 557 aa18.73■□□□□ 0.59
ACTN1-220ENST00000556433 TBX15Q96SF7 602 aa18.73■□□□□ 0.59
ACTN1-220ENST00000556433 FEVQ99581 238 aa18.73■□□□□ 0.59
ACTN1-220ENST00000556433 NOX4Q9NPH5 578 aa18.73■□□□□ 0.59
ACTN1-220ENST00000556433 IGHV3OR15-7A0A075B7D8 119 aa18.72■□□□□ 0.59
ACTN1-220ENST00000556433 SRRM5B3KS81 715 aa18.72■□□□□ 0.59
ACTN1-220ENST00000556433 H3BN98 237 aa18.72■□□□□ 0.59
ACTN1-220ENST00000556433 MMP9P14780 707 aa18.72■□□□□ 0.59
ACTN1-220ENST00000556433 MDKP21741 143 aaPredicted RBP18.72■□□□□ 0.59
ACTN1-220ENST00000556433 METTL11BQ5VVY1 283 aa18.72■□□□□ 0.59
ACTN1-220ENST00000556433 Q6YL49 198 aa18.72■□□□□ 0.59
ACTN1-220ENST00000556433 BTN2A1Q7KYR7 527 aa18.72■□□□□ 0.59
ACTN1-220ENST00000556433 IQCF1Q8N6M8 205 aa18.72■□□□□ 0.59
ACTN1-220ENST00000556433 GIPC3Q8TF64 312 aa18.72■□□□□ 0.59
ACTN1-220ENST00000556433 LRGUKQ96M69 825 aa18.72■□□□□ 0.59
ACTN1-220ENST00000556433 RNPEPL1Q9HAU8 725 aa18.72■□□□□ 0.59
ACTN1-220ENST00000556433 DNAJC27Q9NZQ0 273 aa18.72■□□□□ 0.59
ACTN1-220ENST00000556433 CENPVL3A0A0U1RRI6 287 aa18.71■□□□□ 0.59
ACTN1-220ENST00000556433 DVL1O14640 695 aa18.71■□□□□ 0.59
ACTN1-220ENST00000556433 WIPF1O43516 503 aa18.71■□□□□ 0.59
ACTN1-220ENST00000556433 GLCEO94923 617 aa18.71■□□□□ 0.59
ACTN1-220ENST00000556433 RAP2AP10114 183 aa18.71■□□□□ 0.59
ACTN1-220ENST00000556433 ZNF121P58317 390 aaPredicted RBP18.71■□□□□ 0.59
ACTN1-220ENST00000556433 TEX36Q5VZQ5 186 aa18.71■□□□□ 0.59
ACTN1-220ENST00000556433 SHFQ7M4L6 423 aa18.71■□□□□ 0.59
ACTN1-220ENST00000556433 PRSS45Q7RTY3 260 aa18.71■□□□□ 0.59
ACTN1-220ENST00000556433 WDR86Q86TI4 376 aa18.71■□□□□ 0.59
ACTN1-220ENST00000556433 OR52H1Q8NGJ2 320 aa18.71■□□□□ 0.59
ACTN1-220ENST00000556433 LRRC29Q8WV35 223 aa18.71■□□□□ 0.59
ACTN1-220ENST00000556433 GATAD2BQ8WXI9 593 aa18.71■□□□□ 0.59
ACTN1-220ENST00000556433 AMELYQ99218 206 aa18.71■□□□□ 0.59
ACTN1-220ENST00000556433 OR10A2Q9H208 303 aa18.71■□□□□ 0.59
ACTN1-220ENST00000556433 OR51V1Q9H2C8 321 aa18.71■□□□□ 0.59
ACTN1-220ENST00000556433 MARCH7Q9H992 704 aa18.71■□□□□ 0.59
ACTN1-220ENST00000556433 BRD7Q9NPI1 651 aa18.71■□□□□ 0.59
ACTN1-220ENST00000556433 hCG_38984A0A1B0GV85 526 aa18.7■□□□□ 0.58
ACTN1-220ENST00000556433 FAM181BA6NEQ2 426 aa18.7■□□□□ 0.58
ACTN1-220ENST00000556433 FCN3O75636 299 aa18.7■□□□□ 0.58
ACTN1-220ENST00000556433 ECDO95905 644 aaPredicted RBP18.7■□□□□ 0.58
ACTN1-220ENST00000556433 CRYBA1P05813 215 aa18.7■□□□□ 0.58
ACTN1-220ENST00000556433 H2BFMP0C1H6 154 aa18.7■□□□□ 0.58
ACTN1-220ENST00000556433 CALB2P22676 271 aa18.7■□□□□ 0.58
ACTN1-220ENST00000556433 CFL1P23528 166 aaKnown RBP18.7■□□□□ 0.58
ACTN1-220ENST00000556433 GSK3AP49840 483 aa18.7■□□□□ 0.58
ACTN1-220ENST00000556433 ARF6P62330 175 aa18.7■□□□□ 0.58
ACTN1-220ENST00000556433 GK3PQ14409 553 aa18.7■□□□□ 0.58
ACTN1-220ENST00000556433 GFOD2Q3B7J2 385 aa18.7■□□□□ 0.58
ACTN1-220ENST00000556433 OR1M1Q8NGA1 313 aa18.7■□□□□ 0.58
ACTN1-220ENST00000556433 PGAM5Q96HS1 289 aa18.7■□□□□ 0.58
ACTN1-220ENST00000556433 FAM71F1Q96KD3 344 aaPredicted RBP18.7■□□□□ 0.58
ACTN1-220ENST00000556433 CHID1Q9BWS9 393 aa18.7■□□□□ 0.58
ACTN1-220ENST00000556433 SLITRK2Q9H156 845 aa18.7■□□□□ 0.58
ACTN1-220ENST00000556433 PPP1R3EQ9H7J1 279 aa18.7■□□□□ 0.58
ACTN1-220ENST00000556433 ZNF319Q9P2F9 582 aa18.7■□□□□ 0.58
ACTN1-220ENST00000556433 KAAG1Q9UBP8 84 aa18.7■□□□□ 0.58
ACTN1-220ENST00000556433 PRPF19Q9UMS4 504 aaKnown RBP18.7■□□□□ 0.58
ACTN1-220ENST00000556433 CST1P01037 141 aa18.69■□□□□ 0.58
ACTN1-220ENST00000556433 T-ENOLP0DO92 83 aa18.69■□□□□ 0.58
ACTN1-220ENST00000556433 PAICSP22234 425 aaKnown RBP18.69■□□□□ 0.58
ACTN1-220ENST00000556433 POU1F1P28069 291 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms