RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 OR5T2Q8NGG2 359 aa11.33□□□□□ -0.6
ACTN1-219ENST00000556432 OR56B2PQ8NGI1 322 aa11.33□□□□□ -0.6
ACTN1-219ENST00000556432 OR9Q1Q8NGQ5 310 aa11.33□□□□□ -0.6
ACTN1-219ENST00000556432 SPTSSAQ969W0 71 aa11.33□□□□□ -0.6
ACTN1-219ENST00000556432 SEH1LQ96EE3 360 aa11.33□□□□□ -0.6
ACTN1-219ENST00000556432 ZNF799Q96GE5 643 aa11.33□□□□□ -0.6
ACTN1-219ENST00000556432 NSRP1Q9H0G5 558 aaKnown RBP11.33□□□□□ -0.6
ACTN1-219ENST00000556432 ZNF702PQ9H963 129 aa11.33□□□□□ -0.6
ACTN1-219ENST00000556432 ADA2Q9NZK5 511 aa11.33□□□□□ -0.6
ACTN1-219ENST00000556432 N6AMT1Q9Y5N5 214 aa11.33□□□□□ -0.6
ACTN1-219ENST00000556432 A0A087WUU8 490 aa11.32□□□□□ -0.6
ACTN1-219ENST00000556432 ADARB2-AS1A8MUL3 147 aa11.32□□□□□ -0.6
ACTN1-219ENST00000556432 E9PQ18 207 aa11.32□□□□□ -0.6
ACTN1-219ENST00000556432 M0R1W7 72 aa11.32□□□□□ -0.6
ACTN1-219ENST00000556432 IFNW1P05000 195 aa11.32□□□□□ -0.6
ACTN1-219ENST00000556432 FAHP16930 419 aa11.32□□□□□ -0.6
ACTN1-219ENST00000556432 NDUFB7P17568 137 aa11.32□□□□□ -0.6
ACTN1-219ENST00000556432 CDKN2AP42771 156 aaKnown RBP11.32□□□□□ -0.6
ACTN1-219ENST00000556432 CSNK2BP67870 215 aa11.32□□□□□ -0.6
ACTN1-219ENST00000556432 SLC35A2P78381 396 aa11.32□□□□□ -0.6
ACTN1-219ENST00000556432 SLC36A3Q495N2 470 aa11.32□□□□□ -0.6
ACTN1-219ENST00000556432 GLYATL3Q5SZD4 288 aa11.32□□□□□ -0.6
ACTN1-219ENST00000556432 NANOGP8Q6NSW7 305 aa11.32□□□□□ -0.6
ACTN1-219ENST00000556432 ERICH5Q6P6B1 374 aa11.32□□□□□ -0.6
ACTN1-219ENST00000556432 TMPRSS11FQ6ZWK6 438 aa11.32□□□□□ -0.6
ACTN1-219ENST00000556432 DPY19L4Q7Z388 723 aa11.32□□□□□ -0.6
ACTN1-219ENST00000556432 TSEN54Q7Z6J9 526 aaKnown RBP11.32□□□□□ -0.6
ACTN1-219ENST00000556432 C8orf46Q8TAG6 207 aa11.32□□□□□ -0.6
ACTN1-219ENST00000556432 FAM46AQ96IP4 442 aaKnown RBP11.32□□□□□ -0.6
ACTN1-219ENST00000556432 SH3GL1Q99961 368 aa11.32□□□□□ -0.6
ACTN1-219ENST00000556432 RNPEPL1Q9HAU8 725 aa11.32□□□□□ -0.6
ACTN1-219ENST00000556432 SRA1Q9HD15 236 aaKnown RBP11.32□□□□□ -0.6
ACTN1-219ENST00000556432 SNTG1Q9NSN8 517 aa11.32□□□□□ -0.6
ACTN1-219ENST00000556432 SERTAD4Q9NUC0 356 aa11.32□□□□□ -0.6
ACTN1-219ENST00000556432 TMEM5Q9Y2B1 443 aa11.32□□□□□ -0.6
ACTN1-219ENST00000556432 DNAH3Q8TD57 4116 aa11.32□□□□□ -0.6
ACTN1-219ENST00000556432 IGLV1-36A0A0B4J1U3 117 aa11.31□□□□□ -0.6
ACTN1-219ENST00000556432 ANKRD30BLA7E2S9 258 aa11.31□□□□□ -0.6
ACTN1-219ENST00000556432 DCTN6O00399 190 aa11.31□□□□□ -0.6
ACTN1-219ENST00000556432 PPP1R3DO95685 299 aa11.31□□□□□ -0.6
ACTN1-219ENST00000556432 TROVE2P10155 538 aaKnown RBP eCLIP11.31□□□□□ -0.6
ACTN1-219ENST00000556432 PAICSP22234 425 aaKnown RBP11.31□□□□□ -0.6
ACTN1-219ENST00000556432 NAA10P41227 235 aaPredicted RBP11.31□□□□□ -0.6
ACTN1-219ENST00000556432 RPS6KA3P51812 740 aa11.31□□□□□ -0.6
ACTN1-219ENST00000556432 RFX4Q33E94 735 aa11.31□□□□□ -0.6
ACTN1-219ENST00000556432 PLA1AQ53H76 456 aa11.31□□□□□ -0.6
ACTN1-219ENST00000556432 CRIP3Q6Q6R5 217 aa11.31□□□□□ -0.6
ACTN1-219ENST00000556432 SLC26A10Q8NG04 563 aa11.31□□□□□ -0.6
ACTN1-219ENST00000556432 OR5D13Q8NGL4 314 aa11.31□□□□□ -0.6
ACTN1-219ENST00000556432 C12orf43Q96C57 262 aaKnown RBP11.31□□□□□ -0.6
ACTN1-219ENST00000556432 DUS3LQ96G46 650 aaKnown RBP11.31□□□□□ -0.6
ACTN1-219ENST00000556432 B9D2Q9BPU9 175 aa11.31□□□□□ -0.6
ACTN1-219ENST00000556432 TMEM120AQ9BXJ8 343 aa11.31□□□□□ -0.6
ACTN1-219ENST00000556432 NRIP3Q9NQ35 241 aa11.31□□□□□ -0.6
ACTN1-219ENST00000556432 SLC25A10Q9UBX3 287 aaPredicted RBP11.31□□□□□ -0.6
ACTN1-219ENST00000556432 ZNF391Q9UJN7 358 aa11.31□□□□□ -0.6
ACTN1-219ENST00000556432 SNX13Q9Y5W8 968 aa11.31□□□□□ -0.6
ACTN1-219ENST00000556432 RENP00797 406 aa11.3□□□□□ -0.6
ACTN1-219ENST00000556432 KRTAP10-11P60412 298 aa11.3□□□□□ -0.6
ACTN1-219ENST00000556432 AANATQ16613 207 aa11.3□□□□□ -0.6
ACTN1-219ENST00000556432 WDR82Q6UXN9 313 aa11.3□□□□□ -0.6
ACTN1-219ENST00000556432 FAM185AQ8N0U4 392 aa11.3□□□□□ -0.6
ACTN1-219ENST00000556432 PAPD5Q8NDF8 572 aaKnown RBP11.3□□□□□ -0.6
ACTN1-219ENST00000556432 WFDC9Q8NEX5 89 aa11.3□□□□□ -0.6
ACTN1-219ENST00000556432 DDOQ99489 341 aa11.3□□□□□ -0.6
ACTN1-219ENST00000556432 MEGF9Q9H1U4 602 aa11.3□□□□□ -0.6
ACTN1-219ENST00000556432 PNRC2Q9NPJ4 139 aaKnown RBP11.3□□□□□ -0.6
ACTN1-219ENST00000556432 B9D1Q9UPM9 204 aa11.3□□□□□ -0.6
ACTN1-219ENST00000556432 TRBV23-1A0A0A0MS06 115 aa11.29□□□□□ -0.6
ACTN1-219ENST00000556432 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.29□□□□□ -0.6
ACTN1-219ENST00000556432 FFAR1O14842 300 aa11.29□□□□□ -0.6
ACTN1-219ENST00000556432 TFF1P04155 84 aa11.29□□□□□ -0.6
ACTN1-219ENST00000556432 HOXD3P31249 432 aaPredicted RBP11.29□□□□□ -0.6
ACTN1-219ENST00000556432 KDELR2P33947 212 aa11.29□□□□□ -0.6
ACTN1-219ENST00000556432 TGM4P49221 684 aa11.29□□□□□ -0.6
ACTN1-219ENST00000556432 SLC7A2P52569 658 aa11.29□□□□□ -0.6
ACTN1-219ENST00000556432 LGALS4P56470 323 aa11.29□□□□□ -0.6
ACTN1-219ENST00000556432 SELENOWP63302 87 aa11.29□□□□□ -0.6
ACTN1-219ENST00000556432 STUMQ69YW2 141 aa11.29□□□□□ -0.6
ACTN1-219ENST00000556432 DPY19L2P2Q6ZN68 376 aa11.29□□□□□ -0.6
ACTN1-219ENST00000556432 VTCN1Q7Z7D3 282 aa11.29□□□□□ -0.6
ACTN1-219ENST00000556432 CPLX4Q7Z7G2 160 aa11.29□□□□□ -0.6
ACTN1-219ENST00000556432 WDR86Q86TI4 376 aa11.29□□□□□ -0.6
ACTN1-219ENST00000556432 TMEM219Q86XT9 240 aa11.29□□□□□ -0.6
ACTN1-219ENST00000556432 OR6V1Q8N148 313 aa11.29□□□□□ -0.6
ACTN1-219ENST00000556432 OR1M1Q8NGA1 313 aa11.29□□□□□ -0.6
ACTN1-219ENST00000556432 DPF1Q92782 380 aa11.29□□□□□ -0.6
ACTN1-219ENST00000556432 MED30Q96HR3 178 aa11.29□□□□□ -0.6
ACTN1-219ENST00000556432 RCC1LQ96I51 464 aaKnown RBP11.29□□□□□ -0.6
ACTN1-219ENST00000556432 RSRC1Q96IZ7 334 aaKnown RBP11.29□□□□□ -0.6
ACTN1-219ENST00000556432 ERMAPQ96PL5 475 aaPredicted RBP11.29□□□□□ -0.6
ACTN1-219ENST00000556432 GPX7Q96SL4 187 aaPredicted RBP11.29□□□□□ -0.6
ACTN1-219ENST00000556432 COPS4Q9BT78 406 aa11.29□□□□□ -0.6
ACTN1-219ENST00000556432 PRSS22Q9GZN4 317 aa11.29□□□□□ -0.6
ACTN1-219ENST00000556432 OPA3Q9H6K4 179 aa11.29□□□□□ -0.6
ACTN1-219ENST00000556432 ELL3Q9HB65 397 aaPredicted RBP11.29□□□□□ -0.6
ACTN1-219ENST00000556432 RPRD1BQ9NQG5 326 aaKnown RBP11.29□□□□□ -0.6
ACTN1-219ENST00000556432 HAO2Q9NYQ3 351 aa11.29□□□□□ -0.6
ACTN1-219ENST00000556432 CYB5R1Q9UHQ9 305 aa11.29□□□□□ -0.6
ACTN1-219ENST00000556432 SIGLEC7Q9Y286 467 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms