RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 MRPL21Q7Z2W9 205 aaKnown RBP8.16□□□□□ -1.1
SRP54-210ENST00000556380 OR8B12Q8NGG6 310 aa8.16□□□□□ -1.1
SRP54-210ENST00000556380 SPRYD4Q8WW59 207 aaPredicted RBP8.16□□□□□ -1.1
SRP54-210ENST00000556380 NRG4Q8WWG1 115 aa8.16□□□□□ -1.1
SRP54-210ENST00000556380 PPP1R14AQ96A00 147 aa8.16□□□□□ -1.1
SRP54-210ENST00000556380 LGALS12Q96DT0 336 aa8.16□□□□□ -1.1
SRP54-210ENST00000556380 RNFT2Q96EX2 444 aa8.16□□□□□ -1.1
SRP54-210ENST00000556380 REEP6Q96HR9 211 aa8.16□□□□□ -1.1
SRP54-210ENST00000556380 PGAM5Q96HS1 289 aa8.16□□□□□ -1.1
SRP54-210ENST00000556380 LYZL4Q96KX0 146 aa8.16□□□□□ -1.1
SRP54-210ENST00000556380 ZNF649Q9BS31 505 aa8.16□□□□□ -1.1
SRP54-210ENST00000556380 PIMREGQ9BSJ6 248 aa8.16□□□□□ -1.1
SRP54-210ENST00000556380 SOX7Q9BT81 388 aa8.16□□□□□ -1.1
SRP54-210ENST00000556380 MROQ9BYG7 248 aa8.16□□□□□ -1.1
SRP54-210ENST00000556380 EGLN1Q9GZT9 426 aa8.16□□□□□ -1.1
SRP54-210ENST00000556380 OR10A2Q9H208 303 aa8.16□□□□□ -1.1
SRP54-210ENST00000556380 RGCCQ9H4X1 137 aa8.16□□□□□ -1.1
SRP54-210ENST00000556380 OPA3Q9H6K4 179 aa8.16□□□□□ -1.1
SRP54-210ENST00000556380 SAP30LQ9HAJ7 183 aa8.16□□□□□ -1.1
SRP54-210ENST00000556380 ZNF275Q9NSD4 429 aaPredicted RBP8.16□□□□□ -1.1
SRP54-210ENST00000556380 MRPL15Q9P015 296 aaKnown RBP8.16□□□□□ -1.1
SRP54-210ENST00000556380 IL19Q9UHD0 177 aa8.16□□□□□ -1.1
SRP54-210ENST00000556380 ABCA2Q9BZC7 2435 aa8.15□□□□□ -1.1
SRP54-210ENST00000556380 SVEP1Q4LDE5 3571 aa8.15□□□□□ -1.1
SRP54-210ENST00000556380 A0A0U1RQV5 110 aa8.15□□□□□ -1.1
SRP54-210ENST00000556380 TMEM269A0A1B0GVZ9 245 aa8.15□□□□□ -1.1
SRP54-210ENST00000556380 GGT3PA6NGU5 568 aa8.15□□□□□ -1.1
SRP54-210ENST00000556380 ZNF670-ZNF695F2Z2N8 137 aa8.15□□□□□ -1.1
SRP54-210ENST00000556380 WNT9BO14905 357 aa8.15□□□□□ -1.1
SRP54-210ENST00000556380 SULT1C4O75897 302 aa8.15□□□□□ -1.1
SRP54-210ENST00000556380 CLIC3O95833 236 aa8.15□□□□□ -1.1
SRP54-210ENST00000556380 HLA-DPB1P04440 258 aa8.15□□□□□ -1.1
SRP54-210ENST00000556380 CFL1P23528 166 aaKnown RBP8.15□□□□□ -1.1
SRP54-210ENST00000556380 ACKR3P25106 362 aa8.15□□□□□ -1.1
SRP54-210ENST00000556380 RBMXP38159 391 aaKnown RBP8.15□□□□□ -1.1
SRP54-210ENST00000556380 DDOSTP39656 456 aa8.15□□□□□ -1.1
SRP54-210ENST00000556380 PMELP40967 661 aa8.15□□□□□ -1.1
SRP54-210ENST00000556380 RIDAP52758 137 aaKnown RBP8.15□□□□□ -1.1
SRP54-210ENST00000556380 ZNF91Q05481 1191 aa8.15□□□□□ -1.1
SRP54-210ENST00000556380 MFGE8Q08431 387 aaPredicted RBP8.15□□□□□ -1.1
SRP54-210ENST00000556380 MAB21L1Q13394 359 aa8.15□□□□□ -1.1
SRP54-210ENST00000556380 OR8B8Q15620 311 aa8.15□□□□□ -1.1
SRP54-210ENST00000556380 TIGD6Q17RP2 521 aa8.15□□□□□ -1.1
SRP54-210ENST00000556380 TMEM249Q2WGJ8 235 aa8.15□□□□□ -1.1
SRP54-210ENST00000556380 TTC23Q5W5X9 447 aa8.15□□□□□ -1.1
SRP54-210ENST00000556380 BHLHE23Q8NDY6 225 aa8.15□□□□□ -1.1
SRP54-210ENST00000556380 ZNF555Q8NEP9 628 aa8.15□□□□□ -1.1
SRP54-210ENST00000556380 OR10AD1Q8NGE0 317 aa8.15□□□□□ -1.1
SRP54-210ENST00000556380 OR56B2PQ8NGI1 322 aa8.15□□□□□ -1.1
SRP54-210ENST00000556380 ITLN1Q8WWA0 313 aa8.15□□□□□ -1.1
SRP54-210ENST00000556380 C1orf159Q96HA4 380 aa8.15□□□□□ -1.1
SRP54-210ENST00000556380 MEGF10Q96KG7 1140 aa8.15□□□□□ -1.1
SRP54-210ENST00000556380 Q96MT0 163 aa8.15□□□□□ -1.1
SRP54-210ENST00000556380 OR2V2Q96R30 315 aa8.15□□□□□ -1.1
SRP54-210ENST00000556380 SIGLEC11Q96RL6 698 aa8.15□□□□□ -1.1
SRP54-210ENST00000556380 TTTY10Q9BZA0 68 aa8.15□□□□□ -1.1
SRP54-210ENST00000556380 PBOV1Q9GZY1 135 aa8.15□□□□□ -1.1
SRP54-210ENST00000556380 RNPEPL1Q9HAU8 725 aa8.15□□□□□ -1.1
SRP54-210ENST00000556380 GCM1Q9NP62 436 aa8.15□□□□□ -1.1
SRP54-210ENST00000556380 G6PC2Q9NQR9 355 aa8.15□□□□□ -1.1
SRP54-210ENST00000556380 DCAF16Q9NXF7 216 aa8.15□□□□□ -1.1
SRP54-210ENST00000556380 NUFIP1Q9UHK0 495 aaKnown RBP8.15□□□□□ -1.1
SRP54-210ENST00000556380 YLPM1P49750 1951 aaKnown RBP8.14□□□□□ -1.11
SRP54-210ENST00000556380 A0A1B0GTI1 187 aa8.14□□□□□ -1.11
SRP54-210ENST00000556380 LRP5LA4QPB2 252 aa8.14□□□□□ -1.11
SRP54-210ENST00000556380 METTL15A6NJ78 407 aa8.14□□□□□ -1.11
SRP54-210ENST00000556380 SNTNA6NMZ2 147 aa8.14□□□□□ -1.11
SRP54-210ENST00000556380 F5H5P2 479 aa8.14□□□□□ -1.11
SRP54-210ENST00000556380 H0YAE9 185 aa8.14□□□□□ -1.11
SRP54-210ENST00000556380 TPD52L2O43399 206 aaKnown RBP8.14□□□□□ -1.11
SRP54-210ENST00000556380 TBX1O43435 398 aa8.14□□□□□ -1.11
SRP54-210ENST00000556380 PPIHO43447 177 aaKnown RBP8.14□□□□□ -1.11
SRP54-210ENST00000556380 HEXAP06865 529 aa8.14□□□□□ -1.11
SRP54-210ENST00000556380 DBTP11182 482 aaKnown RBP8.14□□□□□ -1.11
SRP54-210ENST00000556380 CA6P23280 308 aa8.14□□□□□ -1.11
SRP54-210ENST00000556380 TNFSF4P23510 183 aa8.14□□□□□ -1.11
SRP54-210ENST00000556380 CD200P41217 278 aa8.14□□□□□ -1.11
SRP54-210ENST00000556380 GPR6P46095 362 aaPredicted RBP8.14□□□□□ -1.11
SRP54-210ENST00000556380 SMN1Q16637 294 aaKnown RBP8.14□□□□□ -1.11
SRP54-210ENST00000556380 HFEQ30201 348 aa8.14□□□□□ -1.11
SRP54-210ENST00000556380 LIPNQ5VXI9 398 aa8.14□□□□□ -1.11
SRP54-210ENST00000556380 LAIR2Q6ISS4 152 aa8.14□□□□□ -1.11
SRP54-210ENST00000556380 CLEC9AQ6UXN8 241 aa8.14□□□□□ -1.11
SRP54-210ENST00000556380 Q6ZSR3 168 aa8.14□□□□□ -1.11
SRP54-210ENST00000556380 KLBQ86Z14 1044 aa8.14□□□□□ -1.11
SRP54-210ENST00000556380 ELMOD2Q8IZ81 293 aa8.14□□□□□ -1.11
SRP54-210ENST00000556380 DHRSXQ8N5I4 330 aa8.14□□□□□ -1.11
SRP54-210ENST00000556380 CELF2-AS1Q8N7Q2 184 aa8.14□□□□□ -1.11
SRP54-210ENST00000556380 OR10H4Q8NGA5 316 aa8.14□□□□□ -1.11
SRP54-210ENST00000556380 FBLIM1Q8WUP2 373 aa8.14□□□□□ -1.11
SRP54-210ENST00000556380 CYGBQ8WWM9 190 aa8.14□□□□□ -1.11
SRP54-210ENST00000556380 CCL17Q92583 94 aa8.14□□□□□ -1.11
SRP54-210ENST00000556380 RORBQ92753 470 aa8.14□□□□□ -1.11
SRP54-210ENST00000556380 TFAP2CQ92754 450 aa8.14□□□□□ -1.11
SRP54-210ENST00000556380 ITFG2Q969R8 447 aa8.14□□□□□ -1.11
SRP54-210ENST00000556380 TBX5Q99593 518 aa8.14□□□□□ -1.11
SRP54-210ENST00000556380 ADI1Q9BV57 179 aa8.14□□□□□ -1.11
SRP54-210ENST00000556380 SLC22A4Q9H015 551 aa8.14□□□□□ -1.11
SRP54-210ENST00000556380 PPP1R3EQ9H7J1 279 aa8.14□□□□□ -1.11
SRP54-210ENST00000556380 AMBNQ9NP70 447 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms