RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 NDUFC2-KCTD14E9PQ53 114 aa1.51□□□□□ -2.17
SCFD1-218ENST00000556256 SCELO95171 688 aa1.51□□□□□ -2.17
SCFD1-218ENST00000556256 HLA-DQB1P01920 261 aa1.51□□□□□ -2.17
SCFD1-218ENST00000556256 KRT16P08779 473 aa1.51□□□□□ -2.17
SCFD1-218ENST00000556256 STAG3L3P0CL85 134 aa1.51□□□□□ -2.17
SCFD1-218ENST00000556256 GFAPP14136 432 aa1.51□□□□□ -2.17
SCFD1-218ENST00000556256 ZNF14P17017 642 aaPredicted RBP1.51□□□□□ -2.17
SCFD1-218ENST00000556256 RAB5AP20339 215 aa1.51□□□□□ -2.17
SCFD1-218ENST00000556256 TALDO1P37837 337 aa1.51□□□□□ -2.17
SCFD1-218ENST00000556256 RAB7AP51149 207 aa1.51□□□□□ -2.17
SCFD1-218ENST00000556256 TAS2R46P59540 309 aa1.51□□□□□ -2.17
SCFD1-218ENST00000556256 OR2B8PP59922 312 aa1.51□□□□□ -2.17
SCFD1-218ENST00000556256 RAB11AP62491 216 aa1.51□□□□□ -2.17
SCFD1-218ENST00000556256 DNAJC3Q13217 504 aa1.51□□□□□ -2.17
SCFD1-218ENST00000556256 RAB11BQ15907 218 aa1.51□□□□□ -2.17
SCFD1-218ENST00000556256 KLHL40Q2TBA0 621 aa1.51□□□□□ -2.17
SCFD1-218ENST00000556256 HIKESHIQ53FT3 197 aa1.51□□□□□ -2.17
SCFD1-218ENST00000556256 DNLZQ5SXM8 178 aa1.51□□□□□ -2.17
SCFD1-218ENST00000556256 FAM222AQ5U5X8 452 aa1.51□□□□□ -2.17
SCFD1-218ENST00000556256 PLCXD3Q63HM9 321 aa1.51□□□□□ -2.17
SCFD1-218ENST00000556256 RWDD4Q6NW29 188 aaKnown RBP1.51□□□□□ -2.17
SCFD1-218ENST00000556256 TMCO2Q7Z6W1 182 aaPredicted RBP1.51□□□□□ -2.17
SCFD1-218ENST00000556256 ZNF101Q8IZC7 436 aa1.51□□□□□ -2.17
SCFD1-218ENST00000556256 MYOCDQ8IZQ8 938 aa1.51□□□□□ -2.17
SCFD1-218ENST00000556256 SLC35G3Q8N808 338 aa1.51□□□□□ -2.17
SCFD1-218ENST00000556256 ST20-AS1Q8NBB2 130 aa1.51□□□□□ -2.17
SCFD1-218ENST00000556256 BBOF1Q8ND07 529 aa1.51□□□□□ -2.17
SCFD1-218ENST00000556256 OR1J4Q8NGS1 313 aa1.51□□□□□ -2.17
SCFD1-218ENST00000556256 RTN4IP1Q8WWV3 396 aaPredicted RBP1.51□□□□□ -2.17
SCFD1-218ENST00000556256 NAT6Q93015 286 aa1.51□□□□□ -2.17
SCFD1-218ENST00000556256 ISG20Q96AZ6 181 aaKnown RBP1.51□□□□□ -2.17
SCFD1-218ENST00000556256 ZNF707Q96C28 371 aaPredicted RBP1.51□□□□□ -2.17
SCFD1-218ENST00000556256 DYNLL2Q96FJ2 89 aa1.51□□□□□ -2.17
SCFD1-218ENST00000556256 TBL1YQ9BQ87 522 aa1.51□□□□□ -2.17
SCFD1-218ENST00000556256 CHCHD7Q9BUK0 85 aa1.51□□□□□ -2.17
SCFD1-218ENST00000556256 ZNF717Q9BY31 904 aaPredicted RBP1.51□□□□□ -2.17
SCFD1-218ENST00000556256 ULBP2Q9BZM5 246 aa1.51□□□□□ -2.17
SCFD1-218ENST00000556256 IQCGQ9H095 443 aaKnown RBP1.51□□□□□ -2.17
SCFD1-218ENST00000556256 PLEKHF2Q9H8W4 249 aa1.51□□□□□ -2.17
SCFD1-218ENST00000556256 CRLF2Q9HC73 371 aa1.51□□□□□ -2.17
SCFD1-218ENST00000556256 PXMP2Q9NR77 195 aa1.51□□□□□ -2.17
SCFD1-218ENST00000556256 TREX1Q9NSU2 369 aa1.51□□□□□ -2.17
SCFD1-218ENST00000556256 CBY1Q9Y3M2 126 aa1.51□□□□□ -2.17
SCFD1-218ENST00000556256 RHBDD3Q9Y3P4 386 aa1.51□□□□□ -2.17
SCFD1-218ENST00000556256 TUBGCP6Q96RT7 1819 aa1.5□□□□□ -2.17
SCFD1-218ENST00000556256 MROH7Q68CQ1 1323 aa1.5□□□□□ -2.17
SCFD1-218ENST00000556256 KIR2DS1A0A191URI9 304 aa1.5□□□□□ -2.17
SCFD1-218ENST00000556256 PLIN3O60664 434 aa1.5□□□□□ -2.17
SCFD1-218ENST00000556256 EIF1BO60739 113 aaKnown RBP1.5□□□□□ -2.17
SCFD1-218ENST00000556256 SERPINB7O75635 380 aa1.5□□□□□ -2.17
SCFD1-218ENST00000556256 PAHP00439 452 aa1.5□□□□□ -2.17
SCFD1-218ENST00000556256 IGLV2-8P01709 118 aa1.5□□□□□ -2.17
SCFD1-218ENST00000556256 MT-ND4P03905 459 aa1.5□□□□□ -2.17
SCFD1-218ENST00000556256 RALBP11234 206 aa1.5□□□□□ -2.17
SCFD1-218ENST00000556256 IL1RNP18510 177 aa1.5□□□□□ -2.17
SCFD1-218ENST00000556256 MYL9P24844 172 aa1.5□□□□□ -2.17
SCFD1-218ENST00000556256 EIF1P41567 113 aaKnown RBP1.5□□□□□ -2.17
SCFD1-218ENST00000556256 GPR1P46091 355 aa1.5□□□□□ -2.17
SCFD1-218ENST00000556256 PRLHRP49683 370 aa1.5□□□□□ -2.17
SCFD1-218ENST00000556256 DAOAP59103 153 aa1.5□□□□□ -2.17
SCFD1-218ENST00000556256 TAS2R39P59534 338 aa1.5□□□□□ -2.17
SCFD1-218ENST00000556256 CYP24A1Q07973 514 aa1.5□□□□□ -2.17
SCFD1-218ENST00000556256 TFDP2Q14188 446 aa1.5□□□□□ -2.17
SCFD1-218ENST00000556256 C5orf64Q2M2E5 130 aa1.5□□□□□ -2.17
SCFD1-218ENST00000556256 SLC25A35Q3KQZ1 300 aa1.5□□□□□ -2.17
SCFD1-218ENST00000556256 KPRPQ5T749 579 aaPredicted RBP1.5□□□□□ -2.17
SCFD1-218ENST00000556256 GUSBP11Q6P575 273 aa1.5□□□□□ -2.17
SCFD1-218ENST00000556256 UNC93AQ86WB7 457 aa1.5□□□□□ -2.17
SCFD1-218ENST00000556256 CMTM8Q8IZV2 173 aa1.5□□□□□ -2.17
SCFD1-218ENST00000556256 ZNF645Q8N7E2 425 aa1.5□□□□□ -2.17
SCFD1-218ENST00000556256 INO80EQ8NBZ0 244 aaPredicted RBP1.5□□□□□ -2.17
SCFD1-218ENST00000556256 OR5T1Q8NG75 326 aa1.5□□□□□ -2.17
SCFD1-218ENST00000556256 OR9A2Q8NGT5 310 aa1.5□□□□□ -2.17
SCFD1-218ENST00000556256 OR13G1Q8NGZ3 307 aa1.5□□□□□ -2.17
SCFD1-218ENST00000556256 RXFP4Q8TDU9 374 aa1.5□□□□□ -2.17
SCFD1-218ENST00000556256 APH1AQ96BI3 265 aa1.5□□□□□ -2.17
SCFD1-218ENST00000556256 RMI2Q96E14 147 aa1.5□□□□□ -2.17
SCFD1-218ENST00000556256 CSPG4P5Q96PW8 444 aa1.5□□□□□ -2.17
SCFD1-218ENST00000556256 SULT4A1Q9BR01 284 aa1.5□□□□□ -2.17
SCFD1-218ENST00000556256 OR2AG1Q9H205 316 aa1.5□□□□□ -2.17
SCFD1-218ENST00000556256 FBXO6Q9NRD1 293 aaPredicted RBP1.5□□□□□ -2.17
SCFD1-218ENST00000556256 RBFOX1Q9NWB1 397 aaKnown RBP1.5□□□□□ -2.17
SCFD1-218ENST00000556256 MCUBQ9NWR8 336 aa1.5□□□□□ -2.17
SCFD1-218ENST00000556256 ENOPH1Q9UHY7 261 aa1.5□□□□□ -2.17
SCFD1-218ENST00000556256 KIF26AQ9ULI4 1882 aaPredicted RBP1.5□□□□□ -2.17
SCFD1-218ENST00000556256 COL5A1P20908 1838 aaPredicted RBP1.5□□□□□ -2.17
SCFD1-218ENST00000556256 IGHV3-49A0A0A0MS15 119 aa1.49□□□□□ -2.17
SCFD1-218ENST00000556256 A0A0A6YYD5 115 aa1.49□□□□□ -2.17
SCFD1-218ENST00000556256 A0A0B4J2E0 115 aa1.49□□□□□ -2.17
SCFD1-218ENST00000556256 CCL15-CCL14A0A0B4J2E2 113 aa1.49□□□□□ -2.17
SCFD1-218ENST00000556256 IGHV1-3A0A0C4DH29 117 aa1.49□□□□□ -2.17
SCFD1-218ENST00000556256 K7EM74 188 aa1.49□□□□□ -2.17
SCFD1-218ENST00000556256 LGALS9O00182 355 aa1.49□□□□□ -2.17
SCFD1-218ENST00000556256 CDRT1O95170 752 aa1.49□□□□□ -2.17
SCFD1-218ENST00000556256 FARS2O95363 451 aaKnown RBP1.49□□□□□ -2.17
SCFD1-218ENST00000556256 CYB5R3P00387 301 aaPredicted RBP1.49□□□□□ -2.17
SCFD1-218ENST00000556256 TRBV12-3P01733 135 aa1.49□□□□□ -2.17
SCFD1-218ENST00000556256 CATP04040 527 aaKnown RBP1.49□□□□□ -2.17
SCFD1-218ENST00000556256 IL4P05112 153 aa1.49□□□□□ -2.17
SCFD1-218ENST00000556256 THRAP10827 490 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms