RNA–Protein interactions for RNA: ENST00000556210.1

CUX1-215, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-215ENST00000556210 ZNF354AO60765 605 aaPredicted RBP13.23□□□□□ -0.29
CUX1-215ENST00000556210 OR3A4PP47883 348 aa13.23□□□□□ -0.29
CUX1-215ENST00000556210 SSR4P51571 173 aa13.23□□□□□ -0.29
CUX1-215ENST00000556210 NAA40Q86UY6 237 aa13.23□□□□□ -0.29
CUX1-215ENST00000556210 MAFAQ8NHW3 353 aaPredicted RBP13.23□□□□□ -0.29
CUX1-215ENST00000556210 SOX7Q9BT81 388 aa13.23□□□□□ -0.29
CUX1-215ENST00000556210 RFPL4AA6NLU0 287 aa13.23□□□□□ -0.29
CUX1-215ENST00000556210 RFPL4AL1F8VTS6 287 aa13.23□□□□□ -0.29
CUX1-215ENST00000556210 SPRY1O43609 319 aaPredicted RBP13.23□□□□□ -0.29
CUX1-215ENST00000556210 EIF5AP63241 154 aaKnown RBP13.23□□□□□ -0.29
CUX1-215ENST00000556210 STPG1Q5TH74 334 aa13.23□□□□□ -0.29
CUX1-215ENST00000556210 AAED1Q7RTV5 226 aa13.23□□□□□ -0.29
CUX1-215ENST00000556210 HAVCR2Q8TDQ0 301 aa13.23□□□□□ -0.29
CUX1-215ENST00000556210 TMED6Q8WW62 240 aa13.23□□□□□ -0.29
CUX1-215ENST00000556210 ADIPOR1Q96A54 375 aa13.23□□□□□ -0.29
CUX1-215ENST00000556210 ADAT3Q96EY9 351 aaPredicted RBP13.23□□□□□ -0.29
CUX1-215ENST00000556210 ZNF700Q9H0M5 742 aa13.23□□□□□ -0.29
CUX1-215ENST00000556210 MEX3AA1L020 520 aaKnown RBP13.22□□□□□ -0.29
CUX1-215ENST00000556210 TPPPO94811 219 aa13.22□□□□□ -0.29
CUX1-215ENST00000556210 ATG12O94817 140 aa13.22□□□□□ -0.29
CUX1-215ENST00000556210 ZNF14P17017 642 aaPredicted RBP13.22□□□□□ -0.29
CUX1-215ENST00000556210 CNR1P21554 472 aa13.22□□□□□ -0.29
CUX1-215ENST00000556210 OMGP23515 440 aa13.22□□□□□ -0.29
CUX1-215ENST00000556210 SERPINF1P36955 418 aa13.22□□□□□ -0.29
CUX1-215ENST00000556210 CD96P40200 585 aa13.22□□□□□ -0.29
CUX1-215ENST00000556210 HERV-K104P61576 105 aa13.22□□□□□ -0.29
CUX1-215ENST00000556210 DHRS2Q13268 280 aa13.22□□□□□ -0.29
CUX1-215ENST00000556210 KRBOX4Q5JUW0 171 aa13.22□□□□□ -0.29
CUX1-215ENST00000556210 TMEM164Q5U3C3 297 aa13.22□□□□□ -0.29
CUX1-215ENST00000556210 MOB3CQ70IA8 216 aa13.22□□□□□ -0.29
CUX1-215ENST00000556210 SUMF1Q8NBK3 374 aa13.22□□□□□ -0.29
CUX1-215ENST00000556210 NAT6Q93015 286 aa13.22□□□□□ -0.29
CUX1-215ENST00000556210 B3GALT5Q9Y2C3 310 aa13.22□□□□□ -0.29
CUX1-215ENST00000556210 ZNF175Q9Y473 711 aa13.22□□□□□ -0.29
CUX1-215ENST00000556210 KCNMB2Q9Y691 235 aa13.22□□□□□ -0.29
CUX1-215ENST00000556210 FAM74A7A6NL05 159 aa13.22□□□□□ -0.29
CUX1-215ENST00000556210 NPIPB9F8W1W9 429 aa13.22□□□□□ -0.29
CUX1-215ENST00000556210 GPR31O00270 319 aa13.22□□□□□ -0.29
CUX1-215ENST00000556210 SGCEO43556 437 aa13.22□□□□□ -0.29
CUX1-215ENST00000556210 SNAPINO95295 136 aa13.22□□□□□ -0.29
CUX1-215ENST00000556210 RPA2P15927 270 aa13.22□□□□□ -0.29
CUX1-215ENST00000556210 FZD5Q13467 585 aa13.22□□□□□ -0.29
CUX1-215ENST00000556210 FAM74A3Q4VXF1 159 aa13.22□□□□□ -0.29
CUX1-215ENST00000556210 SLC16A14Q7RTX9 510 aa13.22□□□□□ -0.29
CUX1-215ENST00000556210 FAM122BQ7Z309 247 aa13.22□□□□□ -0.29
CUX1-215ENST00000556210 SPTSSAQ969W0 71 aa13.22□□□□□ -0.29
CUX1-215ENST00000556210 CMTM3Q96MX0 182 aa13.22□□□□□ -0.29
CUX1-215ENST00000556210 ACACAQ13085 2346 aa13.22□□□□□ -0.29
CUX1-215ENST00000556210 RAMP1O60894 148 aa13.22□□□□□ -0.29
CUX1-215ENST00000556210 PDGFBP01127 241 aaPredicted RBP13.22□□□□□ -0.29
CUX1-215ENST00000556210 CBR1P16152 277 aa13.22□□□□□ -0.29
CUX1-215ENST00000556210 DUSP1P28562 367 aa13.22□□□□□ -0.29
CUX1-215ENST00000556210 PPP1R1AQ13522 171 aa13.22□□□□□ -0.29
CUX1-215ENST00000556210 PLXDC2Q6UX71 529 aa13.22□□□□□ -0.29
CUX1-215ENST00000556210 ST8SIA1Q92185 356 aa13.22□□□□□ -0.29
CUX1-215ENST00000556210 ZNF501Q96CX3 271 aaPredicted RBP13.22□□□□□ -0.29
CUX1-215ENST00000556210 SPACA9Q96E40 222 aaPredicted RBP13.22□□□□□ -0.29
CUX1-215ENST00000556210 PCDHB10Q9UN67 800 aa13.22□□□□□ -0.29
CUX1-215ENST00000556210 WIF1Q9Y5W5 379 aa13.22□□□□□ -0.29
CUX1-215ENST00000556210 ICAM2P13598 275 aa13.21□□□□□ -0.29
CUX1-215ENST00000556210 CBX5P45973 191 aa13.21□□□□□ -0.29
CUX1-215ENST00000556210 H2BFSP57053 126 aa13.21□□□□□ -0.29
CUX1-215ENST00000556210 MEF2DQ14814 521 aa13.21□□□□□ -0.29
CUX1-215ENST00000556210 MISPQ8IVT2 679 aa13.21□□□□□ -0.29
CUX1-215ENST00000556210 KCNG3Q8TAE7 436 aa13.21□□□□□ -0.29
CUX1-215ENST00000556210 IL1F10Q8WWZ1 152 aa13.21□□□□□ -0.29
CUX1-215ENST00000556210 ARHGAP5-AS1Q96IT6 56 aa13.21□□□□□ -0.29
CUX1-215ENST00000556210 ZNF426Q9BUY5 554 aa13.21□□□□□ -0.29
CUX1-215ENST00000556210 FANCFQ9NPI8 374 aa13.21□□□□□ -0.29
CUX1-215ENST00000556210 SLC7A11Q9UPY5 501 aa13.21□□□□□ -0.29
CUX1-215ENST00000556210 J3QRE1 110 aa13.21□□□□□ -0.29
CUX1-215ENST00000556210 SOCS1O15524 211 aa13.21□□□□□ -0.29
CUX1-215ENST00000556210 AQP8O94778 261 aa13.21□□□□□ -0.29
CUX1-215ENST00000556210 GNRHRP30968 328 aa13.21□□□□□ -0.29
CUX1-215ENST00000556210 CARD18P57730 90 aa13.21□□□□□ -0.29
CUX1-215ENST00000556210 SP6Q3SY56 376 aa13.21□□□□□ -0.29
CUX1-215ENST00000556210 TCEAL6Q6IPX3 200 aa13.21□□□□□ -0.29
CUX1-215ENST00000556210 OR2W3Q7Z3T1 314 aa13.21□□□□□ -0.29
CUX1-215ENST00000556210 D2HGDHQ8N465 521 aa13.21□□□□□ -0.29
CUX1-215ENST00000556210 STK35Q8TDR2 534 aa13.21□□□□□ -0.29
CUX1-215ENST00000556210 TCEAL3Q969E4 200 aa13.21□□□□□ -0.29
CUX1-215ENST00000556210 MCHR2Q969V1 340 aa13.21□□□□□ -0.29
CUX1-215ENST00000556210 RASL10BQ96S79 203 aa13.21□□□□□ -0.29
CUX1-215ENST00000556210 OR10A2Q9H208 303 aa13.21□□□□□ -0.29
CUX1-215ENST00000556210 ZNF629Q9UEG4 869 aaPredicted RBP13.21□□□□□ -0.29
CUX1-215ENST00000556210 NXT1Q9UKK6 140 aaKnown RBP13.21□□□□□ -0.29
CUX1-215ENST00000556210 PCNX1Q96RV3 2341 aa13.21□□□□□ -0.3
CUX1-215ENST00000556210 ADAP1O75689 374 aa13.21□□□□□ -0.3
CUX1-215ENST00000556210 NR2C1P13056 603 aa13.21□□□□□ -0.3
CUX1-215ENST00000556210 NAGAP17050 411 aa13.21□□□□□ -0.3
CUX1-215ENST00000556210 ZNF660Q6AZW8 331 aaPredicted RBP13.21□□□□□ -0.3
CUX1-215ENST00000556210 ATRAIDQ6UW56 229 aa13.21□□□□□ -0.3
CUX1-215ENST00000556210 FGF11Q92914 225 aa13.21□□□□□ -0.3
CUX1-215ENST00000556210 NPDC1Q9NQX5 325 aaPredicted RBP13.21□□□□□ -0.3
CUX1-215ENST00000556210 MED19A0JLT2 244 aaPredicted RBP13.2□□□□□ -0.3
CUX1-215ENST00000556210 OR2F2O95006 317 aa13.2□□□□□ -0.3
CUX1-215ENST00000556210 CCL2P13500 99 aa13.2□□□□□ -0.3
CUX1-215ENST00000556210 GLULP15104 373 aa13.2□□□□□ -0.3
CUX1-215ENST00000556210 KLK2P20151 261 aa13.2□□□□□ -0.3
CUX1-215ENST00000556210 NME2P22392 152 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms