RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 RAD51Q06609 339 aa2.53□□□□□ -2
SRP54-209ENST00000555746 BST2Q10589 180 aaKnown RBP2.53□□□□□ -2
SRP54-209ENST00000555746 STX4Q12846 297 aa2.53□□□□□ -2
SRP54-209ENST00000555746 PDIA2Q13087 525 aaKnown RBP2.53□□□□□ -2
SRP54-209ENST00000555746 SERTAD2Q14140 314 aa2.53□□□□□ -2
SRP54-209ENST00000555746 CRMP1Q14194 572 aa2.53□□□□□ -2
SRP54-209ENST00000555746 ELAVL3Q14576 367 aaKnown RBP2.53□□□□□ -2
SRP54-209ENST00000555746 ITIH4Q14624 930 aa2.53□□□□□ -2
SRP54-209ENST00000555746 CYTH1Q15438 398 aa2.53□□□□□ -2
SRP54-209ENST00000555746 ZIC1Q15915 447 aa2.53□□□□□ -2
SRP54-209ENST00000555746 MICBQ29980 383 aa2.53□□□□□ -2
SRP54-209ENST00000555746 QRICH1Q2TAL8 776 aa2.53□□□□□ -2
SRP54-209ENST00000555746 COX19Q49B96 90 aa2.53□□□□□ -2
SRP54-209ENST00000555746 PAN3Q58A45 887 aaKnown RBP2.53□□□□□ -2
SRP54-209ENST00000555746 C6orf226Q5I0X4 101 aa2.53□□□□□ -2
SRP54-209ENST00000555746 UTF1Q5T230 341 aa2.53□□□□□ -2
SRP54-209ENST00000555746 DMKNQ6E0U4 476 aaPredicted RBP2.53□□□□□ -2
SRP54-209ENST00000555746 ULK3Q6PHR2 472 aa2.53□□□□□ -2
SRP54-209ENST00000555746 KCNIP4Q6PIL6 250 aa2.53□□□□□ -2
SRP54-209ENST00000555746 C5orf46Q6UWT4 87 aa2.53□□□□□ -2
SRP54-209ENST00000555746 CD300LGQ6UXG3 332 aa2.53□□□□□ -2
SRP54-209ENST00000555746 HSDL2Q6YN16 418 aa2.53□□□□□ -2
SRP54-209ENST00000555746 MRPL21Q7Z2W9 205 aaKnown RBP2.53□□□□□ -2
SRP54-209ENST00000555746 TSEN54Q7Z6J9 526 aaKnown RBP2.53□□□□□ -2
SRP54-209ENST00000555746 NT5DC3Q86UY8 548 aa2.53□□□□□ -2
SRP54-209ENST00000555746 HPS6Q86YV9 775 aa2.53□□□□□ -2
SRP54-209ENST00000555746 BOD1L2Q8IYS8 172 aa2.53□□□□□ -2
SRP54-209ENST00000555746 LINC00612Q8N6U2 182 aa2.53□□□□□ -2
SRP54-209ENST00000555746 ATP6V0D2Q8N8Y2 350 aa2.53□□□□□ -2
SRP54-209ENST00000555746 CCDC71LQ8N9Z2 235 aa2.53□□□□□ -2
SRP54-209ENST00000555746 CATSPER1Q8NEC5 780 aa2.53□□□□□ -2
SRP54-209ENST00000555746 NFAM1Q8NET5 270 aaPredicted RBP2.53□□□□□ -2
SRP54-209ENST00000555746 OR9G4Q8NGQ1 327 aa2.53□□□□□ -2
SRP54-209ENST00000555746 OR10J5Q8NHC4 309 aa2.53□□□□□ -2
SRP54-209ENST00000555746 NANPQ8TBE9 248 aa2.53□□□□□ -2
SRP54-209ENST00000555746 PIH1D2Q8WWB5 315 aa2.53□□□□□ -2
SRP54-209ENST00000555746 RASSF5Q8WWW0 418 aa2.53□□□□□ -2
SRP54-209ENST00000555746 ACOT11Q8WXI4 607 aaPredicted RBP2.53□□□□□ -2
SRP54-209ENST00000555746 ST8SIA1Q92185 356 aa2.53□□□□□ -2
SRP54-209ENST00000555746 PIGCQ92535 297 aa2.53□□□□□ -2
SRP54-209ENST00000555746 NRGNQ92686 78 aa2.53□□□□□ -2
SRP54-209ENST00000555746 HGDQ93099 445 aa2.53□□□□□ -2
SRP54-209ENST00000555746 FAM131CQ96AQ9 280 aa2.53□□□□□ -2
SRP54-209ENST00000555746 DGCR14Q96DF8 476 aaKnown RBP2.53□□□□□ -2
SRP54-209ENST00000555746 CELF6Q96J87 481 aaKnown RBP2.53□□□□□ -2
SRP54-209ENST00000555746 RILPQ96NA2 401 aa2.53□□□□□ -2
SRP54-209ENST00000555746 ZNF285Q96NJ3 590 aa2.53□□□□□ -2
SRP54-209ENST00000555746 TSSK3Q96PN8 268 aa2.53□□□□□ -2
SRP54-209ENST00000555746 QKIQ96PU8 341 aaKnown RBP eCLIP2.53□□□□□ -24e-9■■■■■ 35.8
SRP54-209ENST00000555746 P2RY13Q9BPV8 354 aa2.53□□□□□ -2
SRP54-209ENST00000555746 SEC22CQ9BRL7 303 aa2.53□□□□□ -2
SRP54-209ENST00000555746 TIPINQ9BVW5 301 aa2.53□□□□□ -2
SRP54-209ENST00000555746 WDR54Q9H977 334 aa2.53□□□□□ -2
SRP54-209ENST00000555746 ELOVL3Q9HB03 270 aa2.53□□□□□ -2
SRP54-209ENST00000555746 PLGRKTQ9HBL7 147 aa2.53□□□□□ -2
SRP54-209ENST00000555746 CUTCQ9NTM9 273 aa2.53□□□□□ -2
SRP54-209ENST00000555746 DCAF13Q9NV06 445 aaKnown RBP2.53□□□□□ -2
SRP54-209ENST00000555746 KLRF1Q9NZS2 232 aa2.53□□□□□ -2
SRP54-209ENST00000555746 P2RX2Q9UBL9 471 aa2.53□□□□□ -2
SRP54-209ENST00000555746 ZNF107Q9UII5 783 aaPredicted RBP2.53□□□□□ -2
SRP54-209ENST00000555746 NTNG1Q9Y2I2 539 aa2.53□□□□□ -2
SRP54-209ENST00000555746 MMACHCQ9Y4U1 282 aa2.53□□□□□ -2
SRP54-209ENST00000555746 POLR3HQ9Y535 204 aaPredicted RBP2.53□□□□□ -2
SRP54-209ENST00000555746 PPIAL4AQ9Y536 164 aa2.53□□□□□ -2
SRP54-209ENST00000555746 HEY1Q9Y5J3 304 aa2.53□□□□□ -2
SRP54-209ENST00000555746 MYH10P35580 1976 aa2.52□□□□□ -2.01
SRP54-209ENST00000555746 HIVEP2P31629 2446 aa2.52□□□□□ -2.01
SRP54-209ENST00000555746 A0A1B0GTI1 187 aa2.52□□□□□ -2.01
SRP54-209ENST00000555746 A0A1B0GV72 72 aa2.52□□□□□ -2.01
SRP54-209ENST00000555746 PVALEFA0A1B0GWK0 134 aa2.52□□□□□ -2.01
SRP54-209ENST00000555746 SAGE2PA6NJ88 616 aa2.52□□□□□ -2.01
SRP54-209ENST00000555746 FAM220BPB1ANY3 271 aa2.52□□□□□ -2.01
SRP54-209ENST00000555746 E7EWF7 191 aa2.52□□□□□ -2.01
SRP54-209ENST00000555746 C11orf98E9PRG8 122 aa2.52□□□□□ -2.01
SRP54-209ENST00000555746 H3BMH7 237 aa2.52□□□□□ -2.01
SRP54-209ENST00000555746 H7C0C1 242 aa2.52□□□□□ -2.01
SRP54-209ENST00000555746 M0R036 132 aa2.52□□□□□ -2.01
SRP54-209ENST00000555746 KPNA3O00505 521 aaPredicted RBP2.52□□□□□ -2.01
SRP54-209ENST00000555746 DLGAP1O14490 977 aa2.52□□□□□ -2.01
SRP54-209ENST00000555746 SDHDO14521 159 aa2.52□□□□□ -2.01
SRP54-209ENST00000555746 RFXANKO14593 260 aa2.52□□□□□ -2.01
SRP54-209ENST00000555746 TM9SF1O15321 606 aa2.52□□□□□ -2.01
SRP54-209ENST00000555746 SLC31A2O15432 143 aa2.52□□□□□ -2.01
SRP54-209ENST00000555746 ZSCAN12O43309 604 aa2.52□□□□□ -2.01
SRP54-209ENST00000555746 AQP9O43315 295 aa2.52□□□□□ -2.01
SRP54-209ENST00000555746 SNAI2O43623 268 aa2.52□□□□□ -2.01
SRP54-209ENST00000555746 DPM1O60762 260 aa2.52□□□□□ -2.01
SRP54-209ENST00000555746 RAMP1O60894 148 aa2.52□□□□□ -2.01
SRP54-209ENST00000555746 GATBO75879 557 aaKnown RBP2.52□□□□□ -2.01
SRP54-209ENST00000555746 PSMG1O95456 288 aa2.52□□□□□ -2.01
SRP54-209ENST00000555746 CST1P01037 141 aa2.52□□□□□ -2.01
SRP54-209ENST00000555746 IFNA5P01569 189 aa2.52□□□□□ -2.01
SRP54-209ENST00000555746 FGGP02679 453 aa2.52□□□□□ -2.01
SRP54-209ENST00000555746 SERPINE2P07093 398 aa2.52□□□□□ -2.01
SRP54-209ENST00000555746 GUSBP08236 651 aa2.52□□□□□ -2.01
SRP54-209ENST00000555746 TCP1P17987 556 aaKnown RBP2.52□□□□□ -2.01
SRP54-209ENST00000555746 PGAM1P18669 254 aa2.52□□□□□ -2.01
SRP54-209ENST00000555746 TSPAN8P19075 237 aa2.52□□□□□ -2.01
SRP54-209ENST00000555746 ZP3P21754 424 aa2.52□□□□□ -2.01
SRP54-209ENST00000555746 F8A1P23610 371 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms