RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 WNK2Q9Y3S1 2297 aa17.19■□□□□ 0.34
VTI1B-205ENST00000555543 A0A0G2JMP0 313 aa17.18■□□□□ 0.34
VTI1B-205ENST00000555543 A0A0X1KG70 313 aa17.18■□□□□ 0.34
VTI1B-205ENST00000555543 LRRC30A6NM36 301 aa17.18■□□□□ 0.34
VTI1B-205ENST00000555543 THBS2P35442 1172 aa17.18■□□□□ 0.34
VTI1B-205ENST00000555543 DDOSTP39656 456 aa17.18■□□□□ 0.34
VTI1B-205ENST00000555543 DCAF12L2Q5VW00 463 aa17.18■□□□□ 0.34
VTI1B-205ENST00000555543 C1orf87Q8N0U7 546 aa17.18■□□□□ 0.34
VTI1B-205ENST00000555543 C19orf18Q8NEA5 215 aa17.18■□□□□ 0.34
VTI1B-205ENST00000555543 OR4M2Q8NGB6 313 aa17.18■□□□□ 0.34
VTI1B-205ENST00000555543 ERGIC1Q969X5 290 aa17.18■□□□□ 0.34
VTI1B-205ENST00000555543 TMEM246Q9BRR3 403 aa17.18■□□□□ 0.34
VTI1B-205ENST00000555543 NIPAL2Q9H841 368 aa17.18■□□□□ 0.34
VTI1B-205ENST00000555543 ADGRL4Q9HBW9 690 aa17.18■□□□□ 0.34
VTI1B-205ENST00000555543 LOC105371242A0A075B767 164 aa17.17■□□□□ 0.34
VTI1B-205ENST00000555543 SLC22A31A6NKX4 558 aa17.17■□□□□ 0.34
VTI1B-205ENST00000555543 ANKRD30BLA7E2S9 258 aa17.17■□□□□ 0.34
VTI1B-205ENST00000555543 CFL1P23528 166 aaKnown RBP17.17■□□□□ 0.34
VTI1B-205ENST00000555543 ACKR3P25106 362 aa17.17■□□□□ 0.34
VTI1B-205ENST00000555543 OR8B8Q15620 311 aa17.17■□□□□ 0.34
VTI1B-205ENST00000555543 ZNF404Q494X3 552 aa17.17■□□□□ 0.34
VTI1B-205ENST00000555543 ZFP1Q6P2D0 407 aa17.17■□□□□ 0.34
VTI1B-205ENST00000555543 WDR86Q86TI4 376 aa17.17■□□□□ 0.34
VTI1B-205ENST00000555543 KLBQ86Z14 1044 aa17.17■□□□□ 0.34
VTI1B-205ENST00000555543 OR11L1Q8NGX0 322 aa17.17■□□□□ 0.34
VTI1B-205ENST00000555543 OR8B4Q96RC9 309 aa17.17■□□□□ 0.34
VTI1B-205ENST00000555543 RBM4BQ9BQ04 359 aaKnown RBP17.17■□□□□ 0.34
VTI1B-205ENST00000555543 RGCCQ9H4X1 137 aa17.17■□□□□ 0.34
VTI1B-205ENST00000555543 METTL17Q9H7H0 456 aaPredicted RBP17.17■□□□□ 0.34
VTI1B-205ENST00000555543 FN3KRPQ9HA64 309 aa17.17■□□□□ 0.34
VTI1B-205ENST00000555543 MMP26Q9NRE1 261 aa17.17■□□□□ 0.34
VTI1B-205ENST00000555543 FAM206AQ9NX38 181 aa17.17■□□□□ 0.34
VTI1B-205ENST00000555543 RHBDD3Q9Y3P4 386 aa17.17■□□□□ 0.34
VTI1B-205ENST00000555543 PPIAL4EA0A075B759 164 aa17.16■□□□□ 0.34
VTI1B-205ENST00000555543 A8MXK9 166 aa17.16■□□□□ 0.34
VTI1B-205ENST00000555543 PPIAL4DF5H284 164 aa17.16■□□□□ 0.34
VTI1B-205ENST00000555543 EI24O14681 340 aa17.16■□□□□ 0.34
VTI1B-205ENST00000555543 FOXH1O75593 365 aa17.16■□□□□ 0.34
VTI1B-205ENST00000555543 FSTL3O95633 263 aa17.16■□□□□ 0.34
VTI1B-205ENST00000555543 ALPLP05186 524 aa17.16■□□□□ 0.34
VTI1B-205ENST00000555543 GRPP07492 148 aa17.16■□□□□ 0.34
VTI1B-205ENST00000555543 WNT2P09544 360 aa17.16■□□□□ 0.34
VTI1B-205ENST00000555543 PPIAL4FP0DN26 164 aa17.16■□□□□ 0.34
VTI1B-205ENST00000555543 IRF2P14316 349 aa17.16■□□□□ 0.34
VTI1B-205ENST00000555543 ROM1Q03395 351 aa17.16■□□□□ 0.34
VTI1B-205ENST00000555543 KCTD18Q6PI47 426 aaPredicted RBP17.16■□□□□ 0.34
VTI1B-205ENST00000555543 DEGS2Q6QHC5 323 aa17.16■□□□□ 0.34
VTI1B-205ENST00000555543 ZNF826PQ6ZT77 177 aa17.16■□□□□ 0.34
VTI1B-205ENST00000555543 GID4Q8IVV7 300 aa17.16■□□□□ 0.34
VTI1B-205ENST00000555543 SLC35F2Q8IXU6 374 aa17.16■□□□□ 0.34
VTI1B-205ENST00000555543 H2AFY2Q9P0M6 372 aaPredicted RBP17.16■□□□□ 0.34
VTI1B-205ENST00000555543 OPN4Q9UHM6 478 aa17.16■□□□□ 0.34
VTI1B-205ENST00000555543 PPIAL4AQ9Y536 164 aa17.16■□□□□ 0.34
VTI1B-205ENST00000555543 STAB1Q9NY15 2570 aa17.16■□□□□ 0.34
VTI1B-205ENST00000555543 TRAPPC2LH3BP13 241 aa17.15■□□□□ 0.34
VTI1B-205ENST00000555543 MAGEB4O15481 346 aaPredicted RBP17.15■□□□□ 0.34
VTI1B-205ENST00000555543 RPS2P15880 293 aaKnown RBP17.15■□□□□ 0.34
VTI1B-205ENST00000555543 ADRA2CP18825 462 aa17.15■□□□□ 0.34
VTI1B-205ENST00000555543 ZNF679Q8IYX0 411 aa17.15■□□□□ 0.34
VTI1B-205ENST00000555543 SPERTQ8NA61 448 aa17.15■□□□□ 0.34
VTI1B-205ENST00000555543 PLPP7Q8NBV4 271 aa17.15■□□□□ 0.34
VTI1B-205ENST00000555543 OR8S1Q8NH09 359 aa17.15■□□□□ 0.34
VTI1B-205ENST00000555543 ASB17Q8WXJ9 295 aa17.15■□□□□ 0.34
VTI1B-205ENST00000555543 PAPOLGQ9BWT3 736 aaKnown RBP17.15■□□□□ 0.34
VTI1B-205ENST00000555543 MROQ9BYG7 248 aa17.15■□□□□ 0.34
VTI1B-205ENST00000555543 C1orf123Q9NWV4 160 aa17.15■□□□□ 0.34
VTI1B-205ENST00000555543 RNF7Q9UBF6 113 aa17.15■□□□□ 0.34
VTI1B-205ENST00000555543 POLR3KQ9Y2Y1 108 aaPredicted RBP17.15■□□□□ 0.34
VTI1B-205ENST00000555543 TMEM14AQ9Y6G1 99 aa17.15■□□□□ 0.34
VTI1B-205ENST00000555543 PPIAL4CA0A0B4J2A2 164 aa17.14■□□□□ 0.33
VTI1B-205ENST00000555543 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.14■□□□□ 0.33
VTI1B-205ENST00000555543 TMEM269A0A1B0GVZ9 245 aa17.14■□□□□ 0.33
VTI1B-205ENST00000555543 RNF212BA8MTL3 300 aa17.14■□□□□ 0.33
VTI1B-205ENST00000555543 J3QLI3 93 aa17.14■□□□□ 0.33
VTI1B-205ENST00000555543 GATA3P23771 443 aa17.14■□□□□ 0.33
VTI1B-205ENST00000555543 CD80P33681 288 aa17.14■□□□□ 0.33
VTI1B-205ENST00000555543 CXCR4P61073 352 aa17.14■□□□□ 0.33
VTI1B-205ENST00000555543 MFGE8Q08431 387 aaPredicted RBP17.14■□□□□ 0.33
VTI1B-205ENST00000555543 ESCO2Q56NI9 601 aa17.14■□□□□ 0.33
VTI1B-205ENST00000555543 LYPD2Q6UXB3 125 aa17.14■□□□□ 0.33
VTI1B-205ENST00000555543 BOLLQ8N9W6 283 aaKnown RBP17.14■□□□□ 0.33
VTI1B-205ENST00000555543 DEFB108BQ8NET1 73 aa17.14■□□□□ 0.33
VTI1B-205ENST00000555543 CSNK2A3Q8NEV1 391 aa17.14■□□□□ 0.33
VTI1B-205ENST00000555543 OR51G2Q8NGK0 314 aa17.14■□□□□ 0.33
VTI1B-205ENST00000555543 APOL4Q9BPW4 351 aa17.14■□□□□ 0.33
VTI1B-205ENST00000555543 C14orf119Q9NWQ9 140 aa17.14■□□□□ 0.33
VTI1B-205ENST00000555543 HAO2Q9NYQ3 351 aa17.14■□□□□ 0.33
VTI1B-205ENST00000555543 USE1Q9NZ43 259 aa17.14■□□□□ 0.33
VTI1B-205ENST00000555543 IKZF2Q9UKS7 526 aa17.14■□□□□ 0.33
VTI1B-205ENST00000555543 LRCH1Q9Y2L9 728 aa17.14■□□□□ 0.33
VTI1B-205ENST00000555543 A6NLC8 198 aa17.13■□□□□ 0.33
VTI1B-205ENST00000555543 ZNF254O75437 659 aa17.13■□□□□ 0.33
VTI1B-205ENST00000555543 SRSF10O75494 262 aaKnown RBP17.13■□□□□ 0.33
VTI1B-205ENST00000555543 APOL3O95236 402 aa17.13■□□□□ 0.33
VTI1B-205ENST00000555543 CSNK2BP67870 215 aa17.13■□□□□ 0.33
VTI1B-205ENST00000555543 KRTAP24-1Q3LI83 254 aa17.13■□□□□ 0.33
VTI1B-205ENST00000555543 SFRP4Q6FHJ7 346 aaPredicted RBP17.13■□□□□ 0.33
VTI1B-205ENST00000555543 ZNF322Q6U7Q0 402 aaPredicted RBP17.13■□□□□ 0.33
VTI1B-205ENST00000555543 PLEKHG7Q6ZR37 379 aa17.13■□□□□ 0.33
VTI1B-205ENST00000555543 SSX6Q7RTT6 188 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms