RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 SYCNQ0VAF6 134 aa3.34□□□□□ -1.87
VRK1-205ENST00000555402 RBMY1FQ15415 496 aaKnown RBP3.34□□□□□ -1.87
VRK1-205ENST00000555402 TFDP3Q5H9I0 405 aa3.34□□□□□ -1.87
VRK1-205ENST00000555402 TMEM205Q6UW68 189 aa3.34□□□□□ -1.87
VRK1-205ENST00000555402 NDUFAF7Q7L592 441 aa3.34□□□□□ -1.87
VRK1-205ENST00000555402 OR2L8Q8NGY9 312 aa3.34□□□□□ -1.87
VRK1-205ENST00000555402 OR8U1Q8NH10 309 aa3.34□□□□□ -1.87
VRK1-205ENST00000555402 TCP10LQ8TDR4 215 aa3.34□□□□□ -1.87
VRK1-205ENST00000555402 FLYWCH2Q96CP2 140 aaKnown RBP3.34□□□□□ -1.87
VRK1-205ENST00000555402 HAUS1Q96CS2 278 aa3.34□□□□□ -1.87
VRK1-205ENST00000555402 RCN3Q96D15 328 aa3.34□□□□□ -1.87
VRK1-205ENST00000555402 TMEM175Q9BSA9 504 aa3.34□□□□□ -1.87
VRK1-205ENST00000555402 RGS18Q9NS28 235 aa3.34□□□□□ -1.87
VRK1-205ENST00000555402 ZNF355PQ9NSJ1 428 aa3.34□□□□□ -1.87
VRK1-205ENST00000555402 SLC17A7Q9P2U7 560 aa3.34□□□□□ -1.87
VRK1-205ENST00000555402 TMEM14AQ9Y6G1 99 aa3.34□□□□□ -1.87
VRK1-205ENST00000555402 PCDH11XQ9BZA7 1347 aa3.34□□□□□ -1.87
VRK1-205ENST00000555402 IGKV2D-24A0A075B6R9 120 aa3.33□□□□□ -1.88
VRK1-205ENST00000555402 DNASE2O00115 360 aaPredicted RBP3.33□□□□□ -1.88
VRK1-205ENST00000555402 SLC16A7O60669 478 aa3.33□□□□□ -1.88
VRK1-205ENST00000555402 SLC19A2O60779 497 aa3.33□□□□□ -1.88
VRK1-205ENST00000555402 SLC22A5O76082 557 aa3.33□□□□□ -1.88
VRK1-205ENST00000555402 VAMP5O95183 116 aa3.33□□□□□ -1.88
VRK1-205ENST00000555402 OXTP01178 125 aa3.33□□□□□ -1.88
VRK1-205ENST00000555402 CATP04040 527 aaKnown RBP3.33□□□□□ -1.88
VRK1-205ENST00000555402 OR8U9P0C7N5 309 aa3.33□□□□□ -1.88
VRK1-205ENST00000555402 CCNOP22674 350 aa3.33□□□□□ -1.88
VRK1-205ENST00000555402 PPICP45877 212 aa3.33□□□□□ -1.88
VRK1-205ENST00000555402 PLTPP55058 493 aa3.33□□□□□ -1.88
VRK1-205ENST00000555402 CLDN6P56747 220 aa3.33□□□□□ -1.88
VRK1-205ENST00000555402 CYP24A1Q07973 514 aa3.33□□□□□ -1.88
VRK1-205ENST00000555402 USF2Q15853 346 aaPredicted RBP3.33□□□□□ -1.88
VRK1-205ENST00000555402 C5orf64Q2M2E5 130 aa3.33□□□□□ -1.88
VRK1-205ENST00000555402 FBXW9Q5XUX1 488 aa3.33□□□□□ -1.88
VRK1-205ENST00000555402 WDFY1Q8IWB7 410 aa3.33□□□□□ -1.88
VRK1-205ENST00000555402 UBAC2Q8NBM4 344 aa3.33□□□□□ -1.88
VRK1-205ENST00000555402 FBXO36Q8NEA4 188 aa3.33□□□□□ -1.88
VRK1-205ENST00000555402 OR51L1Q8NGJ5 315 aa3.33□□□□□ -1.88
VRK1-205ENST00000555402 OR10G6Q8NH81 332 aa3.33□□□□□ -1.88
VRK1-205ENST00000555402 C17orf50Q8WW18 174 aa3.33□□□□□ -1.88
VRK1-205ENST00000555402 CYTH2Q99418 400 aa3.33□□□□□ -1.88
VRK1-205ENST00000555402 WFDC1Q9HC57 220 aa3.33□□□□□ -1.88
VRK1-205ENST00000555402 FLVCR2Q9UPI3 526 aa3.33□□□□□ -1.88
VRK1-205ENST00000555402 UBIAD1Q9Y5Z9 338 aa3.33□□□□□ -1.88
VRK1-205ENST00000555402 KPTNQ9Y664 436 aa3.33□□□□□ -1.88
VRK1-205ENST00000555402 ADAMTS13Q76LX8 1427 aa3.33□□□□□ -1.88
VRK1-205ENST00000555402 IGKV1-8A0A0C4DH67 115 aa3.32□□□□□ -1.88
VRK1-205ENST00000555402 TMEM223A0PJW6 202 aa3.32□□□□□ -1.88
VRK1-205ENST00000555402 RAB19A4D1S5 217 aa3.32□□□□□ -1.88
VRK1-205ENST00000555402 HACD1B0YJ81 288 aa3.32□□□□□ -1.88
VRK1-205ENST00000555402 H3BN98 237 aa3.32□□□□□ -1.88
VRK1-205ENST00000555402 KDELR3O43731 214 aa3.32□□□□□ -1.88
VRK1-205ENST00000555402 NIPSNAP2O75323 286 aa3.32□□□□□ -1.88
VRK1-205ENST00000555402 GCM2O75603 506 aaPredicted RBP3.32□□□□□ -1.88
VRK1-205ENST00000555402 REM1O75628 298 aa3.32□□□□□ -1.88
VRK1-205ENST00000555402 YIF1AO95070 293 aa3.32□□□□□ -1.88
VRK1-205ENST00000555402 ADRA2AP08913 450 aa3.32□□□□□ -1.88
VRK1-205ENST00000555402 CFHR2P36980 270 aa3.32□□□□□ -1.88
VRK1-205ENST00000555402 SPAM1P38567 509 aa3.32□□□□□ -1.88
VRK1-205ENST00000555402 NDUFA8P51970 172 aa3.32□□□□□ -1.88
VRK1-205ENST00000555402 PFN3P60673 137 aa3.32□□□□□ -1.88
VRK1-205ENST00000555402 RPL23P62829 140 aaKnown RBP3.32□□□□□ -1.88
VRK1-205ENST00000555402 CDK5Q00535 292 aa3.32□□□□□ -1.88
VRK1-205ENST00000555402 MPV17L2Q567V2 206 aa3.32□□□□□ -1.88
VRK1-205ENST00000555402 PP632Q6XCG6 107 aa3.32□□□□□ -1.88
VRK1-205ENST00000555402 ST13P4Q8IZP2 240 aaPredicted RBP3.32□□□□□ -1.88
VRK1-205ENST00000555402 OR4A15Q8NGL6 344 aa3.32□□□□□ -1.88
VRK1-205ENST00000555402 OR13C9Q8NGT0 318 aa3.32□□□□□ -1.88
VRK1-205ENST00000555402 ANGPTL6Q8NI99 470 aa3.32□□□□□ -1.88
VRK1-205ENST00000555402 TM6SF2Q9BZW4 377 aa3.32□□□□□ -1.88
VRK1-205ENST00000555402 RRAGDQ9NQL2 400 aaPredicted RBP3.32□□□□□ -1.88
VRK1-205ENST00000555402 ZNF302Q9NR11 478 aa3.32□□□□□ -1.88
VRK1-205ENST00000555402 NRBP2Q9NSY0 501 aa3.32□□□□□ -1.88
VRK1-205ENST00000555402 SBNO1A3KN83 1393 aa3.31□□□□□ -1.88
VRK1-205ENST00000555402 IGHV3OR16-9A0A0B4J2B5 98 aa3.31□□□□□ -1.88
VRK1-205ENST00000555402 NDUFC2-KCTD14E9PQ53 114 aa3.31□□□□□ -1.88
VRK1-205ENST00000555402 APCSP02743 223 aa3.31□□□□□ -1.88
VRK1-205ENST00000555402 CCL2P13500 99 aa3.31□□□□□ -1.88
VRK1-205ENST00000555402 GFAPP14136 432 aa3.31□□□□□ -1.88
VRK1-205ENST00000555402 HOXB8P17481 243 aaPredicted RBP3.31□□□□□ -1.88
VRK1-205ENST00000555402 HTR1DP28221 377 aa3.31□□□□□ -1.88
VRK1-205ENST00000555402 GGT2P36268 569 aa3.31□□□□□ -1.88
VRK1-205ENST00000555402 CTAG1AP78358 180 aa3.31□□□□□ -1.88
VRK1-205ENST00000555402 LOXL1Q08397 574 aaPredicted RBP3.31□□□□□ -1.88
VRK1-205ENST00000555402 LINC00483Q53H64 154 aa3.31□□□□□ -1.88
VRK1-205ENST00000555402 ZNF691Q5VV52 312 aa3.31□□□□□ -1.88
VRK1-205ENST00000555402 SAXO2Q658L1 398 aa3.31□□□□□ -1.88
VRK1-205ENST00000555402 FAM71E1Q6IPT2 247 aa3.31□□□□□ -1.88
VRK1-205ENST00000555402 NTM-AS1Q6ZSK4 140 aa3.31□□□□□ -1.88
VRK1-205ENST00000555402 RAB43Q86YS6 212 aa3.31□□□□□ -1.88
VRK1-205ENST00000555402 RBM45Q8IUH3 476 aaKnown RBP3.31□□□□□ -1.88
VRK1-205ENST00000555402 CDKL3Q8IVW4 592 aaPredicted RBP3.31□□□□□ -1.88
VRK1-205ENST00000555402 LGI3Q8N145 548 aa3.31□□□□□ -1.88
VRK1-205ENST00000555402 OR4K5Q8NGD3 323 aa3.31□□□□□ -1.88
VRK1-205ENST00000555402 OR10W1Q8NGF6 305 aa3.31□□□□□ -1.88
VRK1-205ENST00000555402 UBALD1Q8TB05 177 aa3.31□□□□□ -1.88
VRK1-205ENST00000555402 RERGQ96A58 199 aaPredicted RBP3.31□□□□□ -1.88
VRK1-205ENST00000555402 ZNF488Q96MN9 340 aa3.31□□□□□ -1.88
VRK1-205ENST00000555402 AGMATQ9BSE5 352 aa3.31□□□□□ -1.88
VRK1-205ENST00000555402 HINT2Q9BX68 163 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms