RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 CD200P41217 278 aa10.42□□□□□ -0.74
TRAPPC6B-205ENST00000555269 GATA4P43694 442 aa10.42□□□□□ -0.74
TRAPPC6B-205ENST00000555269 RAD23AP54725 363 aa10.42□□□□□ -0.74
TRAPPC6B-205ENST00000555269 CXCR4P61073 352 aa10.42□□□□□ -0.74
TRAPPC6B-205ENST00000555269 SEC61A1P61619 476 aaKnown RBP10.42□□□□□ -0.74
TRAPPC6B-205ENST00000555269 ZNF826PQ6ZT77 177 aa10.42□□□□□ -0.74
TRAPPC6B-205ENST00000555269 SLC35F2Q8IXU6 374 aa10.42□□□□□ -0.74
TRAPPC6B-205ENST00000555269 C10orf67Q8IYJ2 551 aa10.42□□□□□ -0.74
TRAPPC6B-205ENST00000555269 BOLLQ8N9W6 283 aaKnown RBP10.42□□□□□ -0.74
TRAPPC6B-205ENST00000555269 DEFB108BQ8NET1 73 aa10.42□□□□□ -0.74
TRAPPC6B-205ENST00000555269 OR8B12Q8NGG6 310 aa10.42□□□□□ -0.74
TRAPPC6B-205ENST00000555269 OR51G2Q8NGK0 314 aa10.42□□□□□ -0.74
TRAPPC6B-205ENST00000555269 OR51F2Q8NH61 342 aa10.42□□□□□ -0.74
TRAPPC6B-205ENST00000555269 EME1Q96AY2 570 aa10.42□□□□□ -0.74
TRAPPC6B-205ENST00000555269 RAB39BQ96DA2 213 aa10.42□□□□□ -0.74
TRAPPC6B-205ENST00000555269 RAB3IPQ96QF0 476 aaPredicted RBP10.42□□□□□ -0.74
TRAPPC6B-205ENST00000555269 OR8B4Q96RC9 309 aa10.42□□□□□ -0.74
TRAPPC6B-205ENST00000555269 CNN2Q99439 309 aaKnown RBP10.42□□□□□ -0.74
TRAPPC6B-205ENST00000555269 TBX5Q99593 518 aa10.42□□□□□ -0.74
TRAPPC6B-205ENST00000555269 ADAT1Q9BUB4 502 aaKnown RBP10.42□□□□□ -0.74
TRAPPC6B-205ENST00000555269 MROQ9BYG7 248 aa10.42□□□□□ -0.74
TRAPPC6B-205ENST00000555269 SLC22A4Q9H015 551 aa10.42□□□□□ -0.74
TRAPPC6B-205ENST00000555269 PATZ1Q9HBE1 687 aaKnown RBP10.42□□□□□ -0.74
TRAPPC6B-205ENST00000555269 USE1Q9NZ43 259 aa10.42□□□□□ -0.74
TRAPPC6B-205ENST00000555269 LPAR3Q9UBY5 353 aa10.42□□□□□ -0.74
TRAPPC6B-205ENST00000555269 ENOPH1Q9UHY7 261 aa10.42□□□□□ -0.74
TRAPPC6B-205ENST00000555269 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.42□□□□□ -0.743e-15■■■■■ 56.9
TRAPPC6B-205ENST00000555269 TMEM269A0A1B0GVZ9 245 aa10.41□□□□□ -0.74
TRAPPC6B-205ENST00000555269 SLC22A31A6NKX4 558 aa10.41□□□□□ -0.74
TRAPPC6B-205ENST00000555269 ANKRD30BLA7E2S9 258 aa10.41□□□□□ -0.74
TRAPPC6B-205ENST00000555269 ANKRD65E5RJM6 399 aa10.41□□□□□ -0.74
TRAPPC6B-205ENST00000555269 PNPP00491 289 aa10.41□□□□□ -0.74
TRAPPC6B-205ENST00000555269 WNT2P09544 360 aa10.41□□□□□ -0.74
TRAPPC6B-205ENST00000555269 SRD5A1P18405 259 aa10.41□□□□□ -0.74
TRAPPC6B-205ENST00000555269 ALDH3A2P51648 485 aa10.41□□□□□ -0.74
TRAPPC6B-205ENST00000555269 SRSF2Q01130 221 aaKnown RBP10.41□□□□□ -0.74
TRAPPC6B-205ENST00000555269 ROM1Q03395 351 aa10.41□□□□□ -0.74
TRAPPC6B-205ENST00000555269 DMRTC1Q5HYR2 192 aa10.41□□□□□ -0.74
TRAPPC6B-205ENST00000555269 KCTD18Q6PI47 426 aaPredicted RBP10.41□□□□□ -0.74
TRAPPC6B-205ENST00000555269 DEGS2Q6QHC5 323 aa10.41□□□□□ -0.74
TRAPPC6B-205ENST00000555269 ZNF322Q6U7Q0 402 aaPredicted RBP10.41□□□□□ -0.74
TRAPPC6B-205ENST00000555269 LYPD2Q6UXB3 125 aa10.41□□□□□ -0.74
TRAPPC6B-205ENST00000555269 PLEKHG7Q6ZR37 379 aa10.41□□□□□ -0.74
TRAPPC6B-205ENST00000555269 C1orf229Q6ZS94 237 aaPredicted RBP10.41□□□□□ -0.74
TRAPPC6B-205ENST00000555269 SSX6Q7RTT6 188 aa10.41□□□□□ -0.74
TRAPPC6B-205ENST00000555269 C11orf53Q8IXP5 236 aa10.41□□□□□ -0.74
TRAPPC6B-205ENST00000555269 ZNF679Q8IYX0 411 aa10.41□□□□□ -0.74
TRAPPC6B-205ENST00000555269 KLHL36Q8N4N3 616 aa10.41□□□□□ -0.74
TRAPPC6B-205ENST00000555269 CELF2-AS1Q8N7Q2 184 aa10.41□□□□□ -0.74
TRAPPC6B-205ENST00000555269 OR8J1Q8NGP2 316 aa10.41□□□□□ -0.74
TRAPPC6B-205ENST00000555269 FAM81AQ8TBF8 368 aa10.41□□□□□ -0.74
TRAPPC6B-205ENST00000555269 ASB17Q8WXJ9 295 aa10.41□□□□□ -0.74
TRAPPC6B-205ENST00000555269 MBOAT4Q96T53 435 aa10.41□□□□□ -0.74
TRAPPC6B-205ENST00000555269 TMEM246Q9BRR3 403 aa10.41□□□□□ -0.74
TRAPPC6B-205ENST00000555269 OPA3Q9H6K4 179 aa10.41□□□□□ -0.74
TRAPPC6B-205ENST00000555269 METTL17Q9H7H0 456 aaPredicted RBP10.41□□□□□ -0.74
TRAPPC6B-205ENST00000555269 G6PC2Q9NQR9 355 aa10.41□□□□□ -0.74
TRAPPC6B-205ENST00000555269 MMP26Q9NRE1 261 aa10.41□□□□□ -0.74
TRAPPC6B-205ENST00000555269 C1orf123Q9NWV4 160 aa10.41□□□□□ -0.74
TRAPPC6B-205ENST00000555269 CLN6Q9NWW5 311 aa10.41□□□□□ -0.74
TRAPPC6B-205ENST00000555269 FAM206AQ9NX38 181 aa10.41□□□□□ -0.74
TRAPPC6B-205ENST00000555269 HAO2Q9NYQ3 351 aa10.41□□□□□ -0.74
TRAPPC6B-205ENST00000555269 WARS2Q9UGM6 360 aaKnown RBP10.41□□□□□ -0.74
TRAPPC6B-205ENST00000555269 MRM2Q9UI43 246 aaKnown RBP10.41□□□□□ -0.74
TRAPPC6B-205ENST00000555269 IKZF2Q9UKS7 526 aa10.41□□□□□ -0.74
TRAPPC6B-205ENST00000555269 PPIAL4EA0A075B759 164 aa10.4□□□□□ -0.74
TRAPPC6B-205ENST00000555269 TRAV20A0A0B4J274 112 aa10.4□□□□□ -0.74
TRAPPC6B-205ENST00000555269 LRRC30A6NM36 301 aa10.4□□□□□ -0.74
TRAPPC6B-205ENST00000555269 ZNF850A8MQ14 1090 aa10.4□□□□□ -0.74
TRAPPC6B-205ENST00000555269 CEACAM18A8MTB9 384 aa10.4□□□□□ -0.74
TRAPPC6B-205ENST00000555269 E9PQ18 207 aa10.4□□□□□ -0.74
TRAPPC6B-205ENST00000555269 ZNF670-ZNF695F2Z2N8 137 aa10.4□□□□□ -0.74
TRAPPC6B-205ENST00000555269 PPIAL4DF5H284 164 aa10.4□□□□□ -0.74
TRAPPC6B-205ENST00000555269 TRAPPC2LH3BP13 241 aa10.4□□□□□ -0.74
TRAPPC6B-205ENST00000555269 IFNL4K9M1U5 179 aa10.4□□□□□ -0.74
TRAPPC6B-205ENST00000555269 ST8SIA5O15466 376 aa10.4□□□□□ -0.74
TRAPPC6B-205ENST00000555269 PHF1O43189 567 aaPredicted RBP10.4□□□□□ -0.74
TRAPPC6B-205ENST00000555269 ENTPD6O75354 484 aa10.4□□□□□ -0.74
TRAPPC6B-205ENST00000555269 IFNA2P01563 188 aa10.4□□□□□ -0.74
TRAPPC6B-205ENST00000555269 PPIAL4FP0DN26 164 aa10.4□□□□□ -0.74
TRAPPC6B-205ENST00000555269 HTR1FP30939 366 aa10.4□□□□□ -0.74
TRAPPC6B-205ENST00000555269 SRP14P37108 136 aaKnown RBP10.4□□□□□ -0.74
TRAPPC6B-205ENST00000555269 MDH2P40926 338 aaKnown RBP10.4□□□□□ -0.74
TRAPPC6B-205ENST00000555269 PSMA6P60900 246 aaKnown RBP10.4□□□□□ -0.74
TRAPPC6B-205ENST00000555269 MFGE8Q08431 387 aaPredicted RBP10.4□□□□□ -0.74
TRAPPC6B-205ENST00000555269 POU4F2Q12837 409 aa10.4□□□□□ -0.74
TRAPPC6B-205ENST00000555269 ZNF181Q2M3W8 571 aa10.4□□□□□ -0.74
TRAPPC6B-205ENST00000555269 TMEM155Q4W5P6 130 aa10.4□□□□□ -0.74
TRAPPC6B-205ENST00000555269 SFRP4Q6FHJ7 346 aaPredicted RBP10.4□□□□□ -0.74
TRAPPC6B-205ENST00000555269 ZBTB49Q6ZSB9 765 aa10.4□□□□□ -0.74
TRAPPC6B-205ENST00000555269 WDR86Q86TI4 376 aa10.4□□□□□ -0.74
TRAPPC6B-205ENST00000555269 GID4Q8IVV7 300 aa10.4□□□□□ -0.74
TRAPPC6B-205ENST00000555269 PQLC1Q8N2U9 271 aa10.4□□□□□ -0.74
TRAPPC6B-205ENST00000555269 SPICQ8N5J4 248 aa10.4□□□□□ -0.74
TRAPPC6B-205ENST00000555269 Q8TCH9 128 aa10.4□□□□□ -0.74
TRAPPC6B-205ENST00000555269 PIGCQ92535 297 aa10.4□□□□□ -0.74
TRAPPC6B-205ENST00000555269 HRASLS5Q96KN8 279 aa10.4□□□□□ -0.74
TRAPPC6B-205ENST00000555269 PBOV1Q9GZY1 135 aa10.4□□□□□ -0.74
TRAPPC6B-205ENST00000555269 RGCCQ9H4X1 137 aa10.4□□□□□ -0.74
TRAPPC6B-205ENST00000555269 NIPAL2Q9H841 368 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms