RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 OR10AC1Q8NH08 325 aa9.38□□□□□ -0.91
SHMT2-218ENST00000555213 SLC7A6Q92536 515 aa9.38□□□□□ -0.91
SHMT2-218ENST00000555213 NRGNQ92686 78 aa9.38□□□□□ -0.91
SHMT2-218ENST00000555213 MRPL24Q96A35 216 aaKnown RBP9.38□□□□□ -0.91
SHMT2-218ENST00000555213 KCNJ15Q99712 375 aa9.38□□□□□ -0.91
SHMT2-218ENST00000555213 DYNLRB1Q9NP97 96 aa9.38□□□□□ -0.91
SHMT2-218ENST00000555213 BEX4Q9NWD9 120 aaPredicted RBP9.38□□□□□ -0.91
SHMT2-218ENST00000555213 FAM206AQ9NX38 181 aa9.38□□□□□ -0.91
SHMT2-218ENST00000555213 PTTG2Q9NZH5 202 aa9.38□□□□□ -0.91
SHMT2-218ENST00000555213 SSR3Q9UNL2 185 aa9.38□□□□□ -0.91
SHMT2-218ENST00000555213 R4GMQ9 66 aa9.38□□□□□ -0.91
SHMT2-218ENST00000555213 NBPF19A0A087WUL8 3843 aa9.38□□□□□ -0.91
SHMT2-218ENST00000555213 TEP1Q99973 2627 aaKnown RBP9.37□□□□□ -0.91
SHMT2-218ENST00000555213 TRBV5-5A0A0J9YX44 114 aa9.37□□□□□ -0.91
SHMT2-218ENST00000555213 LCATP04180 440 aa9.37□□□□□ -0.91
SHMT2-218ENST00000555213 SOD3P08294 240 aa9.37□□□□□ -0.91
SHMT2-218ENST00000555213 ACSM4P0C7M7 580 aa9.37□□□□□ -0.91
SHMT2-218ENST00000555213 CLEC2LP0C7M8 214 aa9.37□□□□□ -0.91
SHMT2-218ENST00000555213 DANCRP0C864 163 aa9.37□□□□□ -0.91
SHMT2-218ENST00000555213 CX3CR1P49238 355 aa9.37□□□□□ -0.91
SHMT2-218ENST00000555213 MMP16P51512 607 aa9.37□□□□□ -0.91
SHMT2-218ENST00000555213 RIDAP52758 137 aaKnown RBP9.37□□□□□ -0.91
SHMT2-218ENST00000555213 LSAMPQ13449 338 aa9.37□□□□□ -0.91
SHMT2-218ENST00000555213 ZNF829Q3KNS6 432 aaPredicted RBP9.37□□□□□ -0.91
SHMT2-218ENST00000555213 ZNF718Q3SXZ3 478 aa9.37□□□□□ -0.91
SHMT2-218ENST00000555213 ACSM3Q53FZ2 586 aa9.37□□□□□ -0.91
SHMT2-218ENST00000555213 FAM27D1Q5T7N8 215 aa9.37□□□□□ -0.91
SHMT2-218ENST00000555213 C22orf42Q6IC83 251 aa9.37□□□□□ -0.91
SHMT2-218ENST00000555213 FAM220AQ7Z4H9 259 aa9.37□□□□□ -0.91
SHMT2-218ENST00000555213 MS4A15Q8N5U1 240 aa9.37□□□□□ -0.91
SHMT2-218ENST00000555213 SYNPRQ8TBG9 265 aa9.37□□□□□ -0.91
SHMT2-218ENST00000555213 DCUN1D5Q9BTE7 237 aa9.37□□□□□ -0.91
SHMT2-218ENST00000555213 TRAF4Q9BUZ4 470 aaPredicted RBP9.37□□□□□ -0.91
SHMT2-218ENST00000555213 BARHL1Q9BZE3 327 aa9.37□□□□□ -0.91
SHMT2-218ENST00000555213 SLIRPQ9GZT3 109 aaKnown RBP9.37□□□□□ -0.91
SHMT2-218ENST00000555213 NXF2Q9GZY0 626 aaKnown RBP9.37□□□□□ -0.91
SHMT2-218ENST00000555213 DCSTAMPQ9H295 470 aa9.37□□□□□ -0.91
SHMT2-218ENST00000555213 DUSP13Q9UII6 198 aa9.37□□□□□ -0.91
SHMT2-218ENST00000555213 ZNF281Q9Y2X9 895 aa9.37□□□□□ -0.91
SHMT2-218ENST00000555213 ROS1P08922 2347 aa9.37□□□□□ -0.91
SHMT2-218ENST00000555213 PLCE1Q9P212 2302 aa9.37□□□□□ -0.91
SHMT2-218ENST00000555213 A0A1B0GTI1 187 aa9.36□□□□□ -0.91
SHMT2-218ENST00000555213 TMEM269A0A1B0GVZ9 245 aa9.36□□□□□ -0.91
SHMT2-218ENST00000555213 M0R233 179 aa9.36□□□□□ -0.91
SHMT2-218ENST00000555213 RGS9O75916 674 aaPredicted RBP9.36□□□□□ -0.91
SHMT2-218ENST00000555213 ANXA2P07355 339 aaKnown RBP9.36□□□□□ -0.91
SHMT2-218ENST00000555213 ZNF250P15622 560 aa9.36□□□□□ -0.91
SHMT2-218ENST00000555213 EVX1P49640 407 aa9.36□□□□□ -0.91
SHMT2-218ENST00000555213 PRKXP51817 358 aa9.36□□□□□ -0.91
SHMT2-218ENST00000555213 PSMA6P60900 246 aaKnown RBP9.36□□□□□ -0.91
SHMT2-218ENST00000555213 ERVS71-1P61550 626 aa9.36□□□□□ -0.91
SHMT2-218ENST00000555213 TRAM1Q15629 374 aa9.36□□□□□ -0.91
SHMT2-218ENST00000555213 NKPD1Q17RQ9 610 aa9.36□□□□□ -0.91
SHMT2-218ENST00000555213 TIMM50Q3ZCQ8 353 aa9.36□□□□□ -0.91
SHMT2-218ENST00000555213 ZMAT1Q5H9K5 638 aa9.36□□□□□ -0.91
SHMT2-218ENST00000555213 CEP78Q5JTW2 689 aa9.36□□□□□ -0.91
SHMT2-218ENST00000555213 SPATA46Q5T0L3 261 aa9.36□□□□□ -0.91
SHMT2-218ENST00000555213 MBNL2Q5VZF2 373 aaKnown RBP9.36□□□□□ -0.91
SHMT2-218ENST00000555213 ASPHD2Q6ICH7 369 aa9.36□□□□□ -0.91
SHMT2-218ENST00000555213 USP43Q70EL4 1123 aa9.36□□□□□ -0.91
SHMT2-218ENST00000555213 CEACAM19Q7Z692 300 aa9.36□□□□□ -0.91
SHMT2-218ENST00000555213 NR2C2APQ86WQ0 139 aa9.36□□□□□ -0.91
SHMT2-218ENST00000555213 ELMOD2Q8IZ81 293 aa9.36□□□□□ -0.91
SHMT2-218ENST00000555213 OR52H1Q8NGJ2 320 aa9.36□□□□□ -0.91
SHMT2-218ENST00000555213 SLC25A40Q8TBP6 338 aa9.36□□□□□ -0.91
SHMT2-218ENST00000555213 HAVCR2Q8TDQ0 301 aa9.36□□□□□ -0.91
SHMT2-218ENST00000555213 ORAI1Q96D31 301 aa9.36□□□□□ -0.91
SHMT2-218ENST00000555213 MBD6Q96DN6 1003 aa9.36□□□□□ -0.91
SHMT2-218ENST00000555213 SYT3Q9BQG1 590 aa9.36□□□□□ -0.91
SHMT2-218ENST00000555213 C1QTNF5Q9BXJ0 243 aa9.36□□□□□ -0.91
SHMT2-218ENST00000555213 MRPL37Q9BZE1 423 aaKnown RBP9.36□□□□□ -0.91
SHMT2-218ENST00000555213 OR2J1Q9GZK6 312 aa9.36□□□□□ -0.91
SHMT2-218ENST00000555213 LIME1Q9H400 295 aa9.36□□□□□ -0.91
SHMT2-218ENST00000555213 ZCCHC4Q9H5U6 513 aa9.36□□□□□ -0.91
SHMT2-218ENST00000555213 OPA3Q9H6K4 179 aa9.36□□□□□ -0.91
SHMT2-218ENST00000555213 EXOSC4Q9NPD3 245 aaKnown RBP9.36□□□□□ -0.91
SHMT2-218ENST00000555213 CGGBP1Q9UFW8 167 aaPredicted RBP9.36□□□□□ -0.91
SHMT2-218ENST00000555213 OR52A1Q9UKL2 312 aa9.36□□□□□ -0.91
SHMT2-218ENST00000555213 SPG11Q96JI7 2443 aa9.35□□□□□ -0.91
SHMT2-218ENST00000555213 TRBV5-7A0A0A0MS05 114 aa9.35□□□□□ -0.91
SHMT2-218ENST00000555213 A0A1W2PPK0 400 aa9.35□□□□□ -0.91
SHMT2-218ENST00000555213 PLSCR5A0PG75 271 aa9.35□□□□□ -0.91
SHMT2-218ENST00000555213 TIMM8AO60220 97 aaPredicted RBP9.35□□□□□ -0.91
SHMT2-218ENST00000555213 NGFP01138 241 aa9.35□□□□□ -0.91
SHMT2-218ENST00000555213 IGLV3-1P01715 115 aa9.35□□□□□ -0.91
SHMT2-218ENST00000555213 TTRP02766 147 aa9.35□□□□□ -0.91
SHMT2-218ENST00000555213 ISG15P05161 165 aa9.35□□□□□ -0.91
SHMT2-218ENST00000555213 UCHL1P09936 223 aa9.35□□□□□ -0.91
SHMT2-218ENST00000555213 SELEP16581 610 aa9.35□□□□□ -0.91
SHMT2-218ENST00000555213 CFL1P23528 166 aaKnown RBP9.35□□□□□ -0.91
SHMT2-218ENST00000555213 SDC2P34741 201 aa9.35□□□□□ -0.91
SHMT2-218ENST00000555213 SERPINB10P48595 397 aa9.35□□□□□ -0.91
SHMT2-218ENST00000555213 PPOXP50336 477 aa9.35□□□□□ -0.91
SHMT2-218ENST00000555213 ZNF121P58317 390 aaPredicted RBP9.35□□□□□ -0.91
SHMT2-218ENST00000555213 DEFB113Q30KQ7 82 aa9.35□□□□□ -0.91
SHMT2-218ENST00000555213 YIF1BQ5BJH7 314 aa9.35□□□□□ -0.91
SHMT2-218ENST00000555213 COLCA1Q6ZS62 124 aa9.35□□□□□ -0.91
SHMT2-218ENST00000555213 MRPL21Q7Z2W9 205 aaKnown RBP9.35□□□□□ -0.91
SHMT2-218ENST00000555213 OR51A4Q8NGJ6 313 aa9.35□□□□□ -0.91
SHMT2-218ENST00000555213 OR5AK2Q8NH90 309 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms