RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 MEIOCA2RUB1 952 aa7.75□□□□□ -1.17
TDP1-210ENST00000554976 FOXI3A8MTJ6 420 aaPredicted RBP7.75□□□□□ -1.17
TDP1-210ENST00000554976 ORC5O43913 435 aa7.75□□□□□ -1.17
TDP1-210ENST00000554976 PATE4P0C8F1 98 aa7.75□□□□□ -1.17
TDP1-210ENST00000554976 EDN3P14138 238 aa7.75□□□□□ -1.17
TDP1-210ENST00000554976 PRF1P14222 555 aa7.75□□□□□ -1.17
TDP1-210ENST00000554976 ALDH3B1P43353 468 aa7.75□□□□□ -1.17
TDP1-210ENST00000554976 OR3A2P47893 321 aa7.75□□□□□ -1.17
TDP1-210ENST00000554976 POLR2GP62487 172 aaKnown RBP eCLIP7.75□□□□□ -1.17
TDP1-210ENST00000554976 S100A12P80511 92 aa7.75□□□□□ -1.17
TDP1-210ENST00000554976 ARF1P84077 181 aaKnown RBP7.75□□□□□ -1.17
TDP1-210ENST00000554976 SCRN3Q0VDG4 424 aa7.75□□□□□ -1.17
TDP1-210ENST00000554976 ECH1Q13011 328 aa7.75□□□□□ -1.17
TDP1-210ENST00000554976 GLYATL3Q5SZD4 288 aa7.75□□□□□ -1.17
TDP1-210ENST00000554976 GLT8D1Q68CQ7 371 aa7.75□□□□□ -1.17
TDP1-210ENST00000554976 TMEM42Q69YG0 159 aa7.75□□□□□ -1.17
TDP1-210ENST00000554976 RPUSD3Q6P087 351 aaKnown RBP7.75□□□□□ -1.17
TDP1-210ENST00000554976 ZNF584Q8IVC4 421 aa7.75□□□□□ -1.17
TDP1-210ENST00000554976 CITED4Q96RK1 184 aa7.75□□□□□ -1.17
TDP1-210ENST00000554976 MARVELD1Q9BSK0 173 aa7.75□□□□□ -1.17
TDP1-210ENST00000554976 CALHM2Q9HA72 323 aa7.75□□□□□ -1.17
TDP1-210ENST00000554976 CKLFQ9UBR5 152 aa7.75□□□□□ -1.17
TDP1-210ENST00000554976 PRSS50Q9UI38 385 aa7.75□□□□□ -1.17
TDP1-210ENST00000554976 CLEC4AQ9UMR7 237 aa7.75□□□□□ -1.17
TDP1-210ENST00000554976 A0A1B0GVI7 797 aa7.75□□□□□ -1.17
TDP1-210ENST00000554976 GGT3PA6NGU5 568 aa7.75□□□□□ -1.17
TDP1-210ENST00000554976 TMEM14DPA8MWL7 114 aa7.75□□□□□ -1.17
TDP1-210ENST00000554976 PEX14O75381 377 aa7.75□□□□□ -1.17
TDP1-210ENST00000554976 COX5BP10606 129 aa7.75□□□□□ -1.17
TDP1-210ENST00000554976 THBS4P35443 961 aa7.75□□□□□ -1.17
TDP1-210ENST00000554976 HTR2BP41595 481 aa7.75□□□□□ -1.17
TDP1-210ENST00000554976 ZNF169Q14929 603 aaPredicted RBP7.75□□□□□ -1.17
TDP1-210ENST00000554976 TMEM255AQ5JRV8 349 aa7.75□□□□□ -1.17
TDP1-210ENST00000554976 TRIQKQ629K1 86 aa7.75□□□□□ -1.17
TDP1-210ENST00000554976 OLFML2AQ68BL7 652 aa7.75□□□□□ -1.17
TDP1-210ENST00000554976 PGAP1Q75T13 922 aa7.75□□□□□ -1.17
TDP1-210ENST00000554976 ABHD12BQ7Z5M8 362 aaPredicted RBP7.75□□□□□ -1.17
TDP1-210ENST00000554976 ZNF100Q8IYN0 542 aa7.75□□□□□ -1.17
TDP1-210ENST00000554976 GCDHQ92947 438 aaPredicted RBP7.75□□□□□ -1.17
TDP1-210ENST00000554976 SORCS2Q96PQ0 1159 aa7.75□□□□□ -1.17
TDP1-210ENST00000554976 CHST5Q9GZS9 411 aa7.75□□□□□ -1.17
TDP1-210ENST00000554976 TMEM138Q9NPI0 162 aa7.75□□□□□ -1.17
TDP1-210ENST00000554976 LOC100509620A0A075B734 347 aa7.74□□□□□ -1.17
TDP1-210ENST00000554976 ANKRD20A5PA0PJZ0 165 aa7.74□□□□□ -1.17
TDP1-210ENST00000554976 CD3GP09693 182 aa7.74□□□□□ -1.17
TDP1-210ENST00000554976 ATF4P18848 351 aaPredicted RBP7.74□□□□□ -1.17
TDP1-210ENST00000554976 ACKR3P25106 362 aa7.74□□□□□ -1.17
TDP1-210ENST00000554976 DYRK1AQ13627 763 aa7.74□□□□□ -1.17
TDP1-210ENST00000554976 TAF13Q15543 124 aa7.74□□□□□ -1.17
TDP1-210ENST00000554976 UBE2V2Q15819 145 aa7.74□□□□□ -1.17
TDP1-210ENST00000554976 CARTPTQ16568 116 aa7.74□□□□□ -1.17
TDP1-210ENST00000554976 OR5D14Q8NGL3 314 aa7.74□□□□□ -1.17
TDP1-210ENST00000554976 AKR7LQ8NHP1 331 aa7.74□□□□□ -1.17
TDP1-210ENST00000554976 UBASH3BQ8TF42 649 aa7.74□□□□□ -1.17
TDP1-210ENST00000554976 SPTSSAQ969W0 71 aa7.74□□□□□ -1.17
TDP1-210ENST00000554976 S100A16Q96FQ6 103 aaKnown RBP7.74□□□□□ -1.17
TDP1-210ENST00000554976 GMPPAQ96IJ6 420 aaPredicted RBP7.74□□□□□ -1.17
TDP1-210ENST00000554976 NUDT16L1Q9BRJ7 211 aaKnown RBP7.74□□□□□ -1.17
TDP1-210ENST00000554976 PLEK2Q9NYT0 353 aa7.74□□□□□ -1.17
TDP1-210ENST00000554976 DKK4Q9UBT3 224 aa7.74□□□□□ -1.17
TDP1-210ENST00000554976 CDV3Q9UKY7 258 aaKnown RBP7.74□□□□□ -1.17
TDP1-210ENST00000554976 CACNG2Q9Y698 323 aa7.74□□□□□ -1.17
TDP1-210ENST00000554976 DOCK7Q96N67 2140 aa7.74□□□□□ -1.17
TDP1-210ENST00000554976 hCG_38984A0A1B0GV85 526 aa7.74□□□□□ -1.17
TDP1-210ENST00000554976 SLC22A20A6NK97 555 aa7.74□□□□□ -1.17
TDP1-210ENST00000554976 KDM4BO94953 1096 aa7.74□□□□□ -1.17
TDP1-210ENST00000554976 BPNT1O95861 308 aa7.74□□□□□ -1.17
TDP1-210ENST00000554976 IGHV3-9P01782 118 aa7.74□□□□□ -1.17
TDP1-210ENST00000554976 PTHLHP12272 177 aa7.74□□□□□ -1.17
TDP1-210ENST00000554976 RAB3AP20336 220 aa7.74□□□□□ -1.17
TDP1-210ENST00000554976 PCBD1P61457 104 aa7.74□□□□□ -1.17
TDP1-210ENST00000554976 MRPS10P82664 201 aaKnown RBP7.74□□□□□ -1.17
TDP1-210ENST00000554976 OR8B8Q15620 311 aa7.74□□□□□ -1.17
TDP1-210ENST00000554976 MOGAT2Q3SYC2 334 aa7.74□□□□□ -1.17
TDP1-210ENST00000554976 SEM1Q6ZVN7 128 aa7.74□□□□□ -1.17
TDP1-210ENST00000554976 OR52H1Q8NGJ2 320 aa7.74□□□□□ -1.17
TDP1-210ENST00000554976 OR1K1Q8NGR3 316 aa7.74□□□□□ -1.17
TDP1-210ENST00000554976 OR52I2Q8NH67 350 aa7.74□□□□□ -1.17
TDP1-210ENST00000554976 BCL2L2Q92843 193 aaPredicted RBP7.74□□□□□ -1.17
TDP1-210ENST00000554976 APH1AQ96BI3 265 aa7.74□□□□□ -1.17
TDP1-210ENST00000554976 PGAM5Q96HS1 289 aa7.74□□□□□ -1.17
TDP1-210ENST00000554976 A0A0A6YYD4 124 aa7.73□□□□□ -1.17
TDP1-210ENST00000554976 PCP4L1A6NKN8 68 aa7.73□□□□□ -1.17
TDP1-210ENST00000554976 ZNF587BE7ETH6 402 aa7.73□□□□□ -1.17
TDP1-210ENST00000554976 F5H5K5 113 aa7.73□□□□□ -1.17
TDP1-210ENST00000554976 TFECO14948 347 aaPredicted RBP7.73□□□□□ -1.17
TDP1-210ENST00000554976 APOC1P02654 83 aa7.73□□□□□ -1.17
TDP1-210ENST00000554976 VSIG8P0DPA2 414 aa7.73□□□□□ -1.17
TDP1-210ENST00000554976 ZP1P60852 638 aa7.73□□□□□ -1.17
TDP1-210ENST00000554976 PABPC1L2AQ5JQF8 200 aa7.73□□□□□ -1.17
TDP1-210ENST00000554976 TOR2AQ5JU69 321 aa7.73□□□□□ -1.17
TDP1-210ENST00000554976 TFAP2EQ6VUC0 442 aa7.73□□□□□ -1.17
TDP1-210ENST00000554976 SLC16A14Q7RTX9 510 aa7.73□□□□□ -1.17
TDP1-210ENST00000554976 OR13C9Q8NGT0 318 aa7.73□□□□□ -1.17
TDP1-210ENST00000554976 LRRC20Q8TCA0 184 aa7.73□□□□□ -1.17
TDP1-210ENST00000554976 C7orf50Q9BRJ6 194 aaKnown RBP7.73□□□□□ -1.17
TDP1-210ENST00000554976 PRRG4Q9BZD6 226 aa7.73□□□□□ -1.17
TDP1-210ENST00000554976 LDAHQ9H6V9 325 aa7.73□□□□□ -1.17
TDP1-210ENST00000554976 GLRX2Q9NS18 164 aa7.73□□□□□ -1.17
TDP1-210ENST00000554976 LHX6Q9UPM6 363 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms