RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 A6NJ64 397 aa13.96□□□□□ -0.18
SYNE3-203ENST00000554873 TNFSF14O43557 240 aa13.96□□□□□ -0.18
SYNE3-203ENST00000554873 APBB3O95704 486 aa13.96□□□□□ -0.18
SYNE3-203ENST00000554873 DANCRP0C864 163 aa13.96□□□□□ -0.18
SYNE3-203ENST00000554873 RGS19P49795 217 aa13.96□□□□□ -0.18
SYNE3-203ENST00000554873 GXYLT1Q4G148 440 aa13.96□□□□□ -0.18
SYNE3-203ENST00000554873 TANGO2Q6ICL3 276 aa13.96□□□□□ -0.18
SYNE3-203ENST00000554873 LEG1Q6P5S2 330 aa13.96□□□□□ -0.18
SYNE3-203ENST00000554873 MDGA2Q7Z553 956 aa13.96□□□□□ -0.18
SYNE3-203ENST00000554873 THNSL2Q86YJ6 484 aa13.96□□□□□ -0.18
SYNE3-203ENST00000554873 FOXRED2Q8IWF2 684 aa13.96□□□□□ -0.18
SYNE3-203ENST00000554873 OR51A4Q8NGJ6 313 aa13.96□□□□□ -0.18
SYNE3-203ENST00000554873 ADGRG7Q96K78 797 aa13.96□□□□□ -0.18
SYNE3-203ENST00000554873 ZNF385AQ96PM9 386 aaKnown RBP13.96□□□□□ -0.18
SYNE3-203ENST00000554873 RXFP3Q9NSD7 469 aa13.96□□□□□ -0.18
SYNE3-203ENST00000554873 URGCP-MRPS24S4R325 110 aa13.96□□□□□ -0.18
SYNE3-203ENST00000554873 UNC80Q8N2C7 3258 aa13.95□□□□□ -0.18
SYNE3-203ENST00000554873 NKX2-2O95096 273 aa13.95□□□□□ -0.18
SYNE3-203ENST00000554873 IGKV1D-16P01601 117 aa13.95□□□□□ -0.18
SYNE3-203ENST00000554873 GABRR1P24046 479 aa13.95□□□□□ -0.18
SYNE3-203ENST00000554873 RPL4P36578 427 aaKnown RBP13.95□□□□□ -0.18
SYNE3-203ENST00000554873 RUNX3Q13761 415 aa13.95□□□□□ -0.18
SYNE3-203ENST00000554873 KIRREL2Q6UWL6 708 aa13.95□□□□□ -0.18
SYNE3-203ENST00000554873 ZNF101Q8IZC7 436 aa13.95□□□□□ -0.18
SYNE3-203ENST00000554873 OR52R1Q8NGF1 315 aa13.95□□□□□ -0.18
SYNE3-203ENST00000554873 CTHRC1Q96CG8 243 aa13.95□□□□□ -0.18
SYNE3-203ENST00000554873 SMDT1Q9H4I9 107 aa13.95□□□□□ -0.18
SYNE3-203ENST00000554873 IL23AQ9NPF7 189 aa13.95□□□□□ -0.18
SYNE3-203ENST00000554873 A0A1B0GW64 132 aa13.95□□□□□ -0.18
SYNE3-203ENST00000554873 ELOA3DA6NLF2 546 aaPredicted RBP13.95□□□□□ -0.18
SYNE3-203ENST00000554873 TMEM212A6NML5 194 aa13.95□□□□□ -0.18
SYNE3-203ENST00000554873 FAM171A2A8MVW0 826 aa13.95□□□□□ -0.18
SYNE3-203ENST00000554873 H0YGG7 62 aa13.95□□□□□ -0.18
SYNE3-203ENST00000554873 CAMLGP49069 296 aa13.95□□□□□ -0.18
SYNE3-203ENST00000554873 NPY4RP50391 375 aa13.95□□□□□ -0.18
SYNE3-203ENST00000554873 ARF3P61204 181 aaPredicted RBP13.95□□□□□ -0.18
SYNE3-203ENST00000554873 ELOA3BQ3SY89 546 aa13.95□□□□□ -0.18
SYNE3-203ENST00000554873 ELOA3Q8NG57 546 aa13.95□□□□□ -0.18
SYNE3-203ENST00000554873 OR1E3Q8WZA6 343 aa13.95□□□□□ -0.18
SYNE3-203ENST00000554873 RAB39BQ96DA2 213 aa13.95□□□□□ -0.18
SYNE3-203ENST00000554873 C2orf50Q96LR7 162 aa13.95□□□□□ -0.18
SYNE3-203ENST00000554873 CCNL2Q96S94 520 aaPredicted RBP13.95□□□□□ -0.18
SYNE3-203ENST00000554873 CRISPLD2Q9H0B8 497 aa13.95□□□□□ -0.18
SYNE3-203ENST00000554873 FBXL17Q9UF56 701 aa13.95□□□□□ -0.18
SYNE3-203ENST00000554873 IL17BQ9UHF5 180 aa13.95□□□□□ -0.18
SYNE3-203ENST00000554873 A0A1B0GTH9 108 aa13.94□□□□□ -0.18
SYNE3-203ENST00000554873 TGOLN2O43493 480 aa13.94□□□□□ -0.18
SYNE3-203ENST00000554873 ZNF10P21506 573 aaPredicted RBP13.94□□□□□ -0.18
SYNE3-203ENST00000554873 KIR3DL2P43630 455 aa13.94□□□□□ -0.18
SYNE3-203ENST00000554873 PSG6Q00889 435 aa13.94□□□□□ -0.18
SYNE3-203ENST00000554873 INSM1Q01101 510 aaPredicted RBP13.94□□□□□ -0.18
SYNE3-203ENST00000554873 RASGEF1BQ0VAM2 473 aa13.94□□□□□ -0.18
SYNE3-203ENST00000554873 KIR2DS3Q14952 304 aa13.94□□□□□ -0.18
SYNE3-203ENST00000554873 TMEM128Q5BJH2 165 aa13.94□□□□□ -0.18
SYNE3-203ENST00000554873 OR10G6Q8NH81 332 aa13.94□□□□□ -0.18
SYNE3-203ENST00000554873 MFSD8Q8NHS3 518 aa13.94□□□□□ -0.18
SYNE3-203ENST00000554873 THRSPQ92748 146 aa13.94□□□□□ -0.18
SYNE3-203ENST00000554873 SLC26A1Q9H2B4 701 aa13.94□□□□□ -0.18
SYNE3-203ENST00000554873 EML5Q05BV3 1969 aa13.94□□□□□ -0.18
SYNE3-203ENST00000554873 ZNF705GA8MUZ8 300 aaPredicted RBP13.94□□□□□ -0.18
SYNE3-203ENST00000554873 H3BSH0 61 aa13.94□□□□□ -0.18
SYNE3-203ENST00000554873 DFFBO76075 338 aa13.94□□□□□ -0.18
SYNE3-203ENST00000554873 ABHD16AO95870 558 aa13.94□□□□□ -0.18
SYNE3-203ENST00000554873 GCGP01275 180 aa13.94□□□□□ -0.18
SYNE3-203ENST00000554873 S100A10P60903 97 aa13.94□□□□□ -0.18
SYNE3-203ENST00000554873 GLO1Q04760 184 aa13.94□□□□□ -0.18
SYNE3-203ENST00000554873 FAM53BQ14153 422 aa13.94□□□□□ -0.18
SYNE3-203ENST00000554873 ULK3Q6PHR2 472 aa13.94□□□□□ -0.18
SYNE3-203ENST00000554873 ANKRD9Q96BM1 317 aaPredicted RBP13.94□□□□□ -0.18
SYNE3-203ENST00000554873 RASD2Q96D21 266 aa13.94□□□□□ -0.18
SYNE3-203ENST00000554873 ADAD1Q96M93 576 aaKnown RBP13.94□□□□□ -0.18
SYNE3-203ENST00000554873 G6PC3Q9BUM1 346 aa13.94□□□□□ -0.18
SYNE3-203ENST00000554873 USP34Q70CQ2 3546 aa13.94□□□□□ -0.18
SYNE3-203ENST00000554873 TICRRQ7Z2Z1 1910 aa13.94□□□□□ -0.18
SYNE3-203ENST00000554873 FITM1A5D6W6 292 aa13.93□□□□□ -0.18
SYNE3-203ENST00000554873 H3BQ15 152 aa13.93□□□□□ -0.18
SYNE3-203ENST00000554873 RPLP1P05386 114 aaKnown RBP13.93□□□□□ -0.18
SYNE3-203ENST00000554873 PVRP15151 417 aa13.93□□□□□ -0.18
SYNE3-203ENST00000554873 UBE2KP61086 200 aa13.93□□□□□ -0.18
SYNE3-203ENST00000554873 ENPP2Q13822 863 aa13.93□□□□□ -0.18
SYNE3-203ENST00000554873 DPY19L2P2Q6ZN68 376 aa13.93□□□□□ -0.18
SYNE3-203ENST00000554873 TMEM183AQ8IXX5 376 aa13.93□□□□□ -0.18
SYNE3-203ENST00000554873 POC1AQ8NBT0 407 aa13.93□□□□□ -0.18
SYNE3-203ENST00000554873 NPRL2Q8WTW4 380 aa13.93□□□□□ -0.18
SYNE3-203ENST00000554873 RCC1LQ96I51 464 aaKnown RBP13.93□□□□□ -0.18
SYNE3-203ENST00000554873 SHDQ96IW2 340 aa13.93□□□□□ -0.18
SYNE3-203ENST00000554873 INTS14Q96SY0 518 aa13.93□□□□□ -0.18
SYNE3-203ENST00000554873 NMNAT2Q9BZQ4 307 aa13.93□□□□□ -0.18
SYNE3-203ENST00000554873 ZNF346Q9UL40 294 aaKnown RBP13.93□□□□□ -0.18
SYNE3-203ENST00000554873 ARHGEF17Q96PE2 2063 aaPredicted RBP13.93□□□□□ -0.18
SYNE3-203ENST00000554873 C4orf47A7E2U8 309 aa13.93□□□□□ -0.18
SYNE3-203ENST00000554873 M0QZK8 103 aa13.93□□□□□ -0.18
SYNE3-203ENST00000554873 GGCTO75223 188 aaKnown RBP13.93□□□□□ -0.18
SYNE3-203ENST00000554873 CXCR1P25024 350 aa13.93□□□□□ -0.18
SYNE3-203ENST00000554873 RPL12P30050 165 aaKnown RBP13.93□□□□□ -0.18
SYNE3-203ENST00000554873 SLC35A1P78382 337 aa13.93□□□□□ -0.18
SYNE3-203ENST00000554873 TMEM31Q5JXX7 168 aa13.93□□□□□ -0.18
SYNE3-203ENST00000554873 FJX1Q86VR8 437 aa13.93□□□□□ -0.18
SYNE3-203ENST00000554873 PRSS58Q8IYP2 241 aa13.93□□□□□ -0.18
SYNE3-203ENST00000554873 KDM8Q8N371 416 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms