RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 NCBP2P52298 156 aaKnown RBP eCLIP4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 SMIM11AP58511 58 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 CDC42P60953 191 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 POLR2GP62487 172 aaKnown RBP eCLIP4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 RPS21P63220 83 aaKnown RBP4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 CDK5Q00535 292 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 RELAQ04206 551 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 SLC3A1Q07837 685 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 TAF13Q15543 124 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 SSX1Q16384 188 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 EXT1Q16394 746 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 ZNF404Q494X3 552 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 SLC25A53Q5H9E4 307 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 SLC25A30Q5SVS4 291 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 CLVS2Q5SYC1 327 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 TPRG1LQ5T0D9 272 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 MEDAGQ5VYS4 303 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 RNLSQ5VYX0 342 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 ZNF324BQ6AW86 544 aaPredicted RBP4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 ACSM5Q6NUN0 579 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 SLC48A1Q6P1K1 146 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 KCNIP4Q6PIL6 250 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 PRSS57Q6UWY2 283 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 UNQ6126/PRO20091Q6UXV3 157 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 Q6ZSR6 202 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 FAM92BQ6ZTR7 304 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 USP43Q70EL4 1123 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 VN1R4Q7Z5H5 301 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 LHFPL4Q7Z7J7 247 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 AKAP14Q86UN6 197 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 GABRG1Q8N1C3 465 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 SLC22A18ASQ8N1D0 253 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 RAB42Q8N4Z0 105 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 ACOT4Q8N9L9 421 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 PROKR2Q8NFJ6 384 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 OR2L5Q8NG80 312 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 OR6T1Q8NGN1 323 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 MCFD2Q8NI22 146 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 RASSF5Q8WWW0 418 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 PIGCQ92535 297 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 TM4SF19Q96DZ7 209 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 ZHX1-C8orf76Q96EF9 292 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 SMIM10Q96HG1 83 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 OPALINQ96PE5 141 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 IL4I1Q96RQ9 567 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 MGLLQ99685 303 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 ARHGDIGQ99819 225 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 FAIM2Q9BWQ8 316 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 HINT2Q9BX68 163 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 C1QTNF4Q9BXJ3 329 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 RAB1BQ9H0U4 201 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 POLR2J3Q9H1A7 115 aaKnown RBP4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 SLC38A1Q9H2H9 487 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 ARMC7Q9H6L4 198 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 ZBTB20Q9HC78 741 aaPredicted RBP4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 FGF22Q9HCT0 170 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 IMP3Q9NV31 184 aaKnown RBP4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 MED17Q9NVC6 651 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 CLN6Q9NWW5 311 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 IMPAD1Q9NX62 359 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 GIN1Q9NXP7 522 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 DNAJC27Q9NZQ0 273 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 CCDC59Q9P031 241 aaKnown RBP4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 P2RX2Q9UBL9 471 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 ENOPH1Q9UHY7 261 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 PITPNC1Q9UKF7 332 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 RBMX2Q9Y388 322 aaKnown RBP4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 KLF2Q9Y5W3 355 aaPredicted RBP4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 NPTNQ9Y639 398 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 UBR5O95071 2799 aaPredicted RBP4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 NAV2Q8IVL1 2488 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 SCN2AQ99250 2005 aa4.5□□□□□ -1.69
MTHFD1-206ENST00000554353 IGKV2D-30A0A075B6S6 120 aa4.49□□□□□ -1.69
MTHFD1-206ENST00000554353 A0A087WUU8 490 aa4.49□□□□□ -1.69
MTHFD1-206ENST00000554353 A0A1W2PQ72 361 aa4.49□□□□□ -1.69
MTHFD1-206ENST00000554353 LOC390937A0A1W2PQ73 354 aa4.49□□□□□ -1.69
MTHFD1-206ENST00000554353 MEX3AA1L020 520 aaKnown RBP4.49□□□□□ -1.69
MTHFD1-206ENST00000554353 OR6C70A6NIJ9 312 aa4.49□□□□□ -1.69
MTHFD1-206ENST00000554353 SERPINE3A8MV23 424 aa4.49□□□□□ -1.69
MTHFD1-206ENST00000554353 TMEM150CB9EJG8 249 aa4.49□□□□□ -1.69
MTHFD1-206ENST00000554353 BTN3A3O00478 584 aa4.49□□□□□ -1.69
MTHFD1-206ENST00000554353 ITGB1BP1O14713 200 aa4.49□□□□□ -1.69
MTHFD1-206ENST00000554353 CHEK1O14757 476 aa4.49□□□□□ -1.69
MTHFD1-206ENST00000554353 EMC8O43402 210 aa4.49□□□□□ -1.69
MTHFD1-206ENST00000554353 PRKYO43930 277 aa4.49□□□□□ -1.69
MTHFD1-206ENST00000554353 OR10H3O60404 316 aa4.49□□□□□ -1.69
MTHFD1-206ENST00000554353 RPP14O95059 124 aaKnown RBP4.49□□□□□ -1.69
MTHFD1-206ENST00000554353 SOX14O95416 240 aa4.49□□□□□ -1.69
MTHFD1-206ENST00000554353 PPP1R3DO95685 299 aa4.49□□□□□ -1.69
MTHFD1-206ENST00000554353 IGHV2-70P01814 119 aa4.49□□□□□ -1.69
MTHFD1-206ENST00000554353 THY1P04216 161 aa4.49□□□□□ -1.69
MTHFD1-206ENST00000554353 HMGN2P05204 90 aaKnown RBP4.49□□□□□ -1.69
MTHFD1-206ENST00000554353 GIMD1P0DJR0 217 aa4.49□□□□□ -1.69
MTHFD1-206ENST00000554353 CSNK2A2P19784 350 aaPredicted RBP4.49□□□□□ -1.69
MTHFD1-206ENST00000554353 IL12BP29460 328 aa4.49□□□□□ -1.69
MTHFD1-206ENST00000554353 CMPK1P30085 196 aa4.49□□□□□ -1.69
MTHFD1-206ENST00000554353 NTSP30990 170 aa4.49□□□□□ -1.69
MTHFD1-206ENST00000554353 PTGER4P35408 488 aa4.49□□□□□ -1.69
MTHFD1-206ENST00000554353 FEN1P39748 380 aaKnown RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms