RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 H3BNX3 289 aa5.5□□□□□ -1.53
SLIRP-203ENST00000554074 TNFRSF13BO14836 293 aaPredicted RBP5.5□□□□□ -1.53
SLIRP-203ENST00000554074 TMPRSS2O15393 492 aa5.5□□□□□ -1.53
SLIRP-203ENST00000554074 XRCC2O43543 280 aa5.5□□□□□ -1.53
SLIRP-203ENST00000554074 ZNF205O95201 554 aa5.5□□□□□ -1.53
SLIRP-203ENST00000554074 IFNGP01579 166 aa5.5□□□□□ -1.53
SLIRP-203ENST00000554074 APOC1P02654 83 aa5.5□□□□□ -1.53
SLIRP-203ENST00000554074 HMGN1P05114 100 aa5.5□□□□□ -1.53
SLIRP-203ENST00000554074 OSMP13725 252 aa5.5□□□□□ -1.53
SLIRP-203ENST00000554074 CA6P23280 308 aa5.5□□□□□ -1.53
SLIRP-203ENST00000554074 PYCR1P32322 319 aa5.5□□□□□ -1.53
SLIRP-203ENST00000554074 SLC15A1P46059 708 aa5.5□□□□□ -1.53
SLIRP-203ENST00000554074 GRB2P62993 217 aaKnown RBP5.5□□□□□ -1.53
SLIRP-203ENST00000554074 ZNF92Q03936 586 aa5.5□□□□□ -1.53
SLIRP-203ENST00000554074 SLC9A3R2Q15599 337 aa5.5□□□□□ -1.53
SLIRP-203ENST00000554074 MPPED2Q15777 294 aa5.5□□□□□ -1.53
SLIRP-203ENST00000554074 GLYATL3Q5SZD4 288 aa5.5□□□□□ -1.53
SLIRP-203ENST00000554074 KDM4DQ6B0I6 523 aa5.5□□□□□ -1.53
SLIRP-203ENST00000554074 DCXRQ7Z4W1 244 aa5.5□□□□□ -1.53
SLIRP-203ENST00000554074 PQLC1Q8N2U9 271 aa5.5□□□□□ -1.53
SLIRP-203ENST00000554074 TMEM86BQ8N661 226 aa5.5□□□□□ -1.53
SLIRP-203ENST00000554074 CYB561A3Q8NBI2 242 aa5.5□□□□□ -1.53
SLIRP-203ENST00000554074 OR2T33Q8NG76 320 aa5.5□□□□□ -1.53
SLIRP-203ENST00000554074 OR9Q2Q8NGE9 314 aa5.5□□□□□ -1.53
SLIRP-203ENST00000554074 OR8D4Q8NGM9 314 aa5.5□□□□□ -1.53
SLIRP-203ENST00000554074 TEX47Q8TBZ9 253 aa5.5□□□□□ -1.53
SLIRP-203ENST00000554074 ZNRF4Q8WWF5 429 aa5.5□□□□□ -1.53
SLIRP-203ENST00000554074 PYDC1Q8WXC3 89 aa5.5□□□□□ -1.53
SLIRP-203ENST00000554074 LRTOMTQ8WZ04 291 aa5.5□□□□□ -1.53
SLIRP-203ENST00000554074 SLAMF6Q96DU3 332 aa5.5□□□□□ -1.53
SLIRP-203ENST00000554074 DMRTB1Q96MA1 342 aa5.5□□□□□ -1.53
SLIRP-203ENST00000554074 RDH12Q96NR8 316 aa5.5□□□□□ -1.53
SLIRP-203ENST00000554074 COPS4Q9BT78 406 aa5.5□□□□□ -1.53
SLIRP-203ENST00000554074 ADAT1Q9BUB4 502 aaKnown RBP5.5□□□□□ -1.53
SLIRP-203ENST00000554074 SLITRK2Q9H156 845 aa5.5□□□□□ -1.53
SLIRP-203ENST00000554074 SP140LQ9H930 580 aa5.5□□□□□ -1.53
SLIRP-203ENST00000554074 PAPOLBQ9NRJ5 636 aaKnown RBP5.5□□□□□ -1.53
SLIRP-203ENST00000554074 TBC1D23Q9NUY8 699 aa5.5□□□□□ -1.53
SLIRP-203ENST00000554074 C14orf119Q9NWQ9 140 aa5.5□□□□□ -1.53
SLIRP-203ENST00000554074 VNN3Q9NY84 501 aa5.5□□□□□ -1.53
SLIRP-203ENST00000554074 USE1Q9NZ43 259 aa5.5□□□□□ -1.53
SLIRP-203ENST00000554074 KIF17Q9P2E2 1029 aa5.5□□□□□ -1.53
SLIRP-203ENST00000554074 ERVK-18Q9QC07 812 aa5.5□□□□□ -1.53
SLIRP-203ENST00000554074 KAAG1Q9UBP8 84 aa5.5□□□□□ -1.53
SLIRP-203ENST00000554074 ORC6Q9Y5N6 252 aa5.5□□□□□ -1.53
SLIRP-203ENST00000554074 MMP24Q9Y5R2 645 aa5.5□□□□□ -1.53
SLIRP-203ENST00000554074 U3KQV3 271 aa5.5□□□□□ -1.53
SLIRP-203ENST00000554074 TRAV38-1A0A0B4J264 116 aa5.49□□□□□ -1.53
SLIRP-203ENST00000554074 IGHV3-64DA0A0J9YX35 117 aa5.49□□□□□ -1.53
SLIRP-203ENST00000554074 A0A1B0GUS0 222 aa5.49□□□□□ -1.53
SLIRP-203ENST00000554074 OOEPA6NGQ2 149 aa5.49□□□□□ -1.53
SLIRP-203ENST00000554074 ERICH4A6NGS2 130 aa5.49□□□□□ -1.53
SLIRP-203ENST00000554074 GGT3PA6NGU5 568 aa5.49□□□□□ -1.53
SLIRP-203ENST00000554074 TVP23AA6NH52 213 aa5.49□□□□□ -1.53
SLIRP-203ENST00000554074 RIIAD1A6NNX1 92 aa5.49□□□□□ -1.53
SLIRP-203ENST00000554074 ANKRD30BLA7E2S9 258 aa5.49□□□□□ -1.53
SLIRP-203ENST00000554074 SRRM5B3KS81 715 aa5.49□□□□□ -1.53
SLIRP-203ENST00000554074 ZNF879B4DU55 563 aa5.49□□□□□ -1.53
SLIRP-203ENST00000554074 C22orf46C9J442 243 aa5.49□□□□□ -1.53
SLIRP-203ENST00000554074 P2RY10O00398 339 aa5.49□□□□□ -1.53
SLIRP-203ENST00000554074 ZNF593O00488 134 aaPredicted RBP5.49□□□□□ -1.53
SLIRP-203ENST00000554074 ECDO95905 644 aaPredicted RBP5.49□□□□□ -1.53
SLIRP-203ENST00000554074 LHBP01229 141 aa5.49□□□□□ -1.53
SLIRP-203ENST00000554074 SPARCP09486 303 aa5.49□□□□□ -1.53
SLIRP-203ENST00000554074 PSKH1P11801 424 aa5.49□□□□□ -1.53
SLIRP-203ENST00000554074 ZNF3P17036 446 aa5.49□□□□□ -1.53
SLIRP-203ENST00000554074 SPI1P17947 270 aa5.49□□□□□ -1.53
SLIRP-203ENST00000554074 CFL1P23528 166 aaKnown RBP5.49□□□□□ -1.53
SLIRP-203ENST00000554074 GRK5P34947 590 aa5.49□□□□□ -1.53
SLIRP-203ENST00000554074 CFHR2P36980 270 aa5.49□□□□□ -1.53
SLIRP-203ENST00000554074 RPS27P42677 84 aaKnown RBP5.49□□□□□ -1.53
SLIRP-203ENST00000554074 PRSS12P56730 875 aa5.49□□□□□ -1.53
SLIRP-203ENST00000554074 RPL15P61313 204 aaKnown RBP5.49□□□□□ -1.53
SLIRP-203ENST00000554074 FGF12P61328 243 aa5.49□□□□□ -1.53
SLIRP-203ENST00000554074 DBPQ10586 325 aaPredicted RBP5.49□□□□□ -1.53
SLIRP-203ENST00000554074 RIPK1Q13546 671 aa5.49□□□□□ -1.53
SLIRP-203ENST00000554074 CRMP1Q14194 572 aa5.49□□□□□ -1.53
SLIRP-203ENST00000554074 TAF13Q15543 124 aa5.49□□□□□ -1.53
SLIRP-203ENST00000554074 SNCBQ16143 134 aa5.49□□□□□ -1.53
SLIRP-203ENST00000554074 FAM201AQ5SY85 155 aa5.49□□□□□ -1.53
SLIRP-203ENST00000554074 LINC01590Q5TEZ4 76 aa5.49□□□□□ -1.53
SLIRP-203ENST00000554074 GPR157Q5UAW9 335 aa5.49□□□□□ -1.53
SLIRP-203ENST00000554074 PRAMEF6Q5VXH4 476 aa5.49□□□□□ -1.53
SLIRP-203ENST00000554074 TEX36Q5VZQ5 186 aa5.49□□□□□ -1.53
SLIRP-203ENST00000554074 C16orf87Q6PH81 154 aa5.49□□□□□ -1.53
SLIRP-203ENST00000554074 LYPD4Q6UWN0 246 aa5.49□□□□□ -1.53
SLIRP-203ENST00000554074 LYPD2Q6UXB3 125 aa5.49□□□□□ -1.53
SLIRP-203ENST00000554074 TMEM179BQ7Z7N9 219 aa5.49□□□□□ -1.53
SLIRP-203ENST00000554074 AMIGO2Q86SJ2 522 aa5.49□□□□□ -1.53
SLIRP-203ENST00000554074 GCSAMQ8N6F7 178 aa5.49□□□□□ -1.53
SLIRP-203ENST00000554074 PACRGLQ8N7B6 248 aa5.49□□□□□ -1.53
SLIRP-203ENST00000554074 PNLDC1Q8NA58 520 aaKnown RBP5.49□□□□□ -1.53
SLIRP-203ENST00000554074 ZNF511Q8NB15 262 aa5.49□□□□□ -1.53
SLIRP-203ENST00000554074 OR56B2PQ8NGI1 322 aa5.49□□□□□ -1.53
SLIRP-203ENST00000554074 OR52H1Q8NGJ2 320 aa5.49□□□□□ -1.53
SLIRP-203ENST00000554074 OR9Q1Q8NGQ5 310 aa5.49□□□□□ -1.53
SLIRP-203ENST00000554074 OR4Q3Q8NH05 313 aa5.49□□□□□ -1.53
SLIRP-203ENST00000554074 OR2AE1Q8NHA4 323 aa5.49□□□□□ -1.53
SLIRP-203ENST00000554074 ITFG2Q969R8 447 aa5.49□□□□□ -1.53
SLIRP-203ENST00000554074 FAM71F1Q96KD3 344 aaPredicted RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms