RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 DUX4L6P0CJ89 424 aa5.5□□□□□ -1.53
ATXN3-224ENST00000554040 DUX4L7P0CJ90 424 aa5.5□□□□□ -1.53
ATXN3-224ENST00000554040 PAX6P26367 422 aa5.5□□□□□ -1.53
ATXN3-224ENST00000554040 RPL14P50914 215 aaKnown RBP5.5□□□□□ -1.53
ATXN3-224ENST00000554040 CNN3Q15417 329 aaKnown RBP5.5□□□□□ -1.53
ATXN3-224ENST00000554040 NPTX1Q15818 432 aa5.5□□□□□ -1.53
ATXN3-224ENST00000554040 CCDC92Q53HC0 331 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-224ENST00000554040 RABL3Q5HYI8 236 aa5.5□□□□□ -1.53
ATXN3-224ENST00000554040 TCTEX1D4Q5JR98 221 aa5.5□□□□□ -1.53
ATXN3-224ENST00000554040 ENTPD8Q5MY95 495 aa5.5□□□□□ -1.53
ATXN3-224ENST00000554040 GCNT6Q5T4J0 391 aa5.5□□□□□ -1.53
ATXN3-224ENST00000554040 TEX36Q5VZQ5 186 aa5.5□□□□□ -1.53
ATXN3-224ENST00000554040 HCP5Q6MZN7 132 aa5.5□□□□□ -1.53
ATXN3-224ENST00000554040 DUX4L9Q6RFH8 374 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-224ENST00000554040 UNQ9370/PRO34162Q6UXP9 181 aa5.5□□□□□ -1.53
ATXN3-224ENST00000554040 GCSAMQ8N6F7 178 aa5.5□□□□□ -1.53
ATXN3-224ENST00000554040 OR6T1Q8NGN1 323 aa5.5□□□□□ -1.53
ATXN3-224ENST00000554040 TCP10LQ8TDR4 215 aa5.5□□□□□ -1.53
ATXN3-224ENST00000554040 LRRC8CQ8TDW0 803 aa5.5□□□□□ -1.53
ATXN3-224ENST00000554040 ADAMTS16Q8TE57 1224 aa5.5□□□□□ -1.53
ATXN3-224ENST00000554040 AENQ8WTP8 325 aaKnown RBP5.5□□□□□ -1.53
ATXN3-224ENST00000554040 ITCHQ96J02 903 aa5.5□□□□□ -1.53
ATXN3-224ENST00000554040 CCL13Q99616 98 aa5.5□□□□□ -1.53
ATXN3-224ENST00000554040 MCRIP2Q9BUT9 160 aaKnown RBP5.5□□□□□ -1.53
ATXN3-224ENST00000554040 HCAR1Q9BXC0 346 aa5.5□□□□□ -1.53
ATXN3-224ENST00000554040 PRSS22Q9GZN4 317 aa5.5□□□□□ -1.53
ATXN3-224ENST00000554040 SLC22A4Q9H015 551 aa5.5□□□□□ -1.53
ATXN3-224ENST00000554040 MUC13Q9H3R2 512 aa5.5□□□□□ -1.53
ATXN3-224ENST00000554040 METTL8Q9H825 291 aaKnown RBP5.5□□□□□ -1.53
ATXN3-224ENST00000554040 RMND5AQ9H871 391 aa5.5□□□□□ -1.53
ATXN3-224ENST00000554040 WDR76Q9H967 626 aa5.5□□□□□ -1.53
ATXN3-224ENST00000554040 PPCSQ9HAB8 311 aa5.5□□□□□ -1.53
ATXN3-224ENST00000554040 EMC7Q9NPA0 242 aa5.5□□□□□ -1.53
ATXN3-224ENST00000554040 DUX4Q9UBX2 424 aa5.5□□□□□ -1.53
ATXN3-224ENST00000554040 SLC7A7Q9UM01 511 aa5.5□□□□□ -1.53
ATXN3-224ENST00000554040 PRPF19Q9UMS4 504 aaKnown RBP5.5□□□□□ -1.53
ATXN3-224ENST00000554040 ANGPT4Q9Y264 503 aa5.5□□□□□ -1.53
ATXN3-224ENST00000554040 RAP2CQ9Y3L5 183 aa5.5□□□□□ -1.53
ATXN3-224ENST00000554040 KMT2AQ03164 3969 aa5.49□□□□□ -1.53
ATXN3-224ENST00000554040 DNAH10Q8IVF4 4471 aa5.49□□□□□ -1.53
ATXN3-224ENST00000554040 IGHV3OR15-7A0A075B7D8 119 aa5.49□□□□□ -1.53
ATXN3-224ENST00000554040 TRAPPC13A5PLN9 417 aa5.49□□□□□ -1.53
ATXN3-224ENST00000554040 SMIM23A6NLE4 172 aa5.49□□□□□ -1.53
ATXN3-224ENST00000554040 H0YHG0 523 aa5.49□□□□□ -1.53
ATXN3-224ENST00000554040 M0R1W7 72 aa5.49□□□□□ -1.53
ATXN3-224ENST00000554040 F2RL2O00254 374 aa5.49□□□□□ -1.53
ATXN3-224ENST00000554040 NDUFB3O43676 98 aa5.49□□□□□ -1.53
ATXN3-224ENST00000554040 RAMP3O60896 148 aa5.49□□□□□ -1.53
ATXN3-224ENST00000554040 SPAG7O75391 227 aa5.49□□□□□ -1.53
ATXN3-224ENST00000554040 IGF2P01344 180 aa5.49□□□□□ -1.53
ATXN3-224ENST00000554040 MT-ND1P03886 318 aa5.49□□□□□ -1.53
ATXN3-224ENST00000554040 CCDC159P0C7I6 412 aa5.49□□□□□ -1.53
ATXN3-224ENST00000554040 PAICSP22234 425 aaKnown RBP5.49□□□□□ -1.53
ATXN3-224ENST00000554040 CHATP28329 748 aa5.49□□□□□ -1.53
ATXN3-224ENST00000554040 VDAC2P45880 294 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-224ENST00000554040 PTTG1IPP53801 180 aa5.49□□□□□ -1.53
ATXN3-224ENST00000554040 ABCE1P61221 599 aaKnown RBP5.49□□□□□ -1.53
ATXN3-224ENST00000554040 RPL27P61353 136 aaKnown RBP5.49□□□□□ -1.53
ATXN3-224ENST00000554040 BLCAPP62952 87 aa5.49□□□□□ -1.53
ATXN3-224ENST00000554040 AQP6Q13520 282 aa5.49□□□□□ -1.53
ATXN3-224ENST00000554040 OR8G1Q15617 311 aa5.49□□□□□ -1.53
ATXN3-224ENST00000554040 MICBQ29980 383 aa5.49□□□□□ -1.53
ATXN3-224ENST00000554040 C6orf10Q5SRN2 563 aa5.49□□□□□ -1.53
ATXN3-224ENST00000554040 COLCA1Q6ZS62 124 aa5.49□□□□□ -1.53
ATXN3-224ENST00000554040 ZNF826PQ6ZT77 177 aa5.49□□□□□ -1.53
ATXN3-224ENST00000554040 MSANTD1Q6ZTZ1 278 aa5.49□□□□□ -1.53
ATXN3-224ENST00000554040 CCDC121Q6ZUS5 278 aa5.49□□□□□ -1.53
ATXN3-224ENST00000554040 SLC36A1Q7Z2H8 476 aa5.49□□□□□ -1.53
ATXN3-224ENST00000554040 RBM45Q8IUH3 476 aaKnown RBP5.49□□□□□ -1.53
ATXN3-224ENST00000554040 ARMC8Q8IUR7 673 aa5.49□□□□□ -1.53
ATXN3-224ENST00000554040 SMYD1Q8NB12 490 aa5.49□□□□□ -1.53
ATXN3-224ENST00000554040 LIPHQ8WWY8 451 aa5.49□□□□□ -1.53
ATXN3-224ENST00000554040 ACOT11Q8WXI4 607 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-224ENST00000554040 TFAP2CQ92754 450 aa5.49□□□□□ -1.53
ATXN3-224ENST00000554040 GTF2H4Q92759 462 aa5.49□□□□□ -1.53
ATXN3-224ENST00000554040 SGTBQ96EQ0 304 aa5.49□□□□□ -1.53
ATXN3-224ENST00000554040 PRSS27Q9BQR3 290 aa5.49□□□□□ -1.53
ATXN3-224ENST00000554040 MLST8Q9BVC4 326 aa5.49□□□□□ -1.53
ATXN3-224ENST00000554040 C20orf27Q9GZN8 174 aa5.49□□□□□ -1.53
ATXN3-224ENST00000554040 PAIP1Q9H074 479 aaKnown RBP5.49□□□□□ -1.53
ATXN3-224ENST00000554040 C1orf123Q9NWV4 160 aa5.49□□□□□ -1.53
ATXN3-224ENST00000554040 ATPIF1Q9UII2 106 aa5.49□□□□□ -1.53
ATXN3-224ENST00000554040 PYCARDQ9ULZ3 195 aa5.49□□□□□ -1.53
ATXN3-224ENST00000554040 NOP16Q9Y3C1 178 aaKnown RBP5.49□□□□□ -1.53
ATXN3-224ENST00000554040 CAPN7Q9Y6W3 813 aa5.49□□□□□ -1.53
ATXN3-224ENST00000554040 KIAA1109Q2LD37 5005 aa5.49□□□□□ -1.53
ATXN3-224ENST00000554040 ALMS1Q8TCU4 4167 aa5.49□□□□□ -1.53
ATXN3-224ENST00000554040 A6NDX4 124 aa5.48□□□□□ -1.53
ATXN3-224ENST00000554040 NKX6-3A6NJ46 265 aa5.48□□□□□ -1.53
ATXN3-224ENST00000554040 VGLL3A8MV65 326 aa5.48□□□□□ -1.53
ATXN3-224ENST00000554040 RER1O15258 196 aa5.48□□□□□ -1.53
ATXN3-224ENST00000554040 POLR3GO15318 223 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-224ENST00000554040 GMDSO60547 372 aa5.48□□□□□ -1.53
ATXN3-224ENST00000554040 ALDOBP05062 364 aa5.48□□□□□ -1.53
ATXN3-224ENST00000554040 VIMP08670 466 aaKnown RBP5.48□□□□□ -1.53
ATXN3-224ENST00000554040 MUC1P15941 1255 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-224ENST00000554040 CA6P23280 308 aa5.48□□□□□ -1.53
ATXN3-224ENST00000554040 AQP1P29972 269 aa5.48□□□□□ -1.53
ATXN3-224ENST00000554040 TGM4P49221 684 aa5.48□□□□□ -1.53
ATXN3-224ENST00000554040 LSM6P62312 80 aaKnown RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms