RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 SRP9P49458 86 aaKnown RBP11.78□□□□□ -0.52
TUBB3-202ENST00000553656 GBX2P52951 348 aaPredicted RBP11.78□□□□□ -0.52
TUBB3-202ENST00000553656 MZT1Q08AG7 82 aa11.78□□□□□ -0.52
TUBB3-202ENST00000553656 TESK1Q15569 626 aa11.78□□□□□ -0.52
TUBB3-202ENST00000553656 OR8G1Q15617 311 aa11.78□□□□□ -0.52
TUBB3-202ENST00000553656 OR8B8Q15620 311 aa11.78□□□□□ -0.52
TUBB3-202ENST00000553656 LAIR2Q6ISS4 152 aa11.78□□□□□ -0.52
TUBB3-202ENST00000553656 Q6ZR03 302 aa11.78□□□□□ -0.52
TUBB3-202ENST00000553656 CATSPERDQ86XM0 798 aa11.78□□□□□ -0.52
TUBB3-202ENST00000553656 OR10AD1Q8NGE0 317 aa11.78□□□□□ -0.52
TUBB3-202ENST00000553656 FAM168AQ92567 244 aa11.78□□□□□ -0.52
TUBB3-202ENST00000553656 RDH5Q92781 318 aa11.78□□□□□ -0.52
TUBB3-202ENST00000553656 MYDGFQ969H8 173 aa11.78□□□□□ -0.52
TUBB3-202ENST00000553656 ADAT1Q9BUB4 502 aaKnown RBP11.78□□□□□ -0.52
TUBB3-202ENST00000553656 PAPOLGQ9BWT3 736 aaKnown RBP11.78□□□□□ -0.52
TUBB3-202ENST00000553656 G6PC2Q9NQR9 355 aa11.78□□□□□ -0.52
TUBB3-202ENST00000553656 BLOC1S6Q9UL45 172 aa11.78□□□□□ -0.52
TUBB3-202ENST00000553656 SLC22A13Q9Y226 551 aa11.78□□□□□ -0.52
TUBB3-202ENST00000553656 CAB39Q9Y376 341 aaPredicted RBP11.78□□□□□ -0.52
TUBB3-202ENST00000553656 CSMD2Q7Z408 3487 aa11.77□□□□□ -0.52
TUBB3-202ENST00000553656 LOC390937A0A1W2PQ73 354 aa11.77□□□□□ -0.53
TUBB3-202ENST00000553656 PTGES3LE9PB15 166 aa11.77□□□□□ -0.53
TUBB3-202ENST00000553656 P2RY10O00398 339 aa11.77□□□□□ -0.53
TUBB3-202ENST00000553656 MYL12BO14950 172 aa11.77□□□□□ -0.53
TUBB3-202ENST00000553656 LILRA1O75019 489 aa11.77□□□□□ -0.53
TUBB3-202ENST00000553656 NCR1O76036 304 aa11.77□□□□□ -0.53
TUBB3-202ENST00000553656 CCDC159P0C7I6 412 aa11.77□□□□□ -0.53
TUBB3-202ENST00000553656 UBCP0CG48 685 aaKnown RBP11.77□□□□□ -0.53
TUBB3-202ENST00000553656 LIMS3P0CW19 117 aa11.77□□□□□ -0.53
TUBB3-202ENST00000553656 LIMS4P0CW20 117 aa11.77□□□□□ -0.53
TUBB3-202ENST00000553656 CA6P23280 308 aa11.77□□□□□ -0.53
TUBB3-202ENST00000553656 ETV1P50549 477 aa11.77□□□□□ -0.53
TUBB3-202ENST00000553656 MRPS11P82912 194 aaKnown RBP11.77□□□□□ -0.53
TUBB3-202ENST00000553656 ODF4Q2M2E3 257 aa11.77□□□□□ -0.53
TUBB3-202ENST00000553656 WDR38Q5JTN6 314 aa11.77□□□□□ -0.53
TUBB3-202ENST00000553656 DOK3Q7L591 496 aa11.77□□□□□ -0.53
TUBB3-202ENST00000553656 KLBQ86Z14 1044 aa11.77□□□□□ -0.53
TUBB3-202ENST00000553656 KRTAP1-3Q8IUG1 177 aa11.77□□□□□ -0.53
TUBB3-202ENST00000553656 ZNF786Q8N393 782 aa11.77□□□□□ -0.53
TUBB3-202ENST00000553656 WFDC11Q8NEX6 87 aa11.77□□□□□ -0.53
TUBB3-202ENST00000553656 SEMA6DQ8NFY4 1073 aa11.77□□□□□ -0.53
TUBB3-202ENST00000553656 OR2G2Q8NGZ5 317 aa11.77□□□□□ -0.53
TUBB3-202ENST00000553656 OR8S1Q8NH09 359 aa11.77□□□□□ -0.53
TUBB3-202ENST00000553656 PELI1Q96FA3 418 aa11.77□□□□□ -0.53
TUBB3-202ENST00000553656 LYZL4Q96KX0 146 aa11.77□□□□□ -0.53
TUBB3-202ENST00000553656 PIMREGQ9BSJ6 248 aa11.77□□□□□ -0.53
TUBB3-202ENST00000553656 ISG20L2Q9H9L3 353 aaKnown RBP11.77□□□□□ -0.53
TUBB3-202ENST00000553656 ABCB9Q9NP78 766 aa11.77□□□□□ -0.53
TUBB3-202ENST00000553656 DLL4Q9NR61 685 aa11.77□□□□□ -0.53
TUBB3-202ENST00000553656 IL19Q9UHD0 177 aa11.77□□□□□ -0.53
TUBB3-202ENST00000553656 IGHV1-69-2A0A0G2JMI3 117 aa11.76□□□□□ -0.53
TUBB3-202ENST00000553656 ANXA2P2A6NMY6 339 aa11.76□□□□□ -0.53
TUBB3-202ENST00000553656 NDUFS8O00217 210 aa11.76□□□□□ -0.53
TUBB3-202ENST00000553656 SYT7O43581 403 aa11.76□□□□□ -0.53
TUBB3-202ENST00000553656 GMDSO60547 372 aa11.76□□□□□ -0.53
TUBB3-202ENST00000553656 CDC14BO60729 498 aa11.76□□□□□ -0.53
TUBB3-202ENST00000553656 DHRS3O75911 302 aa11.76□□□□□ -0.53
TUBB3-202ENST00000553656 HLA-DPB1P04440 258 aa11.76□□□□□ -0.53
TUBB3-202ENST00000553656 RPSAP08865 295 aaKnown RBP11.76□□□□□ -0.53
TUBB3-202ENST00000553656 ZNF12P17014 697 aa11.76□□□□□ -0.53
TUBB3-202ENST00000553656 ACHEP22303 614 aa11.76□□□□□ -0.53
TUBB3-202ENST00000553656 RIPPLY1Q0D2K3 151 aa11.76□□□□□ -0.53
TUBB3-202ENST00000553656 HFEQ30201 348 aa11.76□□□□□ -0.53
TUBB3-202ENST00000553656 TMEM244Q5VVB8 128 aa11.76□□□□□ -0.53
TUBB3-202ENST00000553656 FDX2Q6P4F2 183 aa11.76□□□□□ -0.53
TUBB3-202ENST00000553656 SPNS3Q6ZMD2 512 aa11.76□□□□□ -0.53
TUBB3-202ENST00000553656 SPERTQ8NA61 448 aa11.76□□□□□ -0.53
TUBB3-202ENST00000553656 CCDC54Q8NEL0 328 aa11.76□□□□□ -0.53
TUBB3-202ENST00000553656 OR52N1Q8NH53 320 aa11.76□□□□□ -0.53
TUBB3-202ENST00000553656 PPP1R14AQ96A00 147 aa11.76□□□□□ -0.53
TUBB3-202ENST00000553656 OR2V2Q96R30 315 aa11.76□□□□□ -0.53
TUBB3-202ENST00000553656 COMMD4Q9H0A8 199 aa11.76□□□□□ -0.53
TUBB3-202ENST00000553656 CHODLQ9H9P2 273 aa11.76□□□□□ -0.53
TUBB3-202ENST00000553656 PLEKHA1Q9HB21 404 aa11.76□□□□□ -0.53
TUBB3-202ENST00000553656 ENPP5Q9UJA9 477 aa11.76□□□□□ -0.53
TUBB3-202ENST00000553656 ERGIC3Q9Y282 383 aa11.76□□□□□ -0.53
TUBB3-202ENST00000553656 ZNF816-ZNF321PA0A0X1KG74 233 aa11.75□□□□□ -0.53
TUBB3-202ENST00000553656 F5H5P2 479 aa11.75□□□□□ -0.53
TUBB3-202ENST00000553656 H0YL77 283 aa11.75□□□□□ -0.53
TUBB3-202ENST00000553656 MLNRO43193 412 aa11.75□□□□□ -0.53
TUBB3-202ENST00000553656 DENRO43583 198 aaKnown RBP11.75□□□□□ -0.53
TUBB3-202ENST00000553656 IGLV3-1P01715 115 aa11.75□□□□□ -0.53
TUBB3-202ENST00000553656 CDK1P06493 297 aa11.75□□□□□ -0.53
TUBB3-202ENST00000553656 CCR9P51686 369 aa11.75□□□□□ -0.53
TUBB3-202ENST00000553656 SLC3A1Q07837 685 aa11.75□□□□□ -0.53
TUBB3-202ENST00000553656 ALKBH1Q13686 389 aaKnown RBP11.75□□□□□ -0.53
TUBB3-202ENST00000553656 RBM48Q5RL73 367 aaKnown RBP11.75□□□□□ -0.53
TUBB3-202ENST00000553656 ZBTB37Q5TC79 503 aa11.75□□□□□ -0.53
TUBB3-202ENST00000553656 OR2G6Q5TZ20 316 aa11.75□□□□□ -0.53
TUBB3-202ENST00000553656 TGIF2LYQ8IUE0 185 aa11.75□□□□□ -0.53
TUBB3-202ENST00000553656 PRSS35Q8N3Z0 413 aa11.75□□□□□ -0.53
TUBB3-202ENST00000553656 ZNF676Q8N7Q3 588 aa11.75□□□□□ -0.53
TUBB3-202ENST00000553656 C10orf105Q8TEF2 133 aa11.75□□□□□ -0.53
TUBB3-202ENST00000553656 ITLN1Q8WWA0 313 aa11.75□□□□□ -0.53
TUBB3-202ENST00000553656 PIGCQ92535 297 aa11.75□□□□□ -0.53
TUBB3-202ENST00000553656 CCL17Q92583 94 aa11.75□□□□□ -0.53
TUBB3-202ENST00000553656 MEGF10Q96KG7 1140 aa11.75□□□□□ -0.53
TUBB3-202ENST00000553656 HIST1H2AAQ96QV6 131 aa11.75□□□□□ -0.53
TUBB3-202ENST00000553656 MICU1Q9BPX6 476 aa11.75□□□□□ -0.53
TUBB3-202ENST00000553656 ZNF649Q9BS31 505 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms