RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 LRCH1Q9Y2L9 728 aa9.85□□□□□ -0.83
SRP54-203ENST00000553544 KIR2DS1A0A191URI9 304 aa9.84□□□□□ -0.83
SRP54-203ENST00000553544 MDFIC2A0A1B0GVS7 189 aa9.84□□□□□ -0.83
SRP54-203ENST00000553544 C5orf63A6NC05 138 aa9.84□□□□□ -0.83
SRP54-203ENST00000553544 FAM183AA6NL82 134 aa9.84□□□□□ -0.83
SRP54-203ENST00000553544 RIIAD1A6NNX1 92 aa9.84□□□□□ -0.83
SRP54-203ENST00000553544 H3BN98 237 aa9.84□□□□□ -0.83
SRP54-203ENST00000553544 IFNL4K9M1U5 179 aa9.84□□□□□ -0.83
SRP54-203ENST00000553544 FSTL3O95633 263 aa9.84□□□□□ -0.83
SRP54-203ENST00000553544 HLA-DPB1P04440 258 aa9.84□□□□□ -0.83
SRP54-203ENST00000553544 SPARCP09486 303 aa9.84□□□□□ -0.83
SRP54-203ENST00000553544 PAICSP22234 425 aaKnown RBP9.84□□□□□ -0.83
SRP54-203ENST00000553544 SRP9P49458 86 aaKnown RBP9.84□□□□□ -0.83
SRP54-203ENST00000553544 PRSS12P56730 875 aa9.84□□□□□ -0.83
SRP54-203ENST00000553544 CDK5Q00535 292 aa9.84□□□□□ -0.83
SRP54-203ENST00000553544 RELBQ01201 579 aa9.84□□□□□ -0.83
SRP54-203ENST00000553544 PAX2Q02962 417 aa9.84□□□□□ -0.83
SRP54-203ENST00000553544 ZNF92Q03936 586 aa9.84□□□□□ -0.83
SRP54-203ENST00000553544 MALLQ13021 153 aa9.84□□□□□ -0.83
SRP54-203ENST00000553544 MAB21L1Q13394 359 aa9.84□□□□□ -0.83
SRP54-203ENST00000553544 ATP6AP1Q15904 470 aa9.84□□□□□ -0.83
SRP54-203ENST00000553544 Q6YL49 198 aa9.84□□□□□ -0.83
SRP54-203ENST00000553544 ZDHHC13Q8IUH4 622 aa9.84□□□□□ -0.83
SRP54-203ENST00000553544 TMEM86BQ8N661 226 aa9.84□□□□□ -0.83
SRP54-203ENST00000553544 IQCF1Q8N6M8 205 aa9.84□□□□□ -0.83
SRP54-203ENST00000553544 CELF2-AS1Q8N7Q2 184 aa9.84□□□□□ -0.83
SRP54-203ENST00000553544 BHLHE23Q8NDY6 225 aa9.84□□□□□ -0.83
SRP54-203ENST00000553544 OR6K6Q8NGW6 343 aa9.84□□□□□ -0.83
SRP54-203ENST00000553544 OR5K1Q8NHB7 308 aa9.84□□□□□ -0.83
SRP54-203ENST00000553544 ZNF420Q8TAQ5 688 aaPredicted RBP9.84□□□□□ -0.83
SRP54-203ENST00000553544 PLEKHA8Q96JA3 519 aa9.84□□□□□ -0.83
SRP54-203ENST00000553544 FAM71F1Q96KD3 344 aaPredicted RBP9.84□□□□□ -0.83
SRP54-203ENST00000553544 MED20Q9H944 212 aa9.84□□□□□ -0.83
SRP54-203ENST00000553544 RNF114Q9Y508 228 aa9.84□□□□□ -0.83
SRP54-203ENST00000553544 IGHV2-70DA0A0C4DH43 119 aa9.83□□□□□ -0.84
SRP54-203ENST00000553544 SLC22A31A6NKX4 558 aa9.83□□□□□ -0.84
SRP54-203ENST00000553544 CD300LBA8K4G0 201 aa9.83□□□□□ -0.84
SRP54-203ENST00000553544 ZNF878C9JN71 531 aa9.83□□□□□ -0.84
SRP54-203ENST00000553544 F5H5P2 479 aa9.83□□□□□ -0.84
SRP54-203ENST00000553544 GLCEO94923 617 aa9.83□□□□□ -0.84
SRP54-203ENST00000553544 OSMP13725 252 aa9.83□□□□□ -0.84
SRP54-203ENST00000553544 PRKACGP22612 351 aa9.83□□□□□ -0.84
SRP54-203ENST00000553544 PMELP40967 661 aa9.83□□□□□ -0.84
SRP54-203ENST00000553544 CD200P41217 278 aa9.83□□□□□ -0.84
SRP54-203ENST00000553544 PRKXP51817 358 aa9.83□□□□□ -0.84
SRP54-203ENST00000553544 RAD23AP54725 363 aa9.83□□□□□ -0.84
SRP54-203ENST00000553544 ACTR3P61158 418 aa9.83□□□□□ -0.84
SRP54-203ENST00000553544 RPL15P61313 204 aaKnown RBP9.83□□□□□ -0.84
SRP54-203ENST00000553544 GNB2P62879 340 aa9.83□□□□□ -0.84
SRP54-203ENST00000553544 GINS1Q14691 196 aa9.83□□□□□ -0.84
SRP54-203ENST00000553544 TIGD4Q8IY51 512 aa9.83□□□□□ -0.84
SRP54-203ENST00000553544 RNF133Q8WVZ7 376 aa9.83□□□□□ -0.84
SRP54-203ENST00000553544 SPSB4Q96A44 273 aa9.83□□□□□ -0.84
SRP54-203ENST00000553544 INTS14Q96SY0 518 aa9.83□□□□□ -0.84
SRP54-203ENST00000553544 COPS4Q9BT78 406 aa9.83□□□□□ -0.84
SRP54-203ENST00000553544 CHIAQ9BZP6 476 aa9.83□□□□□ -0.84
SRP54-203ENST00000553544 TMEM165Q9HC07 324 aa9.83□□□□□ -0.84
SRP54-203ENST00000553544 TCF7L1Q9HCS4 588 aa9.83□□□□□ -0.84
SRP54-203ENST00000553544 CENPMQ9NSP4 180 aa9.83□□□□□ -0.84
SRP54-203ENST00000553544 MIOXQ9UGB7 285 aa9.83□□□□□ -0.84
SRP54-203ENST00000553544 TRAV40A0A0B4J280 105 aa9.82□□□□□ -0.84
SRP54-203ENST00000553544 CEACAM18A8MTB9 384 aa9.82□□□□□ -0.84
SRP54-203ENST00000553544 G3V2T6 193 aa9.82□□□□□ -0.84
SRP54-203ENST00000553544 TIPRLO75663 272 aa9.82□□□□□ -0.84
SRP54-203ENST00000553544 CLPXO76031 633 aa9.82□□□□□ -0.84
SRP54-203ENST00000553544 PTBP3O95758 552 aaKnown RBP9.82□□□□□ -0.84
SRP54-203ENST00000553544 HMGN1P05114 100 aa9.82□□□□□ -0.84
SRP54-203ENST00000553544 GSTT1P30711 240 aa9.82□□□□□ -0.84
SRP54-203ENST00000553544 KRTAP10-3P60369 221 aa9.82□□□□□ -0.84
SRP54-203ENST00000553544 GLYATL3Q5SZD4 288 aa9.82□□□□□ -0.84
SRP54-203ENST00000553544 GPR157Q5UAW9 335 aa9.82□□□□□ -0.84
SRP54-203ENST00000553544 BRD3OSQ6XYD6 125 aa9.82□□□□□ -0.84
SRP54-203ENST00000553544 PRSS45Q7RTY3 260 aa9.82□□□□□ -0.84
SRP54-203ENST00000553544 MRPL21Q7Z2W9 205 aaKnown RBP9.82□□□□□ -0.84
SRP54-203ENST00000553544 DPY19L4Q7Z388 723 aa9.82□□□□□ -0.84
SRP54-203ENST00000553544 MOGAT3Q86VF5 341 aa9.82□□□□□ -0.84
SRP54-203ENST00000553544 OR2AE1Q8NHA4 323 aa9.82□□□□□ -0.84
SRP54-203ENST00000553544 FAM110DQ8TAY7 271 aaPredicted RBP9.82□□□□□ -0.84
SRP54-203ENST00000553544 Q8TCH9 128 aa9.82□□□□□ -0.84
SRP54-203ENST00000553544 ERGIC1Q969X5 290 aa9.82□□□□□ -0.84
SRP54-203ENST00000553544 UTP4Q969X6 686 aaKnown RBP9.82□□□□□ -0.84
SRP54-203ENST00000553544 CENPNQ96H22 339 aaPredicted RBP9.82□□□□□ -0.84
SRP54-203ENST00000553544 AMELYQ99218 206 aa9.82□□□□□ -0.84
SRP54-203ENST00000553544 ABHD6Q9BV23 337 aa9.82□□□□□ -0.84
SRP54-203ENST00000553544 SLC22A4Q9H015 551 aa9.82□□□□□ -0.84
SRP54-203ENST00000553544 TOR3AQ9H497 397 aa9.82□□□□□ -0.84
SRP54-203ENST00000553544 PAPOLBQ9NRJ5 636 aaKnown RBP9.82□□□□□ -0.84
SRP54-203ENST00000553544 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.82□□□□□ -0.84
SRP54-203ENST00000553544 ORC6Q9Y5N6 252 aa9.82□□□□□ -0.84
SRP54-203ENST00000553544 POMT1Q9Y6A1 747 aa9.82□□□□□ -0.84
SRP54-203ENST00000553544 PRR23D1E9PI22 279 aaPredicted RBP9.81□□□□□ -0.84
SRP54-203ENST00000553544 GMDSO60547 372 aa9.81□□□□□ -0.84
SRP54-203ENST00000553544 CYB5R3P00387 301 aaPredicted RBP9.81□□□□□ -0.84
SRP54-203ENST00000553544 PRR23D2P0DMB1 279 aaPredicted RBP9.81□□□□□ -0.84
SRP54-203ENST00000553544 SLC2A1P11166 492 aa9.81□□□□□ -0.84
SRP54-203ENST00000553544 RPS2P15880 293 aaKnown RBP9.81□□□□□ -0.84
SRP54-203ENST00000553544 CA6P23280 308 aa9.81□□□□□ -0.84
SRP54-203ENST00000553544 POU1F1P28069 291 aa9.81□□□□□ -0.84
SRP54-203ENST00000553544 SLC15A1P46059 708 aa9.81□□□□□ -0.84
SRP54-203ENST00000553544 ESRRGP62508 458 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms