RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 GNB2P62879 340 aa15.18■□□□□ 0.02
SHMT2-206ENST00000553529 TIGD6Q17RP2 521 aa15.18■□□□□ 0.02
SHMT2-206ENST00000553529 ZNF181Q2M3W8 571 aa15.18■□□□□ 0.02
SHMT2-206ENST00000553529 FAHD1Q6P587 224 aa15.18■□□□□ 0.02
SHMT2-206ENST00000553529 MUC20Q8N307 709 aaPredicted RBP15.18■□□□□ 0.02
SHMT2-206ENST00000553529 GCSAMQ8N6F7 178 aa15.18■□□□□ 0.02
SHMT2-206ENST00000553529 OTOSQ8NHW6 89 aa15.18■□□□□ 0.02
SHMT2-206ENST00000553529 MMADHCQ9H3L0 296 aaPredicted RBP15.18■□□□□ 0.02
SHMT2-206ENST00000553529 SLC25A19Q9HC21 320 aa15.18■□□□□ 0.02
SHMT2-206ENST00000553529 POLR3KQ9Y2Y1 108 aaPredicted RBP15.18■□□□□ 0.02
SHMT2-206ENST00000553529 FBN3Q75N90 2809 aa15.17■□□□□ 0.02
SHMT2-206ENST00000553529 IGHV2-70DA0A0C4DH43 119 aa15.17■□□□□ 0.02
SHMT2-206ENST00000553529 A6NLC8 198 aa15.17■□□□□ 0.02
SHMT2-206ENST00000553529 LYNP07948 512 aa15.17■□□□□ 0.02
SHMT2-206ENST00000553529 H2BFMP0C1H6 154 aa15.17■□□□□ 0.02
SHMT2-206ENST00000553529 PITPNBP48739 271 aa15.17■□□□□ 0.02
SHMT2-206ENST00000553529 GSK3AP49840 483 aa15.17■□□□□ 0.02
SHMT2-206ENST00000553529 CRISP1P54107 249 aa15.17■□□□□ 0.02
SHMT2-206ENST00000553529 GRB2P62993 217 aaKnown RBP15.17■□□□□ 0.02
SHMT2-206ENST00000553529 PRB3Q04118 309 aaPredicted RBP15.17■□□□□ 0.02
SHMT2-206ENST00000553529 PAX8Q06710 450 aa15.17■□□□□ 0.02
SHMT2-206ENST00000553529 ARMCX4Q5H9R4 360 aa15.17■□□□□ 0.02
SHMT2-206ENST00000553529 OR8B12Q8NGG6 310 aa15.17■□□□□ 0.02
SHMT2-206ENST00000553529 NEIL1Q96FI4 390 aaPredicted RBP15.17■□□□□ 0.02
SHMT2-206ENST00000553529 PGAM5Q96HS1 289 aa15.17■□□□□ 0.02
SHMT2-206ENST00000553529 PAPOLBQ9NRJ5 636 aaKnown RBP15.17■□□□□ 0.02
SHMT2-206ENST00000553529 MRPL15Q9P015 296 aaKnown RBP15.17■□□□□ 0.02
SHMT2-206ENST00000553529 OR5V1Q9UGF6 321 aa15.17■□□□□ 0.02
SHMT2-206ENST00000553529 LRP12Q9Y561 859 aa15.17■□□□□ 0.02
SHMT2-206ENST00000553529 hCG_1807616A0A1W2PRN6 198 aa15.16■□□□□ 0.02
SHMT2-206ENST00000553529 TNFRSF13BO14836 293 aaPredicted RBP15.16■□□□□ 0.02
SHMT2-206ENST00000553529 PTBP3O95758 552 aaKnown RBP15.16■□□□□ 0.02
SHMT2-206ENST00000553529 ANXA8P13928 327 aa15.16■□□□□ 0.02
SHMT2-206ENST00000553529 POLR2IP36954 125 aaKnown RBP15.16■□□□□ 0.02
SHMT2-206ENST00000553529 MFGE8Q08431 387 aaPredicted RBP15.16■□□□□ 0.02
SHMT2-206ENST00000553529 PTGES3Q15185 160 aaKnown RBP15.16■□□□□ 0.02
SHMT2-206ENST00000553529 OR8B8Q15620 311 aa15.16■□□□□ 0.02
SHMT2-206ENST00000553529 SNAPC1Q16533 368 aa15.16■□□□□ 0.02
SHMT2-206ENST00000553529 WDR25Q64LD2 544 aaPredicted RBP15.16■□□□□ 0.02
SHMT2-206ENST00000553529 PLEKHG7Q6ZR37 379 aa15.16■□□□□ 0.02
SHMT2-206ENST00000553529 FAM90A1Q86YD7 464 aa15.16■□□□□ 0.02
SHMT2-206ENST00000553529 BPIFB2Q8N4F0 458 aa15.16■□□□□ 0.02
SHMT2-206ENST00000553529 OR11L1Q8NGX0 322 aa15.16■□□□□ 0.02
SHMT2-206ENST00000553529 ZNF418Q8TF45 676 aaPredicted RBP15.16■□□□□ 0.02
SHMT2-206ENST00000553529 LRTOMTQ8WZ04 291 aa15.16■□□□□ 0.02
SHMT2-206ENST00000553529 SEMA6AQ9H2E6 1030 aa15.16■□□□□ 0.02
SHMT2-206ENST00000553529 FN3KRPQ9HA64 309 aa15.16■□□□□ 0.02
SHMT2-206ENST00000553529 ZNF556Q9HAH1 456 aa15.16■□□□□ 0.02
SHMT2-206ENST00000553529 KIF17Q9P2E2 1029 aa15.16■□□□□ 0.02
SHMT2-206ENST00000553529 RNF7Q9UBF6 113 aa15.16■□□□□ 0.02
SHMT2-206ENST00000553529 LRCH1Q9Y2L9 728 aa15.16■□□□□ 0.02
SHMT2-206ENST00000553529 TRAV40A0A0B4J280 105 aa15.15■□□□□ 0.02
SHMT2-206ENST00000553529 PPIAL4CA0A0B4J2A2 164 aa15.15■□□□□ 0.02
SHMT2-206ENST00000553529 LRRC30A6NM36 301 aa15.15■□□□□ 0.02
SHMT2-206ENST00000553529 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.15■□□□□ 0.02
SHMT2-206ENST00000553529 XRCC2O43543 280 aa15.15■□□□□ 0.02
SHMT2-206ENST00000553529 GMDSO60547 372 aa15.15■□□□□ 0.02
SHMT2-206ENST00000553529 SFTPBP07988 381 aa15.15■□□□□ 0.02
SHMT2-206ENST00000553529 SELLP14151 372 aa15.15■□□□□ 0.02
SHMT2-206ENST00000553529 IRF2P14316 349 aa15.15■□□□□ 0.02
SHMT2-206ENST00000553529 PAICSP22234 425 aaKnown RBP15.15■□□□□ 0.02
SHMT2-206ENST00000553529 PSMB10P40306 273 aa15.15■□□□□ 0.02
SHMT2-206ENST00000553529 GK3PQ14409 553 aa15.15■□□□□ 0.02
SHMT2-206ENST00000553529 RUSC1-AS1Q66K80 236 aa15.15■□□□□ 0.02
SHMT2-206ENST00000553529 CELF2-AS1Q8N7Q2 184 aa15.15■□□□□ 0.02
SHMT2-206ENST00000553529 OR8B3Q8NGG8 313 aa15.15■□□□□ 0.02
SHMT2-206ENST00000553529 TECTBQ96PL2 329 aa15.15■□□□□ 0.02
SHMT2-206ENST00000553529 OR8B2Q96RD0 313 aa15.15■□□□□ 0.02
SHMT2-206ENST00000553529 PAPOLGQ9BWT3 736 aaKnown RBP15.15■□□□□ 0.02
SHMT2-206ENST00000553529 MIOXQ9UGB7 285 aa15.15■□□□□ 0.02
SHMT2-206ENST00000553529 ZNF850A8MQ14 1090 aa15.14■□□□□ 0.01
SHMT2-206ENST00000553529 LGALS8O00214 317 aa15.14■□□□□ 0.01
SHMT2-206ENST00000553529 APOL3O95236 402 aa15.14■□□□□ 0.01
SHMT2-206ENST00000553529 ALOX5APP20292 161 aa15.14■□□□□ 0.01
SHMT2-206ENST00000553529 GATA3P23771 443 aa15.14■□□□□ 0.01
SHMT2-206ENST00000553529 SLC15A1P46059 708 aa15.14■□□□□ 0.01
SHMT2-206ENST00000553529 DLX1P56177 255 aa15.14■□□□□ 0.01
SHMT2-206ENST00000553529 ATP6AP1Q15904 470 aa15.14■□□□□ 0.01
SHMT2-206ENST00000553529 TUSC1Q2TAM9 212 aa15.14■□□□□ 0.01
SHMT2-206ENST00000553529 BRD3OSQ6XYD6 125 aa15.14■□□□□ 0.01
SHMT2-206ENST00000553529 DCDC5Q6ZRR9 648 aa15.14■□□□□ 0.01
SHMT2-206ENST00000553529 SHFQ7M4L6 423 aa15.14■□□□□ 0.01
SHMT2-206ENST00000553529 C1orf87Q8N0U7 546 aa15.14■□□□□ 0.01
SHMT2-206ENST00000553529 PARP8Q8N3A8 854 aa15.14■□□□□ 0.01
SHMT2-206ENST00000553529 OR1M1Q8NGA1 313 aa15.14■□□□□ 0.01
SHMT2-206ENST00000553529 OR5K1Q8NHB7 308 aa15.14■□□□□ 0.01
SHMT2-206ENST00000553529 LRRC29Q8WV35 223 aa15.14■□□□□ 0.01
SHMT2-206ENST00000553529 HPSE2Q8WWQ2 592 aa15.14■□□□□ 0.01
SHMT2-206ENST00000553529 RAB40AQ8WXH6 277 aa15.14■□□□□ 0.01
SHMT2-206ENST00000553529 PLEKHA8Q96JA3 519 aa15.14■□□□□ 0.01
SHMT2-206ENST00000553529 NUDT16L1Q9BRJ7 211 aaKnown RBP15.14■□□□□ 0.01
SHMT2-206ENST00000553529 CLN8Q9UBY8 286 aa15.14■□□□□ 0.01
SHMT2-206ENST00000553529 NUP50Q9UKX7 468 aa15.14■□□□□ 0.01
SHMT2-206ENST00000553529 ANKRD30BLA7E2S9 258 aa15.13■□□□□ 0.01
SHMT2-206ENST00000553529 PRODHO43272 600 aa15.13■□□□□ 0.01
SHMT2-206ENST00000553529 ADAM20O43506 726 aa15.13■□□□□ 0.01
SHMT2-206ENST00000553529 HMGN1P05114 100 aa15.13■□□□□ 0.01
SHMT2-206ENST00000553529 AMY2BP19961 511 aa15.13■□□□□ 0.01
SHMT2-206ENST00000553529 BLVRAP53004 296 aa15.13■□□□□ 0.01
SHMT2-206ENST00000553529 PSMA6P60900 246 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms