RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 COPS3Q9UNS2 423 aa19.94■□□□□ 0.78
TDP1-205ENST00000553527 ARHGAP32A7KAX9 2087 aa19.94■□□□□ 0.78
TDP1-205ENST00000553527 F5H5P2 479 aa19.93■□□□□ 0.78
TDP1-205ENST00000553527 TBX1O43435 398 aa19.93■□□□□ 0.78
TDP1-205ENST00000553527 H2BFMP0C1H6 154 aa19.93■□□□□ 0.78
TDP1-205ENST00000553527 OR2T7P0C7T2 308 aa19.93■□□□□ 0.78
TDP1-205ENST00000553527 FAM157CP0CG43 387 aa19.93■□□□□ 0.78
TDP1-205ENST00000553527 SLC15A1P46059 708 aa19.93■□□□□ 0.78
TDP1-205ENST00000553527 GRB2P62993 217 aaKnown RBP19.93■□□□□ 0.78
TDP1-205ENST00000553527 ACTC1P68032 377 aa19.93■□□□□ 0.78
TDP1-205ENST00000553527 ACTA1P68133 377 aa19.93■□□□□ 0.78
TDP1-205ENST00000553527 GLYATL3Q5SZD4 288 aa19.93■□□□□ 0.78
TDP1-205ENST00000553527 KCTD18Q6PI47 426 aaPredicted RBP19.93■□□□□ 0.78
TDP1-205ENST00000553527 RFLNBQ8N5W9 214 aa19.93■□□□□ 0.78
TDP1-205ENST00000553527 OR2T27Q8NH04 317 aa19.93■□□□□ 0.78
TDP1-205ENST00000553527 ZNF420Q8TAQ5 688 aaPredicted RBP19.93■□□□□ 0.78
TDP1-205ENST00000553527 LGALS12Q96DT0 336 aa19.93■□□□□ 0.78
TDP1-205ENST00000553527 TTTY10Q9BZA0 68 aa19.93■□□□□ 0.78
TDP1-205ENST00000553527 Q9H521 79 aa19.93■□□□□ 0.78
TDP1-205ENST00000553527 NPTNQ9Y639 398 aa19.93■□□□□ 0.78
TDP1-205ENST00000553527 GGT3PA6NGU5 568 aa19.92■□□□□ 0.78
TDP1-205ENST00000553527 MLNRO43193 412 aa19.92■□□□□ 0.78
TDP1-205ENST00000553527 IFNA2P01563 188 aa19.92■□□□□ 0.78
TDP1-205ENST00000553527 ANXA2P07355 339 aaKnown RBP19.92■□□□□ 0.78
TDP1-205ENST00000553527 HNF1AP20823 631 aa19.92■□□□□ 0.78
TDP1-205ENST00000553527 OTX1P32242 354 aaPredicted RBP19.92■□□□□ 0.78
TDP1-205ENST00000553527 OPRL1P41146 370 aa19.92■□□□□ 0.78
TDP1-205ENST00000553527 CX3CR1P49238 355 aa19.92■□□□□ 0.78
TDP1-205ENST00000553527 CXCR4P61073 352 aa19.92■□□□□ 0.78
TDP1-205ENST00000553527 RAB40BQ12829 278 aa19.92■□□□□ 0.78
TDP1-205ENST00000553527 KRT77Q7Z794 578 aa19.92■□□□□ 0.78
TDP1-205ENST00000553527 GLCCI1Q86VQ1 547 aa19.92■□□□□ 0.78
TDP1-205ENST00000553527 MEGF10Q96KG7 1140 aa19.92■□□□□ 0.78
TDP1-205ENST00000553527 CNBD2Q96M20 576 aa19.92■□□□□ 0.78
TDP1-205ENST00000553527 BRD7Q9NPI1 651 aa19.92■□□□□ 0.78
TDP1-205ENST00000553527 HIF1ANQ9NWT6 349 aa19.92■□□□□ 0.78
TDP1-205ENST00000553527 PCDHGB1Q9Y5G3 927 aa19.92■□□□□ 0.78
TDP1-205ENST00000553527 CUBNO60494 3623 aa19.92■□□□□ 0.78
TDP1-205ENST00000553527 MSMBP08118 114 aa19.91■□□□□ 0.78
TDP1-205ENST00000553527 SRD5A1P18405 259 aa19.91■□□□□ 0.78
TDP1-205ENST00000553527 SRP9P49458 86 aaKnown RBP19.91■□□□□ 0.78
TDP1-205ENST00000553527 DVL1P1P54792 670 aaPredicted RBP19.91■□□□□ 0.78
TDP1-205ENST00000553527 KLHL22Q53GT1 634 aa19.91■□□□□ 0.78
TDP1-205ENST00000553527 ZNF322Q6U7Q0 402 aaPredicted RBP19.91■□□□□ 0.78
TDP1-205ENST00000553527 LRRN1Q6UXK5 716 aa19.91■□□□□ 0.78
TDP1-205ENST00000553527 RHOUQ7L0Q8 258 aa19.91■□□□□ 0.78
TDP1-205ENST00000553527 HIST2H2ABQ8IUE6 130 aaPredicted RBP19.91■□□□□ 0.78
TDP1-205ENST00000553527 TMEM186Q96B77 213 aa19.91■□□□□ 0.78
TDP1-205ENST00000553527 RAB39BQ96DA2 213 aa19.91■□□□□ 0.78
TDP1-205ENST00000553527 GCM1Q9NP62 436 aa19.91■□□□□ 0.78
TDP1-205ENST00000553527 IKZF2Q9UKS7 526 aa19.91■□□□□ 0.78
TDP1-205ENST00000553527 EXOGQ9Y2C4 368 aaKnown RBP19.91■□□□□ 0.78
TDP1-205ENST00000553527 A0A1W2PQL4 384 aaPredicted RBP19.9■□□□□ 0.78
TDP1-205ENST00000553527 IRGMA1A4Y4 181 aa19.9■□□□□ 0.78
TDP1-205ENST00000553527 CD300LBA8K4G0 201 aa19.9■□□□□ 0.78
TDP1-205ENST00000553527 FAM20BO75063 409 aa19.9■□□□□ 0.78
TDP1-205ENST00000553527 FADS2O95864 444 aaKnown RBP19.9■□□□□ 0.78
TDP1-205ENST00000553527 OR51F2Q8NH61 342 aa19.9■□□□□ 0.78
TDP1-205ENST00000553527 OR8B4Q96RC9 309 aa19.9■□□□□ 0.78
TDP1-205ENST00000553527 MROQ9BYG7 248 aa19.9■□□□□ 0.78
TDP1-205ENST00000553527 PCDHB10Q9UN67 800 aa19.9■□□□□ 0.78
TDP1-205ENST00000553527 LRP12Q9Y561 859 aa19.9■□□□□ 0.78
TDP1-205ENST00000553527 WNK2Q9Y3S1 2297 aa19.9■□□□□ 0.78
TDP1-205ENST00000553527 PRR32B1ATL7 298 aa19.89■□□□□ 0.77
TDP1-205ENST00000553527 J3QRE1 110 aa19.89■□□□□ 0.77
TDP1-205ENST00000553527 PSMD9O00233 223 aa19.89■□□□□ 0.77
TDP1-205ENST00000553527 ZNF205O95201 554 aa19.89■□□□□ 0.77
TDP1-205ENST00000553527 IGHV2-5P01817 119 aa19.89■□□□□ 0.77
TDP1-205ENST00000553527 CA6P23280 308 aa19.89■□□□□ 0.77
TDP1-205ENST00000553527 ROM1Q03395 351 aa19.89■□□□□ 0.77
TDP1-205ENST00000553527 EGR3Q06889 387 aa19.89■□□□□ 0.77
TDP1-205ENST00000553527 LAIR2Q6ISS4 152 aa19.89■□□□□ 0.77
TDP1-205ENST00000553527 FAHD2BQ6P2I3 314 aaPredicted RBP19.89■□□□□ 0.77
TDP1-205ENST00000553527 FAM57BQ71RH2 274 aa19.89■□□□□ 0.77
TDP1-205ENST00000553527 MOGAT3Q86VF5 341 aa19.89■□□□□ 0.77
TDP1-205ENST00000553527 BPIFB6Q8NFQ5 453 aa19.89■□□□□ 0.77
TDP1-205ENST00000553527 FAHD2AQ96GK7 314 aa19.89■□□□□ 0.77
TDP1-205ENST00000553527 REPIN1Q9BWE0 567 aaKnown RBP19.89■□□□□ 0.77
TDP1-205ENST00000553527 MRPS18AQ9NVS2 196 aaKnown RBP19.89■□□□□ 0.77
TDP1-205ENST00000553527 DAPL1A0PJW8 107 aa19.88■□□□□ 0.77
TDP1-205ENST00000553527 PLPP2O43688 288 aa19.88■□□□□ 0.77
TDP1-205ENST00000553527 CYB5R3P00387 301 aaPredicted RBP19.88■□□□□ 0.77
TDP1-205ENST00000553527 APOC1P02654 83 aa19.88■□□□□ 0.77
TDP1-205ENST00000553527 SRP14P37108 136 aaKnown RBP19.88■□□□□ 0.77
TDP1-205ENST00000553527 ZNF121P58317 390 aaPredicted RBP19.88■□□□□ 0.77
TDP1-205ENST00000553527 OR8G1Q15617 311 aa19.88■□□□□ 0.77
TDP1-205ENST00000553527 GFOD2Q3B7J2 385 aa19.88■□□□□ 0.77
TDP1-205ENST00000553527 DEGS2Q6QHC5 323 aa19.88■□□□□ 0.77
TDP1-205ENST00000553527 SSX6Q7RTT6 188 aa19.88■□□□□ 0.77
TDP1-205ENST00000553527 ZNF679Q8IYX0 411 aa19.88■□□□□ 0.77
TDP1-205ENST00000553527 ACBD7Q8N6N7 88 aa19.88■□□□□ 0.77
TDP1-205ENST00000553527 OR52I1Q8NGK6 324 aa19.88■□□□□ 0.77
TDP1-205ENST00000553527 DVL3Q92997 716 aaPredicted RBP19.88■□□□□ 0.77
TDP1-205ENST00000553527 NIPAL2Q9H841 368 aa19.88■□□□□ 0.77
TDP1-205ENST00000553527 TMEM178BH3BS89 294 aa19.87■□□□□ 0.77
TDP1-205ENST00000553527 XPNPEP2O43895 674 aa19.87■□□□□ 0.77
TDP1-205ENST00000553527 ZNF254O75437 659 aa19.87■□□□□ 0.77
TDP1-205ENST00000553527 IGHV2-70P01814 119 aa19.87■□□□□ 0.77
TDP1-205ENST00000553527 KRT8P05787 483 aa19.87■□□□□ 0.77
TDP1-205ENST00000553527 MMP16P51512 607 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms