RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 POLQO75417 2590 aa4.03□□□□□ -1.77
ATXN3-220ENST00000553491 MYO9AB2RTY4 2548 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 TACC2O95359 2948 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 IGHV1-18A0A0C4DH31 117 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 IGHV4-28A0A0C4DH34 117 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 A0A1W2PPR1 153 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 A0A1W2PRQ8 180 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 DHRS12A0PJE2 317 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 E7EQL1 145 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 ATP6V1G2-DDX39BF2Z307 99 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 H3BN98 237 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 ENTPD5O75356 428 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 UBL3O95164 117 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 SOX14O95416 240 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 CD14P08571 375 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 IGFBP1P08833 259 aaPredicted RBP4.02□□□□□ -1.77
ATXN3-220ENST00000553491 PGA4P0DJD7 388 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 PGA3P0DJD8 388 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 CCL2P13500 99 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 CBR1P16152 277 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 ANXA7P20073 488 aaKnown RBP4.02□□□□□ -1.77
ATXN3-220ENST00000553491 COX5AP20674 150 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 SLC6A6P31641 620 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 APLNRP35414 380 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 ARR3P36575 388 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 CDKN1AP38936 164 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 SLC15A1P46059 708 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 OMPP47874 163 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 PCYT1AP49585 367 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 NUDT6P53370 316 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 ATP5J2P56134 94 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 FHL1Q13642 323 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 DGCR6Q14129 220 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 RAB35Q15286 201 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 MICAQ29983 383 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 DEFB113Q30KQ7 82 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 RFX4Q33E94 735 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 ALKBH6Q3KRA9 238 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 ANKDD1AQ495B1 522 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 SLC36A2Q495M3 483 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 ZNF672Q499Z4 452 aaPredicted RBP4.02□□□□□ -1.77
ATXN3-220ENST00000553491 THEM4Q5T1C6 240 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 AGAP6Q5VW22 663 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 LCN8Q6JVE9 175 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 KRT80Q6KB66 452 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 C1orf94Q6P1W5 598 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 LEG1Q6P5S2 330 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 DPY19L2P2Q6ZN68 376 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 SSX8Q7RTT4 187 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 PIWIL3Q7Z3Z3 882 aaKnown RBP4.02□□□□□ -1.77
ATXN3-220ENST00000553491 ZER1Q7Z7L7 766 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 CCDC36Q8IYA8 594 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 C10orf67Q8IYJ2 551 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 C17orf78Q8N4C9 275 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 LINC00471Q8N535 108 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 ARIH2OSQ8N7S6 290 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 AQP11Q8NBQ7 271 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 ACBD4Q8NC06 268 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 NOXO1Q8NFA2 376 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 OR9Q2Q8NGE9 314 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 OR52L1Q8NGH7 329 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 OR52E2Q8NGJ4 325 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 LILRB1Q8NHL6 650 aaPredicted RBP4.02□□□□□ -1.77
ATXN3-220ENST00000553491 FGFBP3Q8TAT2 258 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 FANK1Q8TC84 345 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 TSPAN32Q96QS1 320 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 ZNF426Q9BUY5 554 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 TSSK6Q9BXA6 273 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 FAM234AQ9H0X4 552 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 SEMA6AQ9H2E6 1030 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 OR52D1Q9H346 318 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 FN3KQ9H479 309 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 ANKRD19PQ9H560 264 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 MAGIXQ9H6Y5 334 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 EGLN3Q9H6Z9 239 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 CDH20Q9HBT6 801 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 FAIMQ9NVQ4 179 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 TMEM38BQ9NVV0 291 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 EIF3KQ9UBQ5 218 aaKnown RBP4.02□□□□□ -1.77
ATXN3-220ENST00000553491 FZR1Q9UM11 496 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 POMPQ9Y244 141 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 POLR1DQ9Y2S0 133 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 CMAHPQ9Y471 501 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 ARHGAP32A7KAX9 2087 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 PDZD2O15018 2839 aa4.02□□□□□ -1.77
ATXN3-220ENST00000553491 MAP1AP78559 2803 aaPredicted RBP4.02□□□□□ -1.77
ATXN3-220ENST00000553491 A8MV72 311 aaPredicted RBP4.01□□□□□ -1.77
ATXN3-220ENST00000553491 SHISA9B4DS77 424 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 H3BNX3 289 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 RPL36A-HNRNPH2H7BZ11 118 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 PDLIM1O00151 329 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 IMPA2O14732 288 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 ACOT8O14734 319 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 ADAM20O43506 726 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 SSX4O60224 188 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 FKBP6O75344 327 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 KHDRBS3O75525 346 aaKnown RBP4.01□□□□□ -1.77
ATXN3-220ENST00000553491 GOSR1O95249 250 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 MPZL1O95297 269 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 BAG2O95816 211 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms